RNA–Protein interactions for RNA: ENST00000571018.5

TVP23B-204, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 2

Gene TVP23B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-204ENST00000571018 PPP1R2P3Q6NXS1 205 aa13.07□□□□□ -0.32
TVP23B-204ENST00000571018 LRSAM1Q6UWE0 723 aa13.07□□□□□ -0.32
TVP23B-204ENST00000571018 C14orf80Q86SX3 495 aa13.07□□□□□ -0.32
TVP23B-204ENST00000571018 METTL3Q86U44 580 aaKnown RBP13.07□□□□□ -0.32
TVP23B-204ENST00000571018 KIAA2013Q8IYS2 634 aa13.07□□□□□ -0.32
TVP23B-204ENST00000571018 ZNF683Q8IZ20 524 aa13.07□□□□□ -0.32
TVP23B-204ENST00000571018 MCOLN2Q8IZK6 566 aa13.07□□□□□ -0.32
TVP23B-204ENST00000571018 FRMD1Q8N878 549 aa13.07□□□□□ -0.32
TVP23B-204ENST00000571018 IQCDQ96DY2 449 aa13.07□□□□□ -0.32
TVP23B-204ENST00000571018 ERLEC1Q96DZ1 483 aa13.07□□□□□ -0.32
TVP23B-204ENST00000571018 VCPIP1Q96JH7 1222 aa13.07□□□□□ -0.32
TVP23B-204ENST00000571018 SPACA7Q96KW9 195 aa13.07□□□□□ -0.32
TVP23B-204ENST00000571018 SELENOOQ9BVL4 669 aa13.07□□□□□ -0.32
TVP23B-204ENST00000571018 MKRN2Q9H000 416 aaKnown RBP13.07□□□□□ -0.32
TVP23B-204ENST00000571018 PARD6AQ9NPB6 346 aa13.07□□□□□ -0.32
TVP23B-204ENST00000571018 IFNKQ9P0W0 207 aa13.07□□□□□ -0.32
TVP23B-204ENST00000571018 PCDHGA5Q9Y5G8 931 aa13.07□□□□□ -0.32
TVP23B-204ENST00000571018 MYO18AQ92614 2054 aaKnown RBP13.07□□□□□ -0.32
TVP23B-204ENST00000571018 DRGXA6NNA5 263 aa13.06□□□□□ -0.32
TVP23B-204ENST00000571018 MOCS3O95396 460 aa13.06□□□□□ -0.32
TVP23B-204ENST00000571018 GJB6O95452 261 aa13.06□□□□□ -0.32
TVP23B-204ENST00000571018 EPHX1P07099 455 aa13.06□□□□□ -0.32
TVP23B-204ENST00000571018 HLA-EP13747 358 aa13.06□□□□□ -0.32
TVP23B-204ENST00000571018 IRAK1P51617 712 aa13.06□□□□□ -0.32
TVP23B-204ENST00000571018 PLK1P53350 603 aa13.06□□□□□ -0.32
TVP23B-204ENST00000571018 OXCT1P55809 520 aa13.06□□□□□ -0.32
TVP23B-204ENST00000571018 KLHL30Q0D2K2 578 aa13.06□□□□□ -0.32
TVP23B-204ENST00000571018 CAMK2GQ13555 558 aaPredicted RBP13.06□□□□□ -0.32
TVP23B-204ENST00000571018 C15orf59Q2T9L4 293 aaPredicted RBP13.06□□□□□ -0.32
TVP23B-204ENST00000571018 PLEKHG6Q3KR16 790 aa13.06□□□□□ -0.32
TVP23B-204ENST00000571018 FNDC3BQ53EP0 1204 aaKnown RBP13.06□□□□□ -0.32
TVP23B-204ENST00000571018 CXorf57Q6NSI4 855 aaKnown RBP13.06□□□□□ -0.32
TVP23B-204ENST00000571018 WDR59Q6PJI9 974 aa13.06□□□□□ -0.32
TVP23B-204ENST00000571018 STRADAQ7RTN6 431 aa13.06□□□□□ -0.32
TVP23B-204ENST00000571018 ZNF571Q7Z3V5 609 aaPredicted RBP13.06□□□□□ -0.32
TVP23B-204ENST00000571018 CIR1Q86X95 450 aaPredicted RBP13.06□□□□□ -0.32
TVP23B-204ENST00000571018 FAM131BQ86XD5 332 aa13.06□□□□□ -0.32
TVP23B-204ENST00000571018 TMPRSS6Q8IU80 811 aa13.06□□□□□ -0.32
TVP23B-204ENST00000571018 APCDD1Q8J025 514 aa13.06□□□□□ -0.32
TVP23B-204ENST00000571018 KDM1BQ8NB78 822 aa13.06□□□□□ -0.32
TVP23B-204ENST00000571018 CENPIQ92674 756 aaPredicted RBP13.06□□□□□ -0.32
TVP23B-204ENST00000571018 MYO19Q96H55 970 aa13.06□□□□□ -0.32
TVP23B-204ENST00000571018 MRGPRX3Q96LB0 322 aa13.06□□□□□ -0.32
TVP23B-204ENST00000571018 HAPLN3Q96S86 360 aa13.06□□□□□ -0.32
TVP23B-204ENST00000571018 SLC6A17Q9H1V8 727 aa13.06□□□□□ -0.32
TVP23B-204ENST00000571018 ARRDC1-AS1Q9H2J1 176 aa13.06□□□□□ -0.32
TVP23B-204ENST00000571018 TSPY26PQ9H489 355 aa13.06□□□□□ -0.32
TVP23B-204ENST00000571018 PRDM16Q9HAZ2 1276 aa13.06□□□□□ -0.32
TVP23B-204ENST00000571018 TMPRSS4Q9NRS4 437 aa13.06□□□□□ -0.32
TVP23B-204ENST00000571018 SEMA4GQ9NTN9 838 aa13.06□□□□□ -0.32
TVP23B-204ENST00000571018 TAS2R14Q9NYV8 317 aa13.06□□□□□ -0.32
TVP23B-204ENST00000571018 MBD1Q9UIS9 605 aaPredicted RBP13.06□□□□□ -0.32
TVP23B-204ENST00000571018 MYO15AQ9UKN7 3530 aa13.05□□□□□ -0.32
TVP23B-204ENST00000571018 IGLV3-10A0A075B6K4 115 aa13.05□□□□□ -0.32
TVP23B-204ENST00000571018 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.05□□□□□ -0.32
TVP23B-204ENST00000571018 CLDN11O75508 207 aa13.05□□□□□ -0.32
TVP23B-204ENST00000571018 SRPRAP08240 638 aaKnown RBP13.05□□□□□ -0.32
TVP23B-204ENST00000571018 GZMAP12544 262 aa13.05□□□□□ -0.32
TVP23B-204ENST00000571018 GPD1P21695 349 aa13.05□□□□□ -0.32
TVP23B-204ENST00000571018 RRM1P23921 792 aa13.05□□□□□ -0.32
TVP23B-204ENST00000571018 ADRA1BP35368 520 aa13.05□□□□□ -0.32
TVP23B-204ENST00000571018 COPAP53621 1224 aa13.05□□□□□ -0.32
TVP23B-204ENST00000571018 CDH4P55283 916 aa13.05□□□□□ -0.32
TVP23B-204ENST00000571018 ST8SIA6P61647 398 aa13.05□□□□□ -0.32
TVP23B-204ENST00000571018 ZBED6P86452 979 aa13.05□□□□□ -0.32
TVP23B-204ENST00000571018 ZNF177Q13360 481 aaPredicted RBP13.05□□□□□ -0.32
TVP23B-204ENST00000571018 CSRP2Q16527 193 aa13.05□□□□□ -0.32
TVP23B-204ENST00000571018 CDO1Q16878 200 aa13.05□□□□□ -0.32
TVP23B-204ENST00000571018 RAB6CQ53S08 254 aa13.05□□□□□ -0.32
TVP23B-204ENST00000571018 SPDYCQ5MJ68 293 aa13.05□□□□□ -0.32
TVP23B-204ENST00000571018 ARTNQ5T4W7 220 aa13.05□□□□□ -0.32
TVP23B-204ENST00000571018 SH3PXD2AQ5TCZ1 1133 aa13.05□□□□□ -0.32
TVP23B-204ENST00000571018 DNAJC24Q6P3W2 148 aa13.05□□□□□ -0.32
TVP23B-204ENST00000571018 KIAA1324Q6UXG2 1013 aaKnown RBP13.05□□□□□ -0.32
TVP23B-204ENST00000571018 LRRC31Q6UY01 552 aa13.05□□□□□ -0.32
TVP23B-204ENST00000571018 SLC36A4Q6YBV0 504 aa13.05□□□□□ -0.32
TVP23B-204ENST00000571018 OR2T3Q8NH03 318 aa13.05□□□□□ -0.32
TVP23B-204ENST00000571018 SYN2Q92777 582 aaPredicted RBP13.05□□□□□ -0.32
TVP23B-204ENST00000571018 ALG14Q96F25 216 aa13.05□□□□□ -0.32
TVP23B-204ENST00000571018 PPP1R9BQ96SB3 815 aa13.05□□□□□ -0.32
TVP23B-204ENST00000571018 XPO4Q9C0E2 1151 aaKnown RBP13.05□□□□□ -0.32
TVP23B-204ENST00000571018 RAB6CQ9H0N0 254 aa13.05□□□□□ -0.32
TVP23B-204ENST00000571018 ITM2CQ9NQX7 267 aa13.05□□□□□ -0.32
TVP23B-204ENST00000571018 SUN2Q9UH99 717 aa13.05□□□□□ -0.32
TVP23B-204ENST00000571018 CAPN11Q9UMQ6 739 aa13.05□□□□□ -0.32
TVP23B-204ENST00000571018 USP18Q9UMW8 372 aa13.05□□□□□ -0.32
TVP23B-204ENST00000571018 ERVW-1Q9UQF0 538 aa13.05□□□□□ -0.32
TVP23B-204ENST00000571018 TBC1D30Q9Y2I9 924 aa13.05□□□□□ -0.32
TVP23B-204ENST00000571018 PCDHGA4Q9Y5G9 962 aa13.05□□□□□ -0.32
TVP23B-204ENST00000571018 SNX10Q9Y5X0 201 aa13.05□□□□□ -0.32
TVP23B-204ENST00000571018 OTOGLQ3ZCN5 2332 aa13.05□□□□□ -0.32
TVP23B-204ENST00000571018 MUC22E2RYF6 1773 aaPredicted RBP13.04□□□□□ -0.32
TVP23B-204ENST00000571018 IGHV1OR15-9A0A0B4J2B8 117 aa13.04□□□□□ -0.32
TVP23B-204ENST00000571018 BCLAF3A2AJT9 711 aaKnown RBP13.04□□□□□ -0.32
TVP23B-204ENST00000571018 E9PAM4 449 aa13.04□□□□□ -0.32
TVP23B-204ENST00000571018 DDX3XO00571 662 aaKnown RBP eCLIP13.04□□□□□ -0.32
TVP23B-204ENST00000571018 FOXD2O60548 495 aaPredicted RBP13.04□□□□□ -0.32
TVP23B-204ENST00000571018 CNTN5O94779 1100 aa13.04□□□□□ -0.32
TVP23B-204ENST00000571018 TPM3P06753 285 aa13.04□□□□□ -0.32
TVP23B-204ENST00000571018 SKILP12757 684 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms