RNA–Protein interactions for RNA: ENST00000568676.5

HERPUD1-215, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 571 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-215ENST00000568676 ERVW-1Q9UQF0 538 aa16.32■□□□□ 0.2
HERPUD1-215ENST00000568676 GOLGA6L7A0A1B0GV03 622 aa16.31■□□□□ 0.2
HERPUD1-215ENST00000568676 A0A1W2PQ27 194 aa16.31■□□□□ 0.2
HERPUD1-215ENST00000568676 A0A1W2PQ64 194 aa16.31■□□□□ 0.2
HERPUD1-215ENST00000568676 A0A1W2PR77 199 aa16.31■□□□□ 0.2
HERPUD1-215ENST00000568676 WNT1P04628 370 aa16.31■□□□□ 0.2
HERPUD1-215ENST00000568676 ECT2LQ008S8 904 aa16.31■□□□□ 0.2
HERPUD1-215ENST00000568676 SLC12A1Q13621 1099 aa16.31■□□□□ 0.2
HERPUD1-215ENST00000568676 ELAVL3Q14576 367 aaKnown RBP16.31■□□□□ 0.2
HERPUD1-215ENST00000568676 COBLL1Q53SF7 1204 aa16.31■□□□□ 0.2
HERPUD1-215ENST00000568676 MS4A13Q5J8X5 152 aa16.31■□□□□ 0.2
HERPUD1-215ENST00000568676 PITRM1Q5JRX3 1037 aa16.31■□□□□ 0.2
HERPUD1-215ENST00000568676 BEND5Q7L4P6 421 aa16.31■□□□□ 0.2
HERPUD1-215ENST00000568676 IQCHQ86VS3 1027 aa16.31■□□□□ 0.2
HERPUD1-215ENST00000568676 MMAAQ8IVH4 418 aaKnown RBP16.31■□□□□ 0.2
HERPUD1-215ENST00000568676 UBR7Q8N806 425 aa16.31■□□□□ 0.2
HERPUD1-215ENST00000568676 MFSD2AQ8NA29 543 aa16.31■□□□□ 0.2
HERPUD1-215ENST00000568676 TSC1Q92574 1164 aa16.31■□□□□ 0.2
HERPUD1-215ENST00000568676 SERAC1Q96JX3 654 aa16.31■□□□□ 0.2
HERPUD1-215ENST00000568676 PRICKLE1Q96MT3 831 aaPredicted RBP16.31■□□□□ 0.2
HERPUD1-215ENST00000568676 GTPBP4Q9BZE4 634 aaKnown RBP16.31■□□□□ 0.2
HERPUD1-215ENST00000568676 SERGEFQ9UGK8 458 aa16.31■□□□□ 0.2
HERPUD1-215ENST00000568676 INTS6Q9UL03 887 aaKnown RBP16.31■□□□□ 0.2
HERPUD1-215ENST00000568676 AK5Q9Y6K8 562 aa16.31■□□□□ 0.2
HERPUD1-215ENST00000568676 GOLGA4Q13439 2230 aaKnown RBP16.31■□□□□ 0.2
HERPUD1-215ENST00000568676 TLR4O00206 839 aa16.3■□□□□ 0.2
HERPUD1-215ENST00000568676 ATXN7O15265 892 aaPredicted RBP16.3■□□□□ 0.2
HERPUD1-215ENST00000568676 LATO43561 262 aa16.3■□□□□ 0.2
HERPUD1-215ENST00000568676 LUC7L3O95232 432 aaKnown RBP16.3■□□□□ 0.2
HERPUD1-215ENST00000568676 ADPRHP54922 357 aa16.3■□□□□ 0.2
HERPUD1-215ENST00000568676 NXPH1P58417 271 aa16.3■□□□□ 0.2
HERPUD1-215ENST00000568676 SULT2A1Q06520 285 aa16.3■□□□□ 0.2
HERPUD1-215ENST00000568676 PKP1Q13835 747 aa16.3■□□□□ 0.2
HERPUD1-215ENST00000568676 KCNJ12Q14500 433 aa16.3■□□□□ 0.2
HERPUD1-215ENST00000568676 SHBQ15464 509 aa16.3■□□□□ 0.2
HERPUD1-215ENST00000568676 SFMBT2Q5VUG0 894 aa16.3■□□□□ 0.2
HERPUD1-215ENST00000568676 NADSYN1Q6IA69 706 aa16.3■□□□□ 0.2
HERPUD1-215ENST00000568676 NAPEPLDQ6IQ20 393 aa16.3■□□□□ 0.2
HERPUD1-215ENST00000568676 PMF1Q6P1K2 205 aa16.3■□□□□ 0.2
HERPUD1-215ENST00000568676 FBXL19Q6PCT2 694 aa16.3■□□□□ 0.2
HERPUD1-215ENST00000568676 CARNMT1Q8N4J0 409 aa16.3■□□□□ 0.2
HERPUD1-215ENST00000568676 SNIP1Q8TAD8 396 aaKnown RBP16.3■□□□□ 0.2
HERPUD1-215ENST00000568676 PIP4K2CQ8TBX8 421 aa16.3■□□□□ 0.2
HERPUD1-215ENST00000568676 FCRL2Q96LA5 508 aaPredicted RBP16.3■□□□□ 0.2
HERPUD1-215ENST00000568676 SCAND2PQ9GZW5 306 aaPredicted RBP16.3■□□□□ 0.2
HERPUD1-215ENST00000568676 MTG2Q9H4K7 406 aa16.3■□□□□ 0.2
HERPUD1-215ENST00000568676 PRORYQ9H606 182 aa16.3■□□□□ 0.2
HERPUD1-215ENST00000568676 EBF2Q9HAK2 575 aa16.3■□□□□ 0.2
HERPUD1-215ENST00000568676 ARMCX3Q9UH62 379 aaPredicted RBP16.3■□□□□ 0.2
HERPUD1-215ENST00000568676 DMTF1Q9Y222 760 aa16.3■□□□□ 0.2
HERPUD1-215ENST00000568676 CEP83Q9Y592 693 aa16.3■□□□□ 0.2
HERPUD1-215ENST00000568676 PLXNA2O75051 1894 aa16.29■□□□□ 0.2
HERPUD1-215ENST00000568676 PMM2O15305 246 aa16.29■□□□□ 0.2
HERPUD1-215ENST00000568676 SLC7A4O43246 635 aa16.29■□□□□ 0.2
HERPUD1-215ENST00000568676 CKMT2P17540 419 aa16.29■□□□□ 0.2
HERPUD1-215ENST00000568676 OXCT1P55809 520 aa16.29■□□□□ 0.2
HERPUD1-215ENST00000568676 RPS24P62847 133 aaKnown RBP16.29■□□□□ 0.2
HERPUD1-215ENST00000568676 LRRC63Q05C16 580 aa16.29■□□□□ 0.2
HERPUD1-215ENST00000568676 TARDBPQ13148 414 aaKnown RBP eCLIP16.29■□□□□ 0.2
HERPUD1-215ENST00000568676 DNAJC3Q13217 504 aa16.29■□□□□ 0.2
HERPUD1-215ENST00000568676 HES3Q5TGS1 186 aa16.29■□□□□ 0.2
HERPUD1-215ENST00000568676 TMEM270Q6UE05 265 aa16.29■□□□□ 0.2
HERPUD1-215ENST00000568676 DSG4Q86SJ6 1040 aa16.29■□□□□ 0.2
HERPUD1-215ENST00000568676 PRPF39Q86UA1 669 aaKnown RBP16.29■□□□□ 0.2
HERPUD1-215ENST00000568676 EID2Q8N6I1 236 aa16.29■□□□□ 0.2
HERPUD1-215ENST00000568676 OR14C36Q8NHC7 312 aa16.29■□□□□ 0.2
HERPUD1-215ENST00000568676 RFFLQ8WZ73 363 aa16.29■□□□□ 0.2
HERPUD1-215ENST00000568676 SLC39A7Q92504 469 aa16.29■□□□□ 0.2
HERPUD1-215ENST00000568676 SLC35C1Q96A29 364 aa16.29■□□□□ 0.2
HERPUD1-215ENST00000568676 FAM131CQ96AQ9 280 aa16.29■□□□□ 0.2
HERPUD1-215ENST00000568676 SLC39A13Q96H72 371 aa16.29■□□□□ 0.2
HERPUD1-215ENST00000568676 NT5C1BQ96P26 610 aa16.29■□□□□ 0.2
HERPUD1-215ENST00000568676 PPP1R9BQ96SB3 815 aa16.29■□□□□ 0.2
HERPUD1-215ENST00000568676 FAM129BQ96TA1 746 aa16.29■□□□□ 0.2
HERPUD1-215ENST00000568676 METTL14Q9HCE5 456 aaKnown RBP16.29■□□□□ 0.2
HERPUD1-215ENST00000568676 ATP6V1DQ9Y5K8 247 aa16.29■□□□□ 0.2
HERPUD1-215ENST00000568676 CAPN8A6NHC0 703 aa16.28■□□□□ 0.2
HERPUD1-215ENST00000568676 TTC34A8MYJ7 566 aa16.28■□□□□ 0.2
HERPUD1-215ENST00000568676 M0QYV0 167 aa16.28■□□□□ 0.2
HERPUD1-215ENST00000568676 ZNF202O95125 648 aa16.28■□□□□ 0.2
HERPUD1-215ENST00000568676 APOEP02649 317 aa16.28■□□□□ 0.2
HERPUD1-215ENST00000568676 PSMD8P48556 350 aa16.28■□□□□ 0.2
HERPUD1-215ENST00000568676 RGS7P49802 495 aa16.28■□□□□ 0.2
HERPUD1-215ENST00000568676 VASPP50552 380 aaPredicted RBP16.28■□□□□ 0.2
HERPUD1-215ENST00000568676 NUCB2P80303 420 aa16.28■□□□□ 0.2
HERPUD1-215ENST00000568676 SEMG2Q02383 582 aa16.28■□□□□ 0.2
HERPUD1-215ENST00000568676 CETN1Q12798 172 aa16.28■□□□□ 0.2
HERPUD1-215ENST00000568676 PRAMEF14Q5SWL7 426 aa16.28■□□□□ 0.2
HERPUD1-215ENST00000568676 AADATQ8N5Z0 425 aa16.28■□□□□ 0.2
HERPUD1-215ENST00000568676 ADAM32Q8TC27 787 aa16.28■□□□□ 0.2
HERPUD1-215ENST00000568676 DQX1Q8TE96 717 aaKnown RBP16.28■□□□□ 0.2
HERPUD1-215ENST00000568676 TFAP2BQ92481 460 aa16.28■□□□□ 0.2
HERPUD1-215ENST00000568676 FGF11Q92914 225 aa16.28■□□□□ 0.2
HERPUD1-215ENST00000568676 PTPRN2Q92932 1015 aa16.28■□□□□ 0.2
HERPUD1-215ENST00000568676 CRELD1Q96HD1 420 aa16.28■□□□□ 0.2
HERPUD1-215ENST00000568676 SPAG5Q96R06 1193 aa16.28■□□□□ 0.2
HERPUD1-215ENST00000568676 TJP2Q9UDY2 1190 aa16.28■□□□□ 0.2
HERPUD1-215ENST00000568676 GCN1Q92616 2671 aaKnown RBP16.28■□□□□ 0.2
HERPUD1-215ENST00000568676 TBC1D3DA0A087WVF3 549 aa16.27■□□□□ 0.2
HERPUD1-215ENST00000568676 TBC1D3IA0A087WXS9 549 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms