RNA–Protein interactions for RNA: ENST00000569252.5

USB1-215, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 573 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-215ENST00000569252 NADSYN1Q6IA69 706 aa16.52■□□□□ 0.24
USB1-215ENST00000569252 CFAP52Q8N1V2 620 aa16.52■□□□□ 0.24
USB1-215ENST00000569252 CARNMT1Q8N4J0 409 aa16.52■□□□□ 0.24
USB1-215ENST00000569252 SUMF1Q8NBK3 374 aa16.52■□□□□ 0.24
USB1-215ENST00000569252 MSANTD3Q96H12 275 aa16.52■□□□□ 0.24
USB1-215ENST00000569252 SHDQ96IW2 340 aa16.52■□□□□ 0.24
USB1-215ENST00000569252 PRMT1Q99873 361 aaKnown RBP16.52■□□□□ 0.24
USB1-215ENST00000569252 ZYG11BQ9C0D3 744 aa16.52■□□□□ 0.24
USB1-215ENST00000569252 ANLNQ9NQW6 1124 aa16.52■□□□□ 0.24
USB1-215ENST00000569252 TMPRSS4Q9NRS4 437 aa16.52■□□□□ 0.24
USB1-215ENST00000569252 GPATCH2LQ9NWQ4 482 aa16.52■□□□□ 0.24
USB1-215ENST00000569252 PPARGC1AQ9UBK2 798 aaKnown RBP16.52■□□□□ 0.24
USB1-215ENST00000569252 SNX10Q9Y5X0 201 aa16.52■□□□□ 0.24
USB1-215ENST00000569252 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.51■□□□□ 0.23
USB1-215ENST00000569252 CLDN11O75508 207 aa16.51■□□□□ 0.23
USB1-215ENST00000569252 ZRANB2O95218 330 aaKnown RBP eCLIP16.51■□□□□ 0.23
USB1-215ENST00000569252 CYP17A1P05093 508 aa16.51■□□□□ 0.23
USB1-215ENST00000569252 IL1R2P27930 398 aa16.51■□□□□ 0.23
USB1-215ENST00000569252 EPHB2P29323 1055 aa16.51■□□□□ 0.23
USB1-215ENST00000569252 CDH4P55283 916 aa16.51■□□□□ 0.23
USB1-215ENST00000569252 OXCT1P55809 520 aa16.51■□□□□ 0.23
USB1-215ENST00000569252 RWDD2BP57060 319 aa16.51■□□□□ 0.23
USB1-215ENST00000569252 CDH18Q13634 790 aa16.51■□□□□ 0.23
USB1-215ENST00000569252 RPS6KA1Q15418 735 aa16.51■□□□□ 0.23
USB1-215ENST00000569252 SLC44A4Q53GD3 710 aa16.51■□□□□ 0.23
USB1-215ENST00000569252 ZNF569Q5MCW4 686 aa16.51■□□□□ 0.23
USB1-215ENST00000569252 C14orf80Q86SX3 495 aa16.51■□□□□ 0.23
USB1-215ENST00000569252 RCOR2Q8IZ40 523 aa16.51■□□□□ 0.23
USB1-215ENST00000569252 NAT16Q8N8M0 369 aa16.51■□□□□ 0.23
USB1-215ENST00000569252 LRRC57Q8N9N7 239 aa16.51■□□□□ 0.23
USB1-215ENST00000569252 PEBP4Q96S96 227 aa16.51■□□□□ 0.23
USB1-215ENST00000569252 CALN1Q9BXU9 219 aa16.51■□□□□ 0.23
USB1-215ENST00000569252 SLC2A11Q9BYW1 496 aa16.51■□□□□ 0.23
USB1-215ENST00000569252 GOLPH3Q9H4A6 298 aa16.51■□□□□ 0.23
USB1-215ENST00000569252 HPS4Q9NQG7 708 aa16.51■□□□□ 0.23
USB1-215ENST00000569252 SPATA6Q9NWH7 488 aaPredicted RBP16.51■□□□□ 0.23
USB1-215ENST00000569252 PLK2Q9NYY3 685 aa16.51■□□□□ 0.23
USB1-215ENST00000569252 MARK1Q9P0L2 795 aa16.51■□□□□ 0.23
USB1-215ENST00000569252 DEC1Q9P2X7 70 aa16.51■□□□□ 0.23
USB1-215ENST00000569252 PCDHA3Q9Y5H8 950 aa16.51■□□□□ 0.23
USB1-215ENST00000569252 HELZP42694 1942 aaKnown RBP16.51■□□□□ 0.23
USB1-215ENST00000569252 DRGXA6NNA5 263 aa16.5■□□□□ 0.23
USB1-215ENST00000569252 MAN2B1O00754 1011 aa16.5■□□□□ 0.23
USB1-215ENST00000569252 FGF10O15520 208 aaPredicted RBP16.5■□□□□ 0.23
USB1-215ENST00000569252 HOXC11O43248 304 aaPredicted RBP16.5■□□□□ 0.23
USB1-215ENST00000569252 LRIG2O94898 1065 aa16.5■□□□□ 0.23
USB1-215ENST00000569252 FTCDO95954 541 aa16.5■□□□□ 0.23
USB1-215ENST00000569252 KRT1P04264 644 aa16.5■□□□□ 0.23
USB1-215ENST00000569252 TCF4P15884 667 aa16.5■□□□□ 0.23
USB1-215ENST00000569252 GJA4P35212 333 aa16.5■□□□□ 0.23
USB1-215ENST00000569252 GGCXP38435 758 aa16.5■□□□□ 0.23
USB1-215ENST00000569252 HCAR3P49019 387 aa16.5■□□□□ 0.23
USB1-215ENST00000569252 DPYSL2Q16555 572 aa16.5■□□□□ 0.23
USB1-215ENST00000569252 NT5DC3Q86UY8 548 aa16.5■□□□□ 0.23
USB1-215ENST00000569252 RALGPS2Q86X27 583 aaPredicted RBP16.5■□□□□ 0.23
USB1-215ENST00000569252 CCDC50Q8IVM0 306 aa16.5■□□□□ 0.23
USB1-215ENST00000569252 MFN1Q8IWA4 741 aa16.5■□□□□ 0.23
USB1-215ENST00000569252 PYROXD2Q8N2H3 581 aa16.5■□□□□ 0.23
USB1-215ENST00000569252 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.5■□□□□ 0.23
USB1-215ENST00000569252 RBM41Q96IZ5 413 aaKnown RBP16.5■□□□□ 0.23
USB1-215ENST00000569252 CNTNAP3BQ96NU0 1288 aa16.5■□□□□ 0.23
USB1-215ENST00000569252 CNTNAP3Q9BZ76 1288 aa16.5■□□□□ 0.23
USB1-215ENST00000569252 RCOR3Q9P2K3 495 aaPredicted RBP16.5■□□□□ 0.23
USB1-215ENST00000569252 CAPN6Q9Y6Q1 641 aa16.5■□□□□ 0.23
USB1-215ENST00000569252 PIAS3Q9Y6X2 628 aa16.5■□□□□ 0.23
USB1-215ENST00000569252 ACACBO00763 2458 aa16.5■□□□□ 0.23
USB1-215ENST00000569252 A0A1B0GVM2 712 aa16.49■□□□□ 0.23
USB1-215ENST00000569252 LRRD1A4D1F6 860 aa16.49■□□□□ 0.23
USB1-215ENST00000569252 TCAF2A6NFQ2 919 aa16.49■□□□□ 0.23
USB1-215ENST00000569252 RHOQP17081 205 aa16.49■□□□□ 0.23
USB1-215ENST00000569252 KDELR1P24390 212 aa16.49■□□□□ 0.23
USB1-215ENST00000569252 CTNNA2P26232 953 aa16.49■□□□□ 0.23
USB1-215ENST00000569252 OR1E1P30953 314 aa16.49■□□□□ 0.23
USB1-215ENST00000569252 CTNNA1P35221 906 aaKnown RBP16.49■□□□□ 0.23
USB1-215ENST00000569252 RPS24P62847 133 aaKnown RBP16.49■□□□□ 0.23
USB1-215ENST00000569252 CSTF1Q05048 431 aaKnown RBP16.49■□□□□ 0.23
USB1-215ENST00000569252 ATP13A4Q4VNC1 1196 aa16.49■□□□□ 0.23
USB1-215ENST00000569252 C6orf118Q5T5N4 469 aa16.49■□□□□ 0.23
USB1-215ENST00000569252 FYB2Q5VWT5 728 aa16.49■□□□□ 0.23
USB1-215ENST00000569252 CHST9Q7L1S5 443 aa16.49■□□□□ 0.23
USB1-215ENST00000569252 CPNE8Q86YQ8 564 aa16.49■□□□□ 0.23
USB1-215ENST00000569252 RUBCNQ92622 972 aa16.49■□□□□ 0.23
USB1-215ENST00000569252 IGSF8Q969P0 613 aa16.49■□□□□ 0.23
USB1-215ENST00000569252 KCTD15Q96SI1 283 aaPredicted RBP16.49■□□□□ 0.23
USB1-215ENST00000569252 PNKPQ96T60 521 aa16.49■□□□□ 0.23
USB1-215ENST00000569252 HEBP1Q9NRV9 189 aa16.49■□□□□ 0.23
USB1-215ENST00000569252 KCND1Q9NSA2 647 aa16.49■□□□□ 0.23
USB1-215ENST00000569252 DNAJC17Q9NVM6 304 aaKnown RBP16.49■□□□□ 0.23
USB1-215ENST00000569252 KIAA1522Q9P206 1035 aaPredicted RBP16.49■□□□□ 0.23
USB1-215ENST00000569252 ZKSCAN5Q9Y2L8 839 aa16.49■□□□□ 0.23
USB1-215ENST00000569252 MRPS17Q9Y2R5 130 aaKnown RBP16.49■□□□□ 0.23
USB1-215ENST00000569252 JRKLQ9Y4A0 524 aa16.49■□□□□ 0.23
USB1-215ENST00000569252 ZFHX4Q86UP3 3567 aa16.48■□□□□ 0.23
USB1-215ENST00000569252 IGLV3-10A0A075B6K4 115 aa16.48■□□□□ 0.23
USB1-215ENST00000569252 SPECC1L-ADORA2AF8WAN1 911 aa16.48■□□□□ 0.23
USB1-215ENST00000569252 FAM72CH0Y354 149 aa16.48■□□□□ 0.23
USB1-215ENST00000569252 I6L893 689 aaPredicted RBP16.48■□□□□ 0.23
USB1-215ENST00000569252 ARNTLO00327 626 aa16.48■□□□□ 0.23
USB1-215ENST00000569252 LUC7L3O95232 432 aaKnown RBP16.48■□□□□ 0.23
USB1-215ENST00000569252 PENKP01210 267 aaPredicted RBP16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms