RNA–Protein interactions for RNA: ENST00000569001.1

BBS4-215, Transcript of Bardet-Biedl syndrome 4, human

TSL 3

Gene BBS4, Length 349 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BBS4-215	ENST00000569001	TCRBV7S3A2	A0A539	114 aa		3.37	□□□□□ -1.87
BBS4-215	ENST00000569001	ANO9	A1A5B4	782 aa		3.37	□□□□□ -1.87
BBS4-215	ENST00000569001	BECN2	A8MW95	431 aa		3.37	□□□□□ -1.87
BBS4-215	ENST00000569001	MSI1	O43347	362 aa	Known RBP	3.37	□□□□□ -1.87
BBS4-215	ENST00000569001	AK2	P54819	239 aa		3.37	□□□□□ -1.87
BBS4-215	ENST00000569001	ZBTB16	Q05516	673 aa		3.37	□□□□□ -1.87
BBS4-215	ENST00000569001	TRAF1	Q13077	416 aa		3.37	□□□□□ -1.87
BBS4-215	ENST00000569001		Q6ZTK2	550 aa		3.37	□□□□□ -1.87
BBS4-215	ENST00000569001	TRIL	Q7L0X0	811 aa		3.37	□□□□□ -1.87
BBS4-215	ENST00000569001	CCDC25	Q86WR0	208 aa		3.37	□□□□□ -1.87
BBS4-215	ENST00000569001	C7orf57	Q8NEG2	295 aa		3.37	□□□□□ -1.87
BBS4-215	ENST00000569001	CENPI	Q92674	756 aa	Predicted RBP	3.37	□□□□□ -1.87
BBS4-215	ENST00000569001	CTAGE1	Q96RT6	745 aa		3.37	□□□□□ -1.87
BBS4-215	ENST00000569001	MYD88	Q99836	296 aa		3.37	□□□□□ -1.87
BBS4-215	ENST00000569001	POLDIP3	Q9BY77	421 aa	Known RBP	3.37	□□□□□ -1.87
BBS4-215	ENST00000569001	STK33	Q9BYT3	514 aa		3.37	□□□□□ -1.87
BBS4-215	ENST00000569001	FRMD8	Q9BZ67	464 aa	Predicted RBP	3.37	□□□□□ -1.87
BBS4-215	ENST00000569001	SFXN1	Q9H9B4	322 aa		3.37	□□□□□ -1.87
BBS4-215	ENST00000569001	ERVK-5	Q9HDB9	667 aa		3.37	□□□□□ -1.87
BBS4-215	ENST00000569001	TXNRD2	Q9NNW7	524 aa		3.37	□□□□□ -1.87
BBS4-215	ENST00000569001	CA14	Q9ULX7	337 aa		3.37	□□□□□ -1.87
BBS4-215	ENST00000569001	TTC3	P53804	2025 aa		3.37	□□□□□ -1.87
BBS4-215	ENST00000569001	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	3.37	□□□□□ -1.87
BBS4-215	ENST00000569001	TBC1D3D	A0A087WVF3	549 aa		3.36	□□□□□ -1.87
BBS4-215	ENST00000569001	TBC1D3I	A0A087WXS9	549 aa		3.36	□□□□□ -1.87
BBS4-215	ENST00000569001	TBC1D3E	A0A087X179	549 aa		3.36	□□□□□ -1.87
BBS4-215	ENST00000569001	TBC1D3K	A0A087X1G2	549 aa		3.36	□□□□□ -1.87
BBS4-215	ENST00000569001	TBC1D3B	A6NDS4	549 aa		3.36	□□□□□ -1.87
BBS4-215	ENST00000569001	TBC1D3F	A6NER0	549 aa	Predicted RBP	3.36	□□□□□ -1.87
BBS4-215	ENST00000569001	SLC38A8	A6NNN8	435 aa		3.36	□□□□□ -1.87
BBS4-215	ENST00000569001	C4orf47	A7E2U8	309 aa		3.36	□□□□□ -1.87
BBS4-215	ENST00000569001	TBC1D3L	B9A6J9	549 aa		3.36	□□□□□ -1.87
BBS4-215	ENST00000569001	MDM4	O15151	490 aa		3.36	□□□□□ -1.87
BBS4-215	ENST00000569001	ACAA1	P09110	424 aa	Predicted RBP	3.36	□□□□□ -1.87
BBS4-215	ENST00000569001	TBC1D3H	P0C7X1	549 aa		3.36	□□□□□ -1.87
BBS4-215	ENST00000569001	IGFBP2	P18065	325 aa		3.36	□□□□□ -1.87
BBS4-215	ENST00000569001	POLE2	P56282	527 aa		3.36	□□□□□ -1.87
BBS4-215	ENST00000569001	ZXDB	P98169	803 aa		3.36	□□□□□ -1.87
BBS4-215	ENST00000569001	TLE3	Q04726	772 aa		3.36	□□□□□ -1.87
BBS4-215	ENST00000569001	SF3A3	Q12874	501 aa	Known RBP eCLIP	3.36	□□□□□ -1.87
BBS4-215	ENST00000569001	C10orf76	Q5T2E6	689 aa		3.36	□□□□□ -1.87
BBS4-215	ENST00000569001	TBC1D3G	Q6DHY5	549 aa		3.36	□□□□□ -1.87
BBS4-215	ENST00000569001	TBC1D3C	Q6IPX1	549 aa		3.36	□□□□□ -1.87
BBS4-215	ENST00000569001	SYTL1	Q8IYJ3	562 aa		3.36	□□□□□ -1.87
BBS4-215	ENST00000569001	TBC1D3	Q8IZP1	549 aa	Predicted RBP	3.36	□□□□□ -1.87
BBS4-215	ENST00000569001	FBXL14	Q8N1E6	418 aa		3.36	□□□□□ -1.87
BBS4-215	ENST00000569001	CMAS	Q8NFW8	434 aa	Predicted RBP	3.36	□□□□□ -1.87
BBS4-215	ENST00000569001	FAM110D	Q8TAY7	271 aa	Predicted RBP	3.36	□□□□□ -1.87
BBS4-215	ENST00000569001	HMGB4	Q8WW32	186 aa		3.36	□□□□□ -1.87
BBS4-215	ENST00000569001	URB1-AS1	Q96HZ7	61 aa		3.36	□□□□□ -1.87
BBS4-215	ENST00000569001	LMLN	Q96KR4	655 aa		3.36	□□□□□ -1.87
BBS4-215	ENST00000569001	HDHD5	Q9BXW7	423 aa		3.36	□□□□□ -1.87
BBS4-215	ENST00000569001	ISCU	Q9H1K1	167 aa		3.36	□□□□□ -1.87
BBS4-215	ENST00000569001	SLCO5A1	Q9H2Y9	848 aa		3.36	□□□□□ -1.87
BBS4-215	ENST00000569001	ARNT2	Q9HBZ2	717 aa		3.36	□□□□□ -1.87
BBS4-215	ENST00000569001	CHST12	Q9NRB3	414 aa		3.36	□□□□□ -1.87
BBS4-215	ENST00000569001	TM7SF3	Q9NS93	570 aa		3.36	□□□□□ -1.87
BBS4-215	ENST00000569001	WWOX	Q9NZC7	414 aa		3.36	□□□□□ -1.87
BBS4-215	ENST00000569001	TBC1D14	Q9P2M4	693 aa		3.36	□□□□□ -1.87
BBS4-215	ENST00000569001	MAGED2	Q9UNF1	606 aa	Predicted RBP	3.36	□□□□□ -1.87
BBS4-215	ENST00000569001	CNTN6	Q9UQ52	1028 aa		3.36	□□□□□ -1.87
BBS4-215	ENST00000569001	ZBTB1	Q9Y2K1	713 aa		3.36	□□□□□ -1.87
BBS4-215	ENST00000569001	PTGDR2	Q9Y5Y4	395 aa		3.36	□□□□□ -1.87
BBS4-215	ENST00000569001	COPG1	Q9Y678	874 aa	Known RBP	3.36	□□□□□ -1.87
BBS4-215	ENST00000569001	INAFM1	C9JVW0	142 aa		3.35	□□□□□ -1.87
BBS4-215	ENST00000569001	PRR23D1	E9PI22	279 aa	Predicted RBP	3.35	□□□□□ -1.87
BBS4-215	ENST00000569001	HNRNPDL	O14979	420 aa	Known RBP	3.35	□□□□□ -1.87
BBS4-215	ENST00000569001	GLP2R	O95838	553 aa		3.35	□□□□□ -1.87
BBS4-215	ENST00000569001	IFNA2	P01563	188 aa		3.35	□□□□□ -1.87
BBS4-215	ENST00000569001	KRT18	P05783	430 aa	Known RBP	3.35	□□□□□ -1.87
BBS4-215	ENST00000569001	PRR23D2	P0DMB1	279 aa	Predicted RBP	3.35	□□□□□ -1.87
BBS4-215	ENST00000569001	LYL1	P12980	280 aa		3.35	□□□□□ -1.87
BBS4-215	ENST00000569001	TBXAS1	P24557	533 aa	Predicted RBP	3.35	□□□□□ -1.87
BBS4-215	ENST00000569001	KLRC2	P26717	231 aa		3.35	□□□□□ -1.87
BBS4-215	ENST00000569001	SERPINB3	P29508	390 aa		3.35	□□□□□ -1.87
BBS4-215	ENST00000569001	PPM1A	P35813	382 aa		3.35	□□□□□ -1.87
BBS4-215	ENST00000569001	PGGT1B	P53609	377 aa		3.35	□□□□□ -1.87
BBS4-215	ENST00000569001	PICALM	Q13492	652 aa		3.35	□□□□□ -1.87
BBS4-215	ENST00000569001	STARD3	Q14849	445 aa		3.35	□□□□□ -1.87
BBS4-215	ENST00000569001	INO80D	Q53TQ3	878 aa	Predicted RBP	3.35	□□□□□ -1.87
BBS4-215	ENST00000569001	TTC39A	Q5SRH9	613 aa		3.35	□□□□□ -1.87
BBS4-215	ENST00000569001	ARL6IP4	Q66PJ3	421 aa	Known RBP	3.35	□□□□□ -1.87
BBS4-215	ENST00000569001	SLC16A12	Q6ZSM3	486 aa		3.35	□□□□□ -1.87
BBS4-215	ENST00000569001	RNF144B	Q7Z419	303 aa		3.35	□□□□□ -1.87
BBS4-215	ENST00000569001	KDELC2	Q7Z4H8	507 aa		3.35	□□□□□ -1.87
BBS4-215	ENST00000569001	LRRC57	Q8N9N7	239 aa		3.35	□□□□□ -1.87
BBS4-215	ENST00000569001	SMRP1	Q8NCR6	262 aa		3.35	□□□□□ -1.87
BBS4-215	ENST00000569001	TMEM120A	Q9BXJ8	343 aa		3.35	□□□□□ -1.87
BBS4-215	ENST00000569001	ARHGAP39	Q9C0H5	1083 aa		3.35	□□□□□ -1.87
BBS4-215	ENST00000569001	OBP2B	Q9NPH6	170 aa		3.35	□□□□□ -1.87
BBS4-215	ENST00000569001	ARL15	Q9NXU5	204 aa		3.35	□□□□□ -1.87
BBS4-215	ENST00000569001	PCDHA7	Q9UN72	937 aa		3.35	□□□□□ -1.87
BBS4-215	ENST00000569001	TNFSF13B	Q9Y275	285 aa		3.35	□□□□□ -1.87
BBS4-215	ENST00000569001	PCDHA10	Q9Y5I2	948 aa		3.35	□□□□□ -1.87
BBS4-215	ENST00000569001	CYP3A7-CYP3A51P	A0A087WV96	503 aa		3.34	□□□□□ -1.87
BBS4-215	ENST00000569001	FAM90A18P	A6NE21	464 aa		3.34	□□□□□ -1.87
BBS4-215	ENST00000569001	FAM90A16P	A6NEW6	464 aa		3.34	□□□□□ -1.87
BBS4-215	ENST00000569001	FAM90A9P	A6NNJ1	464 aa		3.34	□□□□□ -1.87
BBS4-215	ENST00000569001	LGALS16	A8MUM7	142 aa		3.34	□□□□□ -1.87
BBS4-215	ENST00000569001	FAM90A5P	A8MXJ8	464 aa		3.34	□□□□□ -1.87

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