RNA–Protein interactions for RNA: ENST00000569046.1

HMGB1P6-201, Transcript of high mobility group box 1 pseudogene 6, humanhuman

BASIC

Gene HMGB1P6, Length 646 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P6-201ENST00000569046 C9orf78Q9NZ63 289 aaPredicted RBP3.86□□□□□ -1.79
HMGB1P6-201ENST00000569046 MAN2B2Q9Y2E5 1009 aa3.86□□□□□ -1.79
HMGB1P6-201ENST00000569046 SMG6Q86US8 1419 aaKnown RBP3.86□□□□□ -1.79
HMGB1P6-201ENST00000569046 ZNF831Q5JPB2 1677 aa3.85□□□□□ -1.79
HMGB1P6-201ENST00000569046 NRXN2Q9P2S2 1712 aa3.85□□□□□ -1.79
HMGB1P6-201ENST00000569046 WDR91A4D1P6 747 aa3.85□□□□□ -1.79
HMGB1P6-201ENST00000569046 PPP6CO00743 305 aa3.85□□□□□ -1.79
HMGB1P6-201ENST00000569046 TMPRSS11DO60235 418 aa3.85□□□□□ -1.79
HMGB1P6-201ENST00000569046 SNX2O60749 519 aa3.85□□□□□ -1.79
HMGB1P6-201ENST00000569046 PRAMEF2O60811 474 aa3.85□□□□□ -1.79
HMGB1P6-201ENST00000569046 MBPP02686 304 aaPredicted RBP3.85□□□□□ -1.79
HMGB1P6-201ENST00000569046 TUBB4AP04350 444 aa3.85□□□□□ -1.79
HMGB1P6-201ENST00000569046 CHRM5P08912 532 aaPredicted RBP3.85□□□□□ -1.79
HMGB1P6-201ENST00000569046 SETSIPP0DME0 302 aa3.85□□□□□ -1.79
HMGB1P6-201ENST00000569046 CD19P15391 556 aa3.85□□□□□ -1.79
HMGB1P6-201ENST00000569046 MST1P26927 711 aa3.85□□□□□ -1.79
HMGB1P6-201ENST00000569046 GABRB3P28472 473 aa3.85□□□□□ -1.79
HMGB1P6-201ENST00000569046 TM4SF1P30408 202 aa3.85□□□□□ -1.79
HMGB1P6-201ENST00000569046 PBX1P40424 430 aa3.85□□□□□ -1.79
HMGB1P6-201ENST00000569046 CRKLP46109 303 aaKnown RBP3.85□□□□□ -1.79
HMGB1P6-201ENST00000569046 EIF4A1P60842 406 aaKnown RBP3.85□□□□□ -1.79
HMGB1P6-201ENST00000569046 GPC5P78333 572 aa3.85□□□□□ -1.79
HMGB1P6-201ENST00000569046 CLCA4Q14CN2 919 aa3.85□□□□□ -1.79
HMGB1P6-201ENST00000569046 ACOX1Q15067 660 aa3.85□□□□□ -1.79
HMGB1P6-201ENST00000569046 SEC23BQ15437 767 aa3.85□□□□□ -1.79
HMGB1P6-201ENST00000569046 SRSF7Q16629 238 aaKnown RBP eCLIP3.85□□□□□ -1.79
HMGB1P6-201ENST00000569046 ALFQ53S48 1182 aa3.85□□□□□ -1.79
HMGB1P6-201ENST00000569046 CCDC70Q6NSX1 233 aa3.85□□□□□ -1.79
HMGB1P6-201ENST00000569046 SLC18B1Q6NT16 456 aa3.85□□□□□ -1.79
HMGB1P6-201ENST00000569046 C2CD5Q86YS7 1000 aa3.85□□□□□ -1.79
HMGB1P6-201ENST00000569046 CCDC28AQ8IWP9 274 aa3.85□□□□□ -1.79
HMGB1P6-201ENST00000569046 FSTL5Q8N475 847 aaPredicted RBP3.85□□□□□ -1.79
HMGB1P6-201ENST00000569046 TEX19Q8NA77 164 aa3.85□□□□□ -1.79
HMGB1P6-201ENST00000569046 GLIS1Q8NBF1 620 aa3.85□□□□□ -1.79
HMGB1P6-201ENST00000569046 MBD3L2Q8NHZ7 208 aaPredicted RBP3.85□□□□□ -1.79
HMGB1P6-201ENST00000569046 ADAMTS18Q8TE60 1221 aa3.85□□□□□ -1.79
HMGB1P6-201ENST00000569046 ZNF622Q969S3 477 aaKnown RBP eCLIP3.85□□□□□ -1.79
HMGB1P6-201ENST00000569046 ZC3H10Q96K80 434 aaKnown RBP3.85□□□□□ -1.79
HMGB1P6-201ENST00000569046 CCDC17Q96LX7 622 aa3.85□□□□□ -1.79
HMGB1P6-201ENST00000569046 RIPOR3Q96MK2 946 aa3.85□□□□□ -1.79
HMGB1P6-201ENST00000569046 WDR24Q96S15 920 aa3.85□□□□□ -1.79
HMGB1P6-201ENST00000569046 MYD88Q99836 296 aa3.85□□□□□ -1.79
HMGB1P6-201ENST00000569046 SAP30LQ9HAJ7 183 aa3.85□□□□□ -1.79
HMGB1P6-201ENST00000569046 STARD7Q9NQZ5 370 aa3.85□□□□□ -1.79
HMGB1P6-201ENST00000569046 SNX15Q9NRS6 342 aa3.85□□□□□ -1.79
HMGB1P6-201ENST00000569046 SAGE1Q9NXZ1 904 aa3.85□□□□□ -1.79
HMGB1P6-201ENST00000569046 ZMYND8Q9ULU4 1186 aaPredicted RBP3.85□□□□□ -1.79
HMGB1P6-201ENST00000569046 GTF2A1LQ9UNN4 478 aa3.85□□□□□ -1.79
HMGB1P6-201ENST00000569046 PCDHGB3Q9Y5G1 929 aa3.85□□□□□ -1.79
HMGB1P6-201ENST00000569046 SCN4AP35499 1836 aa3.85□□□□□ -1.79
HMGB1P6-201ENST00000569046 CGNL1Q0VF96 1302 aa3.85□□□□□ -1.79
HMGB1P6-201ENST00000569046 TRPM7Q96QT4 1865 aa3.85□□□□□ -1.79
HMGB1P6-201ENST00000569046 INSRP06213 1382 aa3.85□□□□□ -1.79
HMGB1P6-201ENST00000569046 CARMIL3Q8ND23 1372 aa3.85□□□□□ -1.79
HMGB1P6-201ENST00000569046 ANKRD26Q9UPS8 1709 aa3.84□□□□□ -1.79
HMGB1P6-201ENST00000569046 SMIM35A0A1B0GVV1 85 aa3.84□□□□□ -1.79
HMGB1P6-201ENST00000569046 RASA4BC9J798 803 aa3.84□□□□□ -1.79
HMGB1P6-201ENST00000569046 H3BNC9 293 aa3.84□□□□□ -1.79
HMGB1P6-201ENST00000569046 RASA4O43374 803 aa3.84□□□□□ -1.79
HMGB1P6-201ENST00000569046 GCATO75600 419 aa3.84□□□□□ -1.79
HMGB1P6-201ENST00000569046 FGF18O76093 207 aa3.84□□□□□ -1.79
HMGB1P6-201ENST00000569046 WDR47O94967 919 aa3.84□□□□□ -1.79
HMGB1P6-201ENST00000569046 SERPINB2P05120 415 aa3.84□□□□□ -1.79
HMGB1P6-201ENST00000569046 TMEM225BP0DP42 221 aa3.84□□□□□ -1.79
HMGB1P6-201ENST00000569046 HSPA8P11142 646 aaKnown RBP3.84□□□□□ -1.79
HMGB1P6-201ENST00000569046 MYL4P12829 197 aa3.84□□□□□ -1.79
HMGB1P6-201ENST00000569046 ADRA1DP25100 572 aa3.84□□□□□ -1.79
HMGB1P6-201ENST00000569046 CERS1P27544 350 aa3.84□□□□□ -1.79
HMGB1P6-201ENST00000569046 CTCFP49711 727 aaPredicted RBP3.84□□□□□ -1.79
HMGB1P6-201ENST00000569046 CFHR3Q02985 330 aa3.84□□□□□ -1.79
HMGB1P6-201ENST00000569046 GPS1Q13098 491 aa3.84□□□□□ -1.79
HMGB1P6-201ENST00000569046 LARS2Q15031 903 aaKnown RBP3.84□□□□□ -1.79
HMGB1P6-201ENST00000569046 ST3GAL2Q16842 350 aa3.84□□□□□ -1.79
HMGB1P6-201ENST00000569046 SLC35G1Q2M3R5 365 aa3.84□□□□□ -1.79
HMGB1P6-201ENST00000569046 ARL13BQ3SXY8 428 aa3.84□□□□□ -1.79
HMGB1P6-201ENST00000569046 AASDHQ4L235 1098 aaPredicted RBP3.84□□□□□ -1.79
HMGB1P6-201ENST00000569046 MTX3Q5HYI7 312 aa3.84□□□□□ -1.79
HMGB1P6-201ENST00000569046 KIAA1614Q5VZ46 1190 aa3.84□□□□□ -1.79
HMGB1P6-201ENST00000569046 ZNF626Q68DY1 528 aa3.84□□□□□ -1.79
HMGB1P6-201ENST00000569046 TMEM65Q6PI78 240 aa3.84□□□□□ -1.79
HMGB1P6-201ENST00000569046 OLFM4Q6UX06 510 aa3.84□□□□□ -1.79
HMGB1P6-201ENST00000569046 DCDC5Q6ZRR9 648 aa3.84□□□□□ -1.79
HMGB1P6-201ENST00000569046 BEND5Q7L4P6 421 aa3.84□□□□□ -1.79
HMGB1P6-201ENST00000569046 NEK8Q86SG6 692 aa3.84□□□□□ -1.79
HMGB1P6-201ENST00000569046 GALNT16Q8N428 558 aa3.84□□□□□ -1.79
HMGB1P6-201ENST00000569046 NKAPQ8N5F7 415 aaKnown RBP3.84□□□□□ -1.79
HMGB1P6-201ENST00000569046 OR2C3Q8N628 320 aa3.84□□□□□ -1.79
HMGB1P6-201ENST00000569046 C12orf76Q8N812 135 aaPredicted RBP3.84□□□□□ -1.79
HMGB1P6-201ENST00000569046 PNPLA1Q8N8W4 532 aa3.84□□□□□ -1.79
HMGB1P6-201ENST00000569046 SGCZQ96LD1 299 aa3.84□□□□□ -1.79
HMGB1P6-201ENST00000569046 ZNF778Q96MU6 729 aa3.84□□□□□ -1.79
HMGB1P6-201ENST00000569046 SCLT1Q96NL6 688 aa3.84□□□□□ -1.79
HMGB1P6-201ENST00000569046 FYTTD1Q96QD9 318 aaKnown RBP3.84□□□□□ -1.79
HMGB1P6-201ENST00000569046 EFHD1Q9BUP0 239 aa3.84□□□□□ -1.79
HMGB1P6-201ENST00000569046 MAGEB5Q9BZ81 275 aa3.84□□□□□ -1.79
HMGB1P6-201ENST00000569046 SEMA4CQ9C0C4 833 aa3.84□□□□□ -1.79
HMGB1P6-201ENST00000569046 PCDHAC1Q9H158 963 aa3.84□□□□□ -1.79
HMGB1P6-201ENST00000569046 ZHX3Q9H4I2 956 aa3.84□□□□□ -1.79
HMGB1P6-201ENST00000569046 USP29Q9HBJ7 922 aa3.84□□□□□ -1.79
HMGB1P6-201ENST00000569046 ZBTB26Q9HCK0 441 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms