RNA–Protein interactions for RNA: ENST00000568848.5

USB1-214, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 548 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-214ENST00000568848 SUN2Q9UH99 717 aa15.4■□□□□ 0.06
USB1-214ENST00000568848 RCOR1Q9UKL0 485 aa15.4■□□□□ 0.06
USB1-214ENST00000568848 HPSEQ9Y251 543 aa15.4■□□□□ 0.06
USB1-214ENST00000568848 HECTD1Q9ULT8 2610 aa15.39■□□□□ 0.05
USB1-214ENST00000568848 C10orf142B7Z368 130 aa15.39■□□□□ 0.05
USB1-214ENST00000568848 TLR4O00206 839 aa15.39■□□□□ 0.05
USB1-214ENST00000568848 TRIM38O00635 465 aa15.39■□□□□ 0.05
USB1-214ENST00000568848 MAPK13O15264 365 aa15.39■□□□□ 0.05
USB1-214ENST00000568848 RHOBTB3O94955 611 aa15.39■□□□□ 0.05
USB1-214ENST00000568848 FYNP06241 537 aa15.39■□□□□ 0.05
USB1-214ENST00000568848 DRD3P35462 400 aa15.39■□□□□ 0.05
USB1-214ENST00000568848 ST8SIA6P61647 398 aa15.39■□□□□ 0.05
USB1-214ENST00000568848 CXADRP78310 365 aa15.39■□□□□ 0.05
USB1-214ENST00000568848 INSM1Q01101 510 aaPredicted RBP15.39■□□□□ 0.05
USB1-214ENST00000568848 INAVAQ3KP66 663 aa15.39■□□□□ 0.05
USB1-214ENST00000568848 PKDCCQ504Y2 493 aa15.39■□□□□ 0.05
USB1-214ENST00000568848 DCAF6Q58WW2 860 aa15.39■□□□□ 0.05
USB1-214ENST00000568848 TCERG1LQ5VWI1 586 aa15.39■□□□□ 0.05
USB1-214ENST00000568848 RAP1GAP2Q684P5 730 aa15.39■□□□□ 0.05
USB1-214ENST00000568848 MSANTD2Q6P1R3 559 aa15.39■□□□□ 0.05
USB1-214ENST00000568848 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP15.39■□□□□ 0.05
USB1-214ENST00000568848 UBR7Q8N806 425 aa15.39■□□□□ 0.05
USB1-214ENST00000568848 SEMA4CQ9C0C4 833 aa15.39■□□□□ 0.05
USB1-214ENST00000568848 ABCC13Q9NSE7 274 aa15.39■□□□□ 0.05
USB1-214ENST00000568848 UCKL1Q9NWZ5 548 aa15.39■□□□□ 0.05
USB1-214ENST00000568848 HESX1Q9UBX0 185 aa15.39■□□□□ 0.05
USB1-214ENST00000568848 SARDHQ9UL12 918 aa15.39■□□□□ 0.05
USB1-214ENST00000568848 NAALADL1Q9UQQ1 740 aa15.39■□□□□ 0.05
USB1-214ENST00000568848 CEP83Q9Y592 693 aa15.39■□□□□ 0.05
USB1-214ENST00000568848 M0QYV0 167 aa15.38■□□□□ 0.05
USB1-214ENST00000568848 RNF103O00237 685 aa15.38■□□□□ 0.05
USB1-214ENST00000568848 CASC3O15234 703 aaKnown RBP15.38■□□□□ 0.05
USB1-214ENST00000568848 IL1BP01584 269 aa15.38■□□□□ 0.05
USB1-214ENST00000568848 HNF1BP35680 557 aa15.38■□□□□ 0.05
USB1-214ENST00000568848 IRAK1P51617 712 aa15.38■□□□□ 0.05
USB1-214ENST00000568848 PMS1P54277 932 aaKnown RBP15.38■□□□□ 0.05
USB1-214ENST00000568848 NFIL3Q16649 462 aa15.38■□□□□ 0.05
USB1-214ENST00000568848 SFMBT2Q5VUG0 894 aa15.38■□□□□ 0.05
USB1-214ENST00000568848 LRRC69Q6ZNQ3 347 aa15.38■□□□□ 0.05
USB1-214ENST00000568848 USP30Q70CQ3 517 aa15.38■□□□□ 0.05
USB1-214ENST00000568848 TAC4Q86UU9 113 aa15.38■□□□□ 0.05
USB1-214ENST00000568848 ERICH1Q86X53 443 aa15.38■□□□□ 0.05
USB1-214ENST00000568848 HSCBQ8IWL3 235 aa15.38■□□□□ 0.05
USB1-214ENST00000568848 SPACA3Q8IXA5 215 aa15.38■□□□□ 0.05
USB1-214ENST00000568848 LGI2Q8N0V4 545 aa15.38■□□□□ 0.05
USB1-214ENST00000568848 HJURPQ8NCD3 748 aaPredicted RBP15.38■□□□□ 0.05
USB1-214ENST00000568848 ENGASEQ8NFI3 743 aa15.38■□□□□ 0.05
USB1-214ENST00000568848 FIBINQ8TAL6 211 aa15.38■□□□□ 0.05
USB1-214ENST00000568848 DQX1Q8TE96 717 aaKnown RBP15.38■□□□□ 0.05
USB1-214ENST00000568848 GOLGA1Q92805 767 aa15.38■□□□□ 0.05
USB1-214ENST00000568848 ERCC4Q92889 916 aaPredicted RBP15.38■□□□□ 0.05
USB1-214ENST00000568848 PTPRN2Q92932 1015 aa15.38■□□□□ 0.05
USB1-214ENST00000568848 CPNE5Q9HCH3 593 aa15.38■□□□□ 0.05
USB1-214ENST00000568848 PCDHGA1Q9Y5H4 931 aa15.38■□□□□ 0.05
USB1-214ENST00000568848 TBC1D3DA0A087WVF3 549 aa15.37■□□□□ 0.05
USB1-214ENST00000568848 TBC1D3IA0A087WXS9 549 aa15.37■□□□□ 0.05
USB1-214ENST00000568848 TBC1D3EA0A087X179 549 aa15.37■□□□□ 0.05
USB1-214ENST00000568848 TBC1D3KA0A087X1G2 549 aa15.37■□□□□ 0.05
USB1-214ENST00000568848 TRIM49BA6NDI0 452 aa15.37■□□□□ 0.05
USB1-214ENST00000568848 TBC1D3FA6NER0 549 aaPredicted RBP15.37■□□□□ 0.05
USB1-214ENST00000568848 LRRC72A6NJI9 287 aa15.37■□□□□ 0.05
USB1-214ENST00000568848 TBC1D3LB9A6J9 549 aa15.37■□□□□ 0.05
USB1-214ENST00000568848 FFAR2O15552 330 aa15.37■□□□□ 0.05
USB1-214ENST00000568848 SIGLEC6O43699 453 aa15.37■□□□□ 0.05
USB1-214ENST00000568848 LTFP02788 710 aa15.37■□□□□ 0.05
USB1-214ENST00000568848 TBC1D3HP0C7X1 549 aa15.37■□□□□ 0.05
USB1-214ENST00000568848 PDGFRAP16234 1089 aa15.37■□□□□ 0.05
USB1-214ENST00000568848 GLDCP23378 1020 aa15.37■□□□□ 0.05
USB1-214ENST00000568848 MZF1P28698 734 aaPredicted RBP15.37■□□□□ 0.05
USB1-214ENST00000568848 GGCXP38435 758 aa15.37■□□□□ 0.05
USB1-214ENST00000568848 SLC8A3P57103 927 aa15.37■□□□□ 0.05
USB1-214ENST00000568848 TLE3Q04726 772 aa15.37■□□□□ 0.05
USB1-214ENST00000568848 CDH18Q13634 790 aa15.37■□□□□ 0.05
USB1-214ENST00000568848 MS4A13Q5J8X5 152 aa15.37■□□□□ 0.05
USB1-214ENST00000568848 TBC1D3GQ6DHY5 549 aa15.37■□□□□ 0.05
USB1-214ENST00000568848 TBC1D3CQ6IPX1 549 aa15.37■□□□□ 0.05
USB1-214ENST00000568848 TMC6Q7Z403 805 aa15.37■□□□□ 0.05
USB1-214ENST00000568848 TBC1D3Q8IZP1 549 aaPredicted RBP15.37■□□□□ 0.05
USB1-214ENST00000568848 FBRSQ9HAH7 460 aa15.37■□□□□ 0.05
USB1-214ENST00000568848 FZD3Q9NPG1 666 aa15.37■□□□□ 0.05
USB1-214ENST00000568848 ARHGAP20Q9P2F6 1191 aa15.37■□□□□ 0.05
USB1-214ENST00000568848 MYO18BQ8IUG5 2567 aa15.37■□□□□ 0.05
USB1-214ENST00000568848 PMS2P1A4D2B8 440 aa15.36■□□□□ 0.05
USB1-214ENST00000568848 RNASEH1O60930 286 aaKnown RBP15.36■□□□□ 0.05
USB1-214ENST00000568848 LUC7L3O95232 432 aaKnown RBP15.36■□□□□ 0.05
USB1-214ENST00000568848 LATS1O95835 1130 aa15.36■□□□□ 0.05
USB1-214ENST00000568848 MPOP05164 745 aa15.36■□□□□ 0.05
USB1-214ENST00000568848 PRLRP16471 622 aa15.36■□□□□ 0.05
USB1-214ENST00000568848 CMA1P23946 247 aa15.36■□□□□ 0.05
USB1-214ENST00000568848 GTF2H1P32780 548 aa15.36■□□□□ 0.05
USB1-214ENST00000568848 SYKP43405 635 aa15.36■□□□□ 0.05
USB1-214ENST00000568848 SLC11A2P49281 568 aa15.36■□□□□ 0.05
USB1-214ENST00000568848 RTP5Q14D33 572 aa15.36■□□□□ 0.05
USB1-214ENST00000568848 PROX2Q3B8N5 592 aa15.36■□□□□ 0.05
USB1-214ENST00000568848 ZC3H12AQ5D1E8 599 aaKnown RBP15.36■□□□□ 0.05
USB1-214ENST00000568848 SYPL2Q5VXT5 272 aa15.36■□□□□ 0.05
USB1-214ENST00000568848 TMEM270Q6UE05 265 aa15.36■□□□□ 0.05
USB1-214ENST00000568848 ZNF605Q86T29 641 aa15.36■□□□□ 0.05
USB1-214ENST00000568848 GUF1Q8N442 669 aaKnown RBP15.36■□□□□ 0.05
USB1-214ENST00000568848 OR52K2Q8NGK3 314 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms