RNA–Protein interactions for RNA: ENST00000569251.5

SCAMP2-211, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 2

Gene SCAMP2, Length 867 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-211ENST00000569251 CDK17Q00537 523 aa13.31□□□□□ -0.28
SCAMP2-211ENST00000569251 HNRNPDQ14103 355 aaKnown RBP13.31□□□□□ -0.28
SCAMP2-211ENST00000569251 TTC31Q49AM3 519 aaPredicted RBP13.31□□□□□ -0.28
SCAMP2-211ENST00000569251 C9orf64Q5T6V5 341 aa13.31□□□□□ -0.28
SCAMP2-211ENST00000569251 OLFML1Q6UWY5 402 aa13.31□□□□□ -0.28
SCAMP2-211ENST00000569251 C11orf57Q6ZUT1 292 aaPredicted RBP13.31□□□□□ -0.28
SCAMP2-211ENST00000569251 FAM183BPQ6ZVS7 135 aa13.31□□□□□ -0.28
SCAMP2-211ENST00000569251 USP30Q70CQ3 517 aa13.31□□□□□ -0.28
SCAMP2-211ENST00000569251 SLC47A2Q86VL8 602 aa13.31□□□□□ -0.28
SCAMP2-211ENST00000569251 FAM114A1Q8IWE2 563 aa13.31□□□□□ -0.28
SCAMP2-211ENST00000569251 DHX40Q8IX18 779 aaKnown RBP13.31□□□□□ -0.28
SCAMP2-211ENST00000569251 FAM71AQ8IYT1 594 aa13.31□□□□□ -0.28
SCAMP2-211ENST00000569251 APCDD1Q8J025 514 aa13.31□□□□□ -0.28
SCAMP2-211ENST00000569251 C1orf131Q8NDD1 294 aaKnown RBP13.31□□□□□ -0.28
SCAMP2-211ENST00000569251 BIRC7Q96CA5 298 aa13.31□□□□□ -0.28
SCAMP2-211ENST00000569251 NOX5Q96PH1 765 aa13.31□□□□□ -0.28
SCAMP2-211ENST00000569251 TMEM121BQ9BXQ6 578 aaPredicted RBP13.31□□□□□ -0.28
SCAMP2-211ENST00000569251 ADAM33Q9BZ11 813 aa13.31□□□□□ -0.28
SCAMP2-211ENST00000569251 PABPC3Q9H361 631 aaKnown RBP13.31□□□□□ -0.28
SCAMP2-211ENST00000569251 NDST4Q9H3R1 872 aa13.31□□□□□ -0.28
SCAMP2-211ENST00000569251 FAM204AQ9H8W3 233 aa13.31□□□□□ -0.28
SCAMP2-211ENST00000569251 SGK2Q9HBY8 427 aa13.31□□□□□ -0.28
SCAMP2-211ENST00000569251 OSGEPQ9NPF4 335 aa13.31□□□□□ -0.28
SCAMP2-211ENST00000569251 DDIT4Q9NX09 232 aa13.31□□□□□ -0.28
SCAMP2-211ENST00000569251 SLC12A6Q9UHW9 1150 aa13.31□□□□□ -0.28
SCAMP2-211ENST00000569251 SLCO3A1Q9UIG8 710 aa13.31□□□□□ -0.28
SCAMP2-211ENST00000569251 SCML1Q9UN30 329 aa13.31□□□□□ -0.28
SCAMP2-211ENST00000569251 ITIH6Q6UXX5 1313 aa13.31□□□□□ -0.28
SCAMP2-211ENST00000569251 TARSL2A2RTX5 802 aaKnown RBP13.3□□□□□ -0.28
SCAMP2-211ENST00000569251 TTC34A8MYJ7 566 aa13.3□□□□□ -0.28
SCAMP2-211ENST00000569251 C1QTNF9BB2RNN3 333 aa13.3□□□□□ -0.28
SCAMP2-211ENST00000569251 GRAP2O75791 330 aa13.3□□□□□ -0.28
SCAMP2-211ENST00000569251 MOCS3O95396 460 aa13.3□□□□□ -0.28
SCAMP2-211ENST00000569251 ERBB2P04626 1255 aa13.3□□□□□ -0.28
SCAMP2-211ENST00000569251 C1QTNF9P0C862 333 aa13.3□□□□□ -0.28
SCAMP2-211ENST00000569251 PNMA6AP0CW24 399 aaPredicted RBP13.3□□□□□ -0.28
SCAMP2-211ENST00000569251 SLC2A3P11169 496 aa13.3□□□□□ -0.28
SCAMP2-211ENST00000569251 ERCC5P28715 1186 aaPredicted RBP13.3□□□□□ -0.28
SCAMP2-211ENST00000569251 CCR1P32246 355 aa13.3□□□□□ -0.28
SCAMP2-211ENST00000569251 KRT9P35527 623 aa13.3□□□□□ -0.28
SCAMP2-211ENST00000569251 CSNK1EP49674 416 aaKnown RBP13.3□□□□□ -0.28
SCAMP2-211ENST00000569251 AFF3P51826 1226 aaKnown RBP13.3□□□□□ -0.28
SCAMP2-211ENST00000569251 PLK1P53350 603 aa13.3□□□□□ -0.28
SCAMP2-211ENST00000569251 ECT2LQ008S8 904 aa13.3□□□□□ -0.28
SCAMP2-211ENST00000569251 KCNMA1Q12791 1236 aa13.3□□□□□ -0.28
SCAMP2-211ENST00000569251 SLC12A1Q13621 1099 aa13.3□□□□□ -0.28
SCAMP2-211ENST00000569251 PTPN20Q4JDL3 420 aa13.3□□□□□ -0.28
SCAMP2-211ENST00000569251 VWA3BQ502W6 1294 aa13.3□□□□□ -0.28
SCAMP2-211ENST00000569251 TTC39BQ5VTQ0 682 aaPredicted RBP13.3□□□□□ -0.28
SCAMP2-211ENST00000569251 OR6B2Q6IFH4 312 aa13.3□□□□□ -0.28
SCAMP2-211ENST00000569251 IL27RAQ6UWB1 636 aa13.3□□□□□ -0.28
SCAMP2-211ENST00000569251 UNQ6494/PRO21346Q6UXR6 183 aa13.3□□□□□ -0.28
SCAMP2-211ENST00000569251 SLC26A9Q7LBE3 791 aa13.3□□□□□ -0.28
SCAMP2-211ENST00000569251 CIR1Q86X95 450 aaPredicted RBP13.3□□□□□ -0.28
SCAMP2-211ENST00000569251 CCAR2Q8N163 923 aaKnown RBP13.3□□□□□ -0.28
SCAMP2-211ENST00000569251 SNX19Q92543 992 aa13.3□□□□□ -0.28
SCAMP2-211ENST00000569251 CAMK1GQ96NX5 476 aa13.3□□□□□ -0.28
SCAMP2-211ENST00000569251 ORAI3Q9BRQ5 295 aa13.3□□□□□ -0.28
SCAMP2-211ENST00000569251 TUBGCP2Q9BSJ2 902 aa13.3□□□□□ -0.28
SCAMP2-211ENST00000569251 GAREM1Q9H706 876 aa13.3□□□□□ -0.28
SCAMP2-211ENST00000569251 IL21RQ9HBE5 538 aa13.3□□□□□ -0.28
SCAMP2-211ENST00000569251 MYLKQ15746 1914 aa13.29□□□□□ -0.28
SCAMP2-211ENST00000569251 SYNJ2BP-COX16A0A087WUM0 186 aa13.29□□□□□ -0.28
SCAMP2-211ENST00000569251 EDDM13A0A1B0GTR0 161 aa13.29□□□□□ -0.28
SCAMP2-211ENST00000569251 A0A1B0GVM2 712 aa13.29□□□□□ -0.28
SCAMP2-211ENST00000569251 A0A1B0GVT2 93 aa13.29□□□□□ -0.28
SCAMP2-211ENST00000569251 TCAF2A6NFQ2 919 aa13.29□□□□□ -0.28
SCAMP2-211ENST00000569251 C10orf142B7Z368 130 aa13.29□□□□□ -0.28
SCAMP2-211ENST00000569251 MID1O15344 667 aa13.29□□□□□ -0.28
SCAMP2-211ENST00000569251 HYAL3O43820 417 aaPredicted RBP13.29□□□□□ -0.28
SCAMP2-211ENST00000569251 RNASEH1O60930 286 aaKnown RBP13.29□□□□□ -0.28
SCAMP2-211ENST00000569251 CBFA2T3O75081 653 aa13.29□□□□□ -0.28
SCAMP2-211ENST00000569251 DAB1O75553 588 aa13.29□□□□□ -0.28
SCAMP2-211ENST00000569251 CER1O95813 267 aa13.29□□□□□ -0.28
SCAMP2-211ENST00000569251 PRKCSHP14314 528 aaPredicted RBP13.29□□□□□ -0.28
SCAMP2-211ENST00000569251 ABCB4P21439 1286 aa13.29□□□□□ -0.28
SCAMP2-211ENST00000569251 CD27P26842 260 aa13.29□□□□□ -0.28
SCAMP2-211ENST00000569251 NOS2P35228 1153 aa13.29□□□□□ -0.28
SCAMP2-211ENST00000569251 MATKP42679 507 aa13.29□□□□□ -0.28
SCAMP2-211ENST00000569251 SNX16P57768 344 aa13.29□□□□□ -0.28
SCAMP2-211ENST00000569251 SLC6A3Q01959 620 aa13.29□□□□□ -0.28
SCAMP2-211ENST00000569251 TRIP6Q15654 476 aaKnown RBP13.29□□□□□ -0.28
SCAMP2-211ENST00000569251 CST6Q15828 149 aa13.29□□□□□ -0.28
SCAMP2-211ENST00000569251 HLA-BQ31612 363 aa13.29□□□□□ -0.28
SCAMP2-211ENST00000569251 HSP90AA4PQ58FG1 418 aa13.29□□□□□ -0.28
SCAMP2-211ENST00000569251 CXorf57Q6NSI4 855 aaKnown RBP13.29□□□□□ -0.28
SCAMP2-211ENST00000569251 FBXL22Q6P050 247 aa13.29□□□□□ -0.28
SCAMP2-211ENST00000569251 DBX2Q6ZNG2 339 aa13.29□□□□□ -0.28
SCAMP2-211ENST00000569251 NAXDQ8IW45 347 aa13.29□□□□□ -0.28
SCAMP2-211ENST00000569251 ZNF397Q8NF99 534 aaPredicted RBP13.29□□□□□ -0.28
SCAMP2-211ENST00000569251 GATA6Q92908 595 aa13.29□□□□□ -0.28
SCAMP2-211ENST00000569251 PTPRN2Q92932 1015 aa13.29□□□□□ -0.28
SCAMP2-211ENST00000569251 IGSF8Q969P0 613 aa13.29□□□□□ -0.28
SCAMP2-211ENST00000569251 RPL10LQ96L21 214 aaKnown RBP13.29□□□□□ -0.28
SCAMP2-211ENST00000569251 FAM129BQ96TA1 746 aa13.29□□□□□ -0.28
SCAMP2-211ENST00000569251 TM9SF3Q9HD45 589 aa13.29□□□□□ -0.28
SCAMP2-211ENST00000569251 PLCB1Q9NQ66 1216 aa13.29□□□□□ -0.28
SCAMP2-211ENST00000569251 FBXL12Q9NXK8 326 aa13.29□□□□□ -0.28
SCAMP2-211ENST00000569251 COX16Q9P0S2 106 aa13.29□□□□□ -0.28
SCAMP2-211ENST00000569251 SERGEFQ9UGK8 458 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms