RNA–Protein interactions for RNA: ENST00000570828.5

CTDNEP1-205, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 986 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-205ENST00000570828 COX16Q9P0S2 106 aa12.79□□□□□ -0.36
CTDNEP1-205ENST00000570828 SUN2Q9UH99 717 aa12.79□□□□□ -0.36
CTDNEP1-205ENST00000570828 ANGPTL2Q9UKU9 493 aa12.79□□□□□ -0.36
CTDNEP1-205ENST00000570828 NFE2L3Q9Y4A8 694 aa12.79□□□□□ -0.36
CTDNEP1-205ENST00000570828 FHOD1Q9Y613 1164 aa12.79□□□□□ -0.36
CTDNEP1-205ENST00000570828 PLXND1Q9Y4D7 1925 aa12.79□□□□□ -0.36
CTDNEP1-205ENST00000570828 KCNU1A8MYU2 1149 aa12.78□□□□□ -0.36
CTDNEP1-205ENST00000570828 OPHN1O60890 802 aa12.78□□□□□ -0.36
CTDNEP1-205ENST00000570828 DAB1O75553 588 aa12.78□□□□□ -0.36
CTDNEP1-205ENST00000570828 GRAP2O75791 330 aa12.78□□□□□ -0.36
CTDNEP1-205ENST00000570828 DNTTP04053 509 aa12.78□□□□□ -0.36
CTDNEP1-205ENST00000570828 ERBB2P04626 1255 aa12.78□□□□□ -0.36
CTDNEP1-205ENST00000570828 CEACAM1P13688 526 aa12.78□□□□□ -0.36
CTDNEP1-205ENST00000570828 PMLP29590 882 aa12.78□□□□□ -0.36
CTDNEP1-205ENST00000570828 CLCN1P35523 988 aa12.78□□□□□ -0.36
CTDNEP1-205ENST00000570828 PRSS12P56730 875 aa12.78□□□□□ -0.36
CTDNEP1-205ENST00000570828 ZBTB16Q05516 673 aa12.78□□□□□ -0.36
CTDNEP1-205ENST00000570828 ZNF252P-AS1Q0IIN9 211 aa12.78□□□□□ -0.36
CTDNEP1-205ENST00000570828 DRAP1Q14919 205 aaPredicted RBP12.78□□□□□ -0.36
CTDNEP1-205ENST00000570828 PTPN20Q4JDL3 420 aa12.78□□□□□ -0.36
CTDNEP1-205ENST00000570828 TCP11X2Q5H9J9 407 aa12.78□□□□□ -0.36
CTDNEP1-205ENST00000570828 PITRM1Q5JRX3 1037 aa12.78□□□□□ -0.36
CTDNEP1-205ENST00000570828 RABGAP1LQ5R372 815 aa12.78□□□□□ -0.36
CTDNEP1-205ENST00000570828 TTC39BQ5VTQ0 682 aaPredicted RBP12.78□□□□□ -0.36
CTDNEP1-205ENST00000570828 DCAF12L1Q5VU92 463 aa12.78□□□□□ -0.36
CTDNEP1-205ENST00000570828 RNF219Q5W0B1 726 aaPredicted RBP12.78□□□□□ -0.36
CTDNEP1-205ENST00000570828 ZNF776Q68DI1 518 aaPredicted RBP12.78□□□□□ -0.36
CTDNEP1-205ENST00000570828 ZCCHC9Q8N567 271 aaKnown RBP12.78□□□□□ -0.36
CTDNEP1-205ENST00000570828 MINDY1Q8N5J2 469 aa12.78□□□□□ -0.36
CTDNEP1-205ENST00000570828 TTC17Q96AE7 1141 aa12.78□□□□□ -0.36
CTDNEP1-205ENST00000570828 LMLNQ96KR4 655 aa12.78□□□□□ -0.36
CTDNEP1-205ENST00000570828 MIR1-1HGQ9H1L0 117 aa12.78□□□□□ -0.36
CTDNEP1-205ENST00000570828 PCED1AQ9H1Q7 454 aa12.78□□□□□ -0.36
CTDNEP1-205ENST00000570828 SLC32A1Q9H598 525 aa12.78□□□□□ -0.36
CTDNEP1-205ENST00000570828 PLCB1Q9NQ66 1216 aa12.78□□□□□ -0.36
CTDNEP1-205ENST00000570828 SAMSN1Q9NSI8 373 aaKnown RBP12.78□□□□□ -0.36
CTDNEP1-205ENST00000570828 LMBRD1Q9NUN5 540 aa12.78□□□□□ -0.36
CTDNEP1-205ENST00000570828 A0A1B0GTW7 788 aa12.77□□□□□ -0.37
CTDNEP1-205ENST00000570828 GIPC1O14908 333 aa12.77□□□□□ -0.37
CTDNEP1-205ENST00000570828 TPM2P07951 284 aa12.77□□□□□ -0.37
CTDNEP1-205ENST00000570828 UCHL3P15374 230 aa12.77□□□□□ -0.37
CTDNEP1-205ENST00000570828 MAOBP27338 520 aa12.77□□□□□ -0.37
CTDNEP1-205ENST00000570828 RPS14P62263 151 aaKnown RBP12.77□□□□□ -0.37
CTDNEP1-205ENST00000570828 SLC6A3Q01959 620 aa12.77□□□□□ -0.37
CTDNEP1-205ENST00000570828 NME3Q13232 169 aa12.77□□□□□ -0.37
CTDNEP1-205ENST00000570828 MTA1Q13330 715 aa12.77□□□□□ -0.37
CTDNEP1-205ENST00000570828 HNRNPA1L2Q32P51 320 aaKnown RBP12.77□□□□□ -0.37
CTDNEP1-205ENST00000570828 FSCBQ5H9T9 825 aa12.77□□□□□ -0.37
CTDNEP1-205ENST00000570828 KLHDC7AQ5VTJ3 777 aa12.77□□□□□ -0.37
CTDNEP1-205ENST00000570828 MMS22LQ6ZRQ5 1243 aa12.77□□□□□ -0.37
CTDNEP1-205ENST00000570828 SLC26A9Q7LBE3 791 aa12.77□□□□□ -0.37
CTDNEP1-205ENST00000570828 ZDHHC17Q8IUH5 632 aa12.77□□□□□ -0.37
CTDNEP1-205ENST00000570828 KDM1BQ8NB78 822 aa12.77□□□□□ -0.37
CTDNEP1-205ENST00000570828 TMEM35BQ8NCS4 154 aa12.77□□□□□ -0.37
CTDNEP1-205ENST00000570828 MSANTD4Q8NCY6 345 aa12.77□□□□□ -0.37
CTDNEP1-205ENST00000570828 DEFB124Q8NES8 71 aa12.77□□□□□ -0.37
CTDNEP1-205ENST00000570828 DNASE2BQ8WZ79 361 aa12.77□□□□□ -0.37
CTDNEP1-205ENST00000570828 SNX19Q92543 992 aa12.77□□□□□ -0.37
CTDNEP1-205ENST00000570828 ZNF775Q96BV0 537 aaPredicted RBP12.77□□□□□ -0.37
CTDNEP1-205ENST00000570828 TAB2Q9NYJ8 693 aa12.77□□□□□ -0.37
CTDNEP1-205ENST00000570828 KIAA1522Q9P206 1035 aaPredicted RBP12.77□□□□□ -0.37
CTDNEP1-205ENST00000570828 INTS6Q9UL03 887 aaKnown RBP12.77□□□□□ -0.37
CTDNEP1-205ENST00000570828 NUP205Q92621 2012 aa12.77□□□□□ -0.37
CTDNEP1-205ENST00000570828 GON4LQ3T8J9 2241 aa12.77□□□□□ -0.37
CTDNEP1-205ENST00000570828 A0A1B0GVM2 712 aa12.76□□□□□ -0.37
CTDNEP1-205ENST00000570828 TCAF2A6NFQ2 919 aa12.76□□□□□ -0.37
CTDNEP1-205ENST00000570828 METTL12A8MUP2 240 aa12.76□□□□□ -0.37
CTDNEP1-205ENST00000570828 GOLGA6L22H0YM25 854 aa12.76□□□□□ -0.37
CTDNEP1-205ENST00000570828 RNASEH1O60930 286 aaKnown RBP12.76□□□□□ -0.37
CTDNEP1-205ENST00000570828 SRPRAP08240 638 aaKnown RBP12.76□□□□□ -0.37
CTDNEP1-205ENST00000570828 CYP11B1P15538 503 aa12.76□□□□□ -0.37
CTDNEP1-205ENST00000570828 GGCXP38435 758 aa12.76□□□□□ -0.37
CTDNEP1-205ENST00000570828 ECT2LQ008S8 904 aa12.76□□□□□ -0.37
CTDNEP1-205ENST00000570828 KCNMA1Q12791 1236 aa12.76□□□□□ -0.37
CTDNEP1-205ENST00000570828 GRIK2Q13002 908 aa12.76□□□□□ -0.37
CTDNEP1-205ENST00000570828 EIF4EBP2Q13542 120 aaPredicted RBP12.76□□□□□ -0.37
CTDNEP1-205ENST00000570828 TAF3Q5VWG9 929 aa12.76□□□□□ -0.37
CTDNEP1-205ENST00000570828 CIR1Q86X95 450 aaPredicted RBP12.76□□□□□ -0.37
CTDNEP1-205ENST00000570828 CCAR2Q8N163 923 aaKnown RBP12.76□□□□□ -0.37
CTDNEP1-205ENST00000570828 ZNF397Q8NF99 534 aaPredicted RBP12.76□□□□□ -0.37
CTDNEP1-205ENST00000570828 ENOX1Q8TC92 643 aaKnown RBP12.76□□□□□ -0.37
CTDNEP1-205ENST00000570828 GANCQ8TET4 914 aa12.76□□□□□ -0.37
CTDNEP1-205ENST00000570828 MYO19Q96H55 970 aa12.76□□□□□ -0.37
CTDNEP1-205ENST00000570828 RPRD1AQ96P16 312 aaPredicted RBP12.76□□□□□ -0.37
CTDNEP1-205ENST00000570828 PRMT1Q99873 361 aaKnown RBP12.76□□□□□ -0.37
CTDNEP1-205ENST00000570828 ZDHHC5Q9C0B5 715 aa12.76□□□□□ -0.37
CTDNEP1-205ENST00000570828 BTBD1Q9H0C5 482 aa12.76□□□□□ -0.37
CTDNEP1-205ENST00000570828 RSPH9Q9H1X1 276 aaPredicted RBP12.76□□□□□ -0.37
CTDNEP1-205ENST00000570828 RRN3Q9NYV6 651 aa12.76□□□□□ -0.37
CTDNEP1-205ENST00000570828 STAP1Q9ULZ2 295 aa12.76□□□□□ -0.37
CTDNEP1-205ENST00000570828 SCML1Q9UN30 329 aa12.76□□□□□ -0.37
CTDNEP1-205ENST00000570828 ERVW-1Q9UQF0 538 aa12.76□□□□□ -0.37
CTDNEP1-205ENST00000570828 MUC22E2RYF6 1773 aaPredicted RBP12.76□□□□□ -0.37
CTDNEP1-205ENST00000570828 UPK3BL1B0FP48 263 aa12.75□□□□□ -0.37
CTDNEP1-205ENST00000570828 UPK3BL2E5RIL1 263 aa12.75□□□□□ -0.37
CTDNEP1-205ENST00000570828 F8VZ95 297 aa12.75□□□□□ -0.37
CTDNEP1-205ENST00000570828 M0QYT0 321 aa12.75□□□□□ -0.37
CTDNEP1-205ENST00000570828 BCAT2O15382 392 aaPredicted RBP12.75□□□□□ -0.37
CTDNEP1-205ENST00000570828 SIN3BO75182 1162 aa12.75□□□□□ -0.37
CTDNEP1-205ENST00000570828 SEMA4FO95754 770 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms