RNA–Protein interactions for RNA: ENST00000569971.5

UBR1-211, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 4

Gene UBR1, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-211ENST00000569971 A8MVJ9 347 aa4.1□□□□□ -1.75
UBR1-211ENST00000569971 AP4M1O00189 453 aa4.1□□□□□ -1.75
UBR1-211ENST00000569971 NKX2-8O15522 239 aa4.1□□□□□ -1.75
UBR1-211ENST00000569971 TSPAN3O60637 253 aa4.1□□□□□ -1.75
UBR1-211ENST00000569971 LPXNO60711 386 aa4.1□□□□□ -1.75
UBR1-211ENST00000569971 RAMP2O60895 175 aa4.1□□□□□ -1.75
UBR1-211ENST00000569971 IL6RP08887 468 aaPredicted RBP4.1□□□□□ -1.75
UBR1-211ENST00000569971 LAG3P18627 525 aa4.1□□□□□ -1.75
UBR1-211ENST00000569971 GKP32189 559 aa4.1□□□□□ -1.75
UBR1-211ENST00000569971 TNNT2P45379 298 aaPredicted RBP4.1□□□□□ -1.75
UBR1-211ENST00000569971 MCM2P49736 904 aa4.1□□□□□ -1.75
UBR1-211ENST00000569971 DGKQP52824 942 aa4.1□□□□□ -1.75
UBR1-211ENST00000569971 PDE1AP54750 535 aa4.1□□□□□ -1.75
UBR1-211ENST00000569971 RBM6P78332 1123 aaKnown RBP4.1□□□□□ -1.75
UBR1-211ENST00000569971 DGCR2P98153 550 aa4.1□□□□□ -1.75
UBR1-211ENST00000569971 ITIH3Q06033 890 aa4.1□□□□□ -1.75
UBR1-211ENST00000569971 CYP1B1Q16678 543 aa4.1□□□□□ -1.75
UBR1-211ENST00000569971 ST3GAL2Q16842 350 aa4.1□□□□□ -1.75
UBR1-211ENST00000569971 SLC45A4Q5BKX6 768 aa4.1□□□□□ -1.75
UBR1-211ENST00000569971 VWA1Q6PCB0 445 aa4.1□□□□□ -1.75
UBR1-211ENST00000569971 KCNV1Q6PIU1 500 aa4.1□□□□□ -1.75
UBR1-211ENST00000569971 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.1□□□□□ -1.75
UBR1-211ENST00000569971 WDR63Q8IWG1 891 aa4.1□□□□□ -1.75
UBR1-211ENST00000569971 FSIP1Q8NA03 581 aa4.1□□□□□ -1.75
UBR1-211ENST00000569971 USP38Q8NB14 1042 aa4.1□□□□□ -1.75
UBR1-211ENST00000569971 LARP4BQ92615 738 aaKnown RBP4.1□□□□□ -1.75
UBR1-211ENST00000569971 CENPIQ92674 756 aaPredicted RBP4.1□□□□□ -1.75
UBR1-211ENST00000569971 FUBP1Q96AE4 644 aaKnown RBP4.1□□□□□ -1.75
UBR1-211ENST00000569971 ZG16BQ96DA0 208 aa4.1□□□□□ -1.75
UBR1-211ENST00000569971 RSPRY1Q96DX4 576 aa4.1□□□□□ -1.75
UBR1-211ENST00000569971 RNF125Q96EQ8 232 aa4.1□□□□□ -1.75
UBR1-211ENST00000569971 MYEOVQ96EZ4 313 aa4.1□□□□□ -1.75
UBR1-211ENST00000569971 VPS50Q96JG6 964 aa4.1□□□□□ -1.75
UBR1-211ENST00000569971 PRR25Q96S07 402 aa4.1□□□□□ -1.75
UBR1-211ENST00000569971 ARHGAP39Q9C0H5 1083 aa4.1□□□□□ -1.75
UBR1-211ENST00000569971 WDR26Q9H7D7 661 aa4.1□□□□□ -1.75
UBR1-211ENST00000569971 ACAD9Q9H845 621 aa4.1□□□□□ -1.75
UBR1-211ENST00000569971 MMRN2Q9H8L6 949 aa4.1□□□□□ -1.75
UBR1-211ENST00000569971 SAP30LQ9HAJ7 183 aa4.1□□□□□ -1.75
UBR1-211ENST00000569971 PLEKHA5Q9HAU0 1116 aa4.1□□□□□ -1.75
UBR1-211ENST00000569971 IL21RQ9HBE5 538 aa4.1□□□□□ -1.75
UBR1-211ENST00000569971 KCNK9Q9NPC2 374 aa4.1□□□□□ -1.75
UBR1-211ENST00000569971 TBCCD1Q9NVR7 557 aa4.1□□□□□ -1.75
UBR1-211ENST00000569971 CEP72Q9P209 647 aa4.1□□□□□ -1.75
UBR1-211ENST00000569971 MGAT4CQ9UBM8 478 aa4.1□□□□□ -1.75
UBR1-211ENST00000569971 NRBP1Q9UHY1 535 aa4.1□□□□□ -1.75
UBR1-211ENST00000569971 TBX20Q9UMR3 447 aa4.1□□□□□ -1.75
UBR1-211ENST00000569971 PCDHB2Q9Y5E7 798 aa4.1□□□□□ -1.75
UBR1-211ENST00000569971 ADGRA2Q96PE1 1338 aa4.1□□□□□ -1.75
UBR1-211ENST00000569971 ABCC11Q96J66 1382 aa4.1□□□□□ -1.75
UBR1-211ENST00000569971 YTHDC2Q9H6S0 1430 aaKnown RBP4.1□□□□□ -1.75
UBR1-211ENST00000569971 MED14O60244 1454 aa4.1□□□□□ -1.75
UBR1-211ENST00000569971 ALKQ9UM73 1620 aa4.1□□□□□ -1.75
UBR1-211ENST00000569971 TBC1D3DA0A087WVF3 549 aa4.09□□□□□ -1.75
UBR1-211ENST00000569971 TBC1D3IA0A087WXS9 549 aa4.09□□□□□ -1.75
UBR1-211ENST00000569971 TBC1D3EA0A087X179 549 aa4.09□□□□□ -1.75
UBR1-211ENST00000569971 TBC1D3KA0A087X1G2 549 aa4.09□□□□□ -1.75
UBR1-211ENST00000569971 TBC1D3BA6NDS4 549 aa4.09□□□□□ -1.75
UBR1-211ENST00000569971 TBC1D3FA6NER0 549 aaPredicted RBP4.09□□□□□ -1.75
UBR1-211ENST00000569971 SAC3D1A6NKF1 404 aa4.09□□□□□ -1.75
UBR1-211ENST00000569971 TBC1D3LB9A6J9 549 aa4.09□□□□□ -1.75
UBR1-211ENST00000569971 CES2O00748 559 aa4.09□□□□□ -1.75
UBR1-211ENST00000569971 SPTLC2O15270 562 aa4.09□□□□□ -1.75
UBR1-211ENST00000569971 SEPT4O43236 478 aa4.09□□□□□ -1.75
UBR1-211ENST00000569971 RTN3O95197 1032 aaPredicted RBP4.09□□□□□ -1.75
UBR1-211ENST00000569971 DDX58O95786 925 aaKnown RBP4.09□□□□□ -1.75
UBR1-211ENST00000569971 CHRM2P08172 466 aa4.09□□□□□ -1.75
UBR1-211ENST00000569971 CSF1P09603 554 aa4.09□□□□□ -1.75
UBR1-211ENST00000569971 TBC1D3HP0C7X1 549 aa4.09□□□□□ -1.75
UBR1-211ENST00000569971 CHN1P15882 459 aa4.09□□□□□ -1.75
UBR1-211ENST00000569971 MMP8P22894 467 aa4.09□□□□□ -1.75
UBR1-211ENST00000569971 PGM1P36871 562 aa4.09□□□□□ -1.75
UBR1-211ENST00000569971 FOXL2P58012 376 aa4.09□□□□□ -1.75
UBR1-211ENST00000569971 E2F1Q01094 437 aa4.09□□□□□ -1.75
UBR1-211ENST00000569971 GUCY1B3Q02153 619 aa4.09□□□□□ -1.75
UBR1-211ENST00000569971 GALNT2Q10471 571 aa4.09□□□□□ -1.75
UBR1-211ENST00000569971 KRT32Q14532 448 aa4.09□□□□□ -1.75
UBR1-211ENST00000569971 TOMM20Q15388 145 aa4.09□□□□□ -1.75
UBR1-211ENST00000569971 CBWD5Q5RIA9 395 aa4.09□□□□□ -1.75
UBR1-211ENST00000569971 HAUS3Q68CZ6 603 aa4.09□□□□□ -1.75
UBR1-211ENST00000569971 TBC1D3GQ6DHY5 549 aa4.09□□□□□ -1.75
UBR1-211ENST00000569971 TBC1D3CQ6IPX1 549 aa4.09□□□□□ -1.75
UBR1-211ENST00000569971 ANO7Q6IWH7 933 aa4.09□□□□□ -1.75
UBR1-211ENST00000569971 DSTYKQ6XUX3 929 aa4.09□□□□□ -1.75
UBR1-211ENST00000569971 TBC1D3Q8IZP1 549 aaPredicted RBP4.09□□□□□ -1.75
UBR1-211ENST00000569971 LNX2Q8N448 690 aa4.09□□□□□ -1.75
UBR1-211ENST00000569971 GALNT4Q8N4A0 578 aa4.09□□□□□ -1.75
UBR1-211ENST00000569971 ANKRD44Q8N8A2 993 aa4.09□□□□□ -1.75
UBR1-211ENST00000569971 CCDC89Q8N998 374 aa4.09□□□□□ -1.75
UBR1-211ENST00000569971 CLEC4CQ8WTT0 213 aa4.09□□□□□ -1.75
UBR1-211ENST00000569971 PGBD1Q96JS3 809 aa4.09□□□□□ -1.75
UBR1-211ENST00000569971 FAR2Q96K12 515 aa4.09□□□□□ -1.75
UBR1-211ENST00000569971 PRAM1Q96QH2 718 aa4.09□□□□□ -1.75
UBR1-211ENST00000569971 PIGSQ96S52 555 aa4.09□□□□□ -1.75
UBR1-211ENST00000569971 CHCHD6Q9BRQ6 235 aa4.09□□□□□ -1.75
UBR1-211ENST00000569971 CYP4F11Q9HBI6 524 aa4.09□□□□□ -1.75
UBR1-211ENST00000569971 SLC2A4RGQ9NR83 387 aa4.09□□□□□ -1.75
UBR1-211ENST00000569971 TLR8Q9NR97 1041 aaKnown RBP4.09□□□□□ -1.75
UBR1-211ENST00000569971 RXFP3Q9NSD7 469 aa4.09□□□□□ -1.75
UBR1-211ENST00000569971 TMLHEQ9NVH6 421 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms