RNA–Protein interactions for RNA: ENST00000569080.1

CDH3-209, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 291 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-209ENST00000569080 CARNMT1Q8N4J0 409 aa8.08□□□□□ -1.12
CDH3-209ENST00000569080 ATP6V0D2Q8N8Y2 350 aa8.08□□□□□ -1.12
CDH3-209ENST00000569080 CADM4Q8NFZ8 388 aa8.08□□□□□ -1.12
CDH3-209ENST00000569080 C1orf216Q8TAB5 229 aa8.08□□□□□ -1.12
CDH3-209ENST00000569080 ORAI3Q9BRQ5 295 aa8.08□□□□□ -1.12
CDH3-209ENST00000569080 GPR174Q9BXC1 333 aa8.08□□□□□ -1.12
CDH3-209ENST00000569080 RSPH9Q9H1X1 276 aaPredicted RBP8.08□□□□□ -1.12
CDH3-209ENST00000569080 FBRSQ9HAH7 460 aa8.08□□□□□ -1.12
CDH3-209ENST00000569080 FAM207AQ9NSI2 230 aaPredicted RBP8.08□□□□□ -1.12
CDH3-209ENST00000569080 ANO10Q9NW15 660 aa8.08□□□□□ -1.12
CDH3-209ENST00000569080 ARHGEF38Q9NXL2 777 aa8.08□□□□□ -1.12
CDH3-209ENST00000569080 ZNF212Q9UDV6 495 aa8.08□□□□□ -1.12
CDH3-209ENST00000569080 LIMA1Q9UHB6 759 aaKnown RBP8.08□□□□□ -1.12
CDH3-209ENST00000569080 TMEM59LQ9UK28 342 aa8.08□□□□□ -1.12
CDH3-209ENST00000569080 PLA2G4CQ9UP65 541 aa8.08□□□□□ -1.12
CDH3-209ENST00000569080 CEP83Q9Y592 693 aa8.08□□□□□ -1.12
CDH3-209ENST00000569080 OR51B4Q9Y5P0 310 aa8.08□□□□□ -1.12
CDH3-209ENST00000569080 HS3ST4Q9Y661 456 aa8.08□□□□□ -1.12
CDH3-209ENST00000569080 PLXNA2O75051 1894 aa8.08□□□□□ -1.12
CDH3-209ENST00000569080 CHD5Q8TDI0 1954 aa8.08□□□□□ -1.12
CDH3-209ENST00000569080 MAP1BP46821 2468 aaKnown RBP8.07□□□□□ -1.12
CDH3-209ENST00000569080 SYNJ2BP-COX16A0A087WUM0 186 aa8.07□□□□□ -1.12
CDH3-209ENST00000569080 LRRC10BA6NIK2 292 aa8.07□□□□□ -1.12
CDH3-209ENST00000569080 M0QYT0 321 aa8.07□□□□□ -1.12
CDH3-209ENST00000569080 PES1O00541 588 aaKnown RBP8.07□□□□□ -1.12
CDH3-209ENST00000569080 GIPC1O14908 333 aa8.07□□□□□ -1.12
CDH3-209ENST00000569080 ZBTB24O43167 697 aaPredicted RBP8.07□□□□□ -1.12
CDH3-209ENST00000569080 PAGE1O75459 146 aa8.07□□□□□ -1.12
CDH3-209ENST00000569080 GFPT2O94808 682 aa8.07□□□□□ -1.12
CDH3-209ENST00000569080 KCNK5O95279 499 aa8.07□□□□□ -1.12
CDH3-209ENST00000569080 ADCY5O95622 1261 aa8.07□□□□□ -1.12
CDH3-209ENST00000569080 CFIP05156 583 aa8.07□□□□□ -1.12
CDH3-209ENST00000569080 ATP1A3P13637 1013 aa8.07□□□□□ -1.12
CDH3-209ENST00000569080 PDGFRAP16234 1089 aa8.07□□□□□ -1.12
CDH3-209ENST00000569080 ABCB4P21439 1286 aa8.07□□□□□ -1.12
CDH3-209ENST00000569080 MMP8P22894 467 aa8.07□□□□□ -1.12
CDH3-209ENST00000569080 MAOBP27338 520 aa8.07□□□□□ -1.12
CDH3-209ENST00000569080 MZF1P28698 734 aaPredicted RBP8.07□□□□□ -1.12
CDH3-209ENST00000569080 ACSL1P33121 698 aa8.07□□□□□ -1.12
CDH3-209ENST00000569080 SOX5P35711 763 aa8.07□□□□□ -1.12
CDH3-209ENST00000569080 MAPK8P45983 427 aa8.07□□□□□ -1.12
CDH3-209ENST00000569080 STK19P49842 368 aaPredicted RBP8.07□□□□□ -1.12
CDH3-209ENST00000569080 PLK1P53350 603 aa8.07□□□□□ -1.12
CDH3-209ENST00000569080 CDR2Q01850 454 aa8.07□□□□□ -1.12
CDH3-209ENST00000569080 BNC1Q01954 994 aa8.07□□□□□ -1.12
CDH3-209ENST00000569080 ARID5AQ03989 594 aa8.07□□□□□ -1.12
CDH3-209ENST00000569080 ZBTB16Q05516 673 aa8.07□□□□□ -1.12
CDH3-209ENST00000569080 TYRO3Q06418 890 aa8.07□□□□□ -1.12
CDH3-209ENST00000569080 PTP4A2Q12974 167 aa8.07□□□□□ -1.12
CDH3-209ENST00000569080 SEMA3BQ13214 749 aa8.07□□□□□ -1.12
CDH3-209ENST00000569080 NME3Q13232 169 aa8.07□□□□□ -1.12
CDH3-209ENST00000569080 AUHQ13825 339 aaKnown RBP8.07□□□□□ -1.12
CDH3-209ENST00000569080 SYCP1Q15431 976 aa8.07□□□□□ -1.12
CDH3-209ENST00000569080 BRMS1LQ5PSV4 323 aa8.07□□□□□ -1.12
CDH3-209ENST00000569080 C9orf64Q5T6V5 341 aa8.07□□□□□ -1.12
CDH3-209ENST00000569080 FAM102AQ5T9C2 384 aaPredicted RBP8.07□□□□□ -1.12
CDH3-209ENST00000569080 NAA35Q5VZE5 725 aa8.07□□□□□ -1.12
CDH3-209ENST00000569080 ZNF776Q68DI1 518 aaPredicted RBP8.07□□□□□ -1.12
CDH3-209ENST00000569080 PSAPL1Q6NUJ1 521 aa8.07□□□□□ -1.12
CDH3-209ENST00000569080 ARCQ7LC44 396 aa8.07□□□□□ -1.12
CDH3-209ENST00000569080 PIP4P1Q86T03 277 aa8.07□□□□□ -1.12
CDH3-209ENST00000569080 ZNF677Q86XU0 584 aa8.07□□□□□ -1.12
CDH3-209ENST00000569080 OR2I1PQ8NGU4 316 aa8.07□□□□□ -1.12
CDH3-209ENST00000569080 CEP76Q8TAP6 659 aa8.07□□□□□ -1.12
CDH3-209ENST00000569080 FOXJ1Q92949 421 aa8.07□□□□□ -1.12
CDH3-209ENST00000569080 FAM131CQ96AQ9 280 aa8.07□□□□□ -1.12
CDH3-209ENST00000569080 C18orf8Q96DM3 657 aa8.07□□□□□ -1.12
CDH3-209ENST00000569080 ERGIC2Q96RQ1 377 aa8.07□□□□□ -1.12
CDH3-209ENST00000569080 TBCBQ99426 244 aa8.07□□□□□ -1.12
CDH3-209ENST00000569080 NUSAP1Q9BXS6 441 aaKnown RBP8.07□□□□□ -1.12
CDH3-209ENST00000569080 PCED1AQ9H1Q7 454 aa8.07□□□□□ -1.12
CDH3-209ENST00000569080 C6orf106Q9H6K1 298 aaPredicted RBP8.07□□□□□ -1.12
CDH3-209ENST00000569080 SYNCQ9H7C4 482 aa8.07□□□□□ -1.12
CDH3-209ENST00000569080 TMPRSS4Q9NRS4 437 aa8.07□□□□□ -1.12
CDH3-209ENST00000569080 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.07□□□□□ -1.12
CDH3-209ENST00000569080 COX16Q9P0S2 106 aa8.07□□□□□ -1.12
CDH3-209ENST00000569080 KIAA1522Q9P206 1035 aaPredicted RBP8.07□□□□□ -1.12
CDH3-209ENST00000569080 SERGEFQ9UGK8 458 aa8.07□□□□□ -1.12
CDH3-209ENST00000569080 VANGL2Q9ULK5 521 aa8.07□□□□□ -1.12
CDH3-209ENST00000569080 SLC6A14Q9UN76 642 aa8.07□□□□□ -1.12
CDH3-209ENST00000569080 WASF3Q9UPY6 502 aa8.07□□□□□ -1.12
CDH3-209ENST00000569080 ERVW-1Q9UQF0 538 aa8.07□□□□□ -1.12
CDH3-209ENST00000569080 DAAM1Q9Y4D1 1078 aa8.07□□□□□ -1.12
CDH3-209ENST00000569080 CFAP47Q6ZTR5 3102 aa8.06□□□□□ -1.12
CDH3-209ENST00000569080 IGLV3-10A0A075B6K4 115 aa8.06□□□□□ -1.12
CDH3-209ENST00000569080 METTL12A8MUP2 240 aa8.06□□□□□ -1.12
CDH3-209ENST00000569080 TTC34A8MYJ7 566 aa8.06□□□□□ -1.12
CDH3-209ENST00000569080 UPK3BL1B0FP48 263 aa8.06□□□□□ -1.12
CDH3-209ENST00000569080 UPK3BL2E5RIL1 263 aa8.06□□□□□ -1.12
CDH3-209ENST00000569080 H0Y626 953 aa8.06□□□□□ -1.12
CDH3-209ENST00000569080 NDUFS2O75306 463 aa8.06□□□□□ -1.12
CDH3-209ENST00000569080 CNTN5O94779 1100 aa8.06□□□□□ -1.12
CDH3-209ENST00000569080 IGHV4-34P06331 123 aa8.06□□□□□ -1.12
CDH3-209ENST00000569080 SRPRAP08240 638 aaKnown RBP8.06□□□□□ -1.12
CDH3-209ENST00000569080 ACADMP11310 421 aa8.06□□□□□ -1.12
CDH3-209ENST00000569080 UNGP13051 313 aaPredicted RBP8.06□□□□□ -1.12
CDH3-209ENST00000569080 VAV1P15498 845 aa8.06□□□□□ -1.12
CDH3-209ENST00000569080 CSRP1P21291 193 aaKnown RBP8.06□□□□□ -1.12
CDH3-209ENST00000569080 OXTRP30559 389 aa8.06□□□□□ -1.12
CDH3-209ENST00000569080 NUMBP49757 651 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms