RNA–Protein interactions for RNA: ENST00000568373.5

SMPD3-211, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-211ENST00000568373 BFSP2Q13515 415 aa18.59■□□□□ 0.57
SMPD3-211ENST00000568373 PPP2R5DQ14738 602 aa18.59■□□□□ 0.57
SMPD3-211ENST00000568373 ZNF276Q8N554 614 aa18.59■□□□□ 0.57
SMPD3-211ENST00000568373 DNAJC5GQ8N7S2 189 aa18.59■□□□□ 0.57
SMPD3-211ENST00000568373 ZNF75CPQ92670 426 aaPredicted RBP18.59■□□□□ 0.57
SMPD3-211ENST00000568373 TTC17Q96AE7 1141 aa18.59■□□□□ 0.57
SMPD3-211ENST00000568373 C8orf48Q96LL4 319 aa18.59■□□□□ 0.57
SMPD3-211ENST00000568373 C12orf65Q9H3J6 166 aaKnown RBP18.59■□□□□ 0.57
SMPD3-211ENST00000568373 ABCF3Q9NUQ8 709 aa18.59■□□□□ 0.57
SMPD3-211ENST00000568373 SCML2Q9UQR0 700 aa18.59■□□□□ 0.57
SMPD3-211ENST00000568373 ENPP3O14638 875 aa18.59■□□□□ 0.57
SMPD3-211ENST00000568373 EDF1O60869 148 aaKnown RBP18.59■□□□□ 0.57
SMPD3-211ENST00000568373 DHRS4L1P0CG22 281 aa18.59■□□□□ 0.57
SMPD3-211ENST00000568373 HOXC13P31276 330 aa18.59■□□□□ 0.57
SMPD3-211ENST00000568373 CD68P34810 354 aaPredicted RBP18.59■□□□□ 0.57
SMPD3-211ENST00000568373 HTR7P34969 479 aa18.59■□□□□ 0.57
SMPD3-211ENST00000568373 ETV4P43268 484 aa18.59■□□□□ 0.57
SMPD3-211ENST00000568373 SCTRP47872 440 aa18.59■□□□□ 0.57
SMPD3-211ENST00000568373 SERPINB9P50453 376 aa18.59■□□□□ 0.57
SMPD3-211ENST00000568373 ZNF33AQ06730 810 aa18.59■□□□□ 0.57
SMPD3-211ENST00000568373 GPNMBQ14956 572 aa18.59■□□□□ 0.57
SMPD3-211ENST00000568373 TEX44Q53QW1 395 aa18.59■□□□□ 0.57
SMPD3-211ENST00000568373 PLEKHG4Q58EX7 1191 aa18.59■□□□□ 0.57
SMPD3-211ENST00000568373 ITPRIPL1Q6GPH6 555 aa18.59■□□□□ 0.57
SMPD3-211ENST00000568373 NUP93Q8N1F7 819 aa18.59■□□□□ 0.57
SMPD3-211ENST00000568373 DBF4BQ8NFT6 615 aa18.59■□□□□ 0.57
SMPD3-211ENST00000568373 DPF3Q92784 378 aa18.59■□□□□ 0.57
SMPD3-211ENST00000568373 CELF6Q96J87 481 aaKnown RBP18.59■□□□□ 0.57
SMPD3-211ENST00000568373 AGAP3Q96P47 875 aa18.59■□□□□ 0.57
SMPD3-211ENST00000568373 SYBUQ9NX95 663 aa18.59■□□□□ 0.57
SMPD3-211ENST00000568373 ADAM28Q9UKQ2 775 aa18.59■□□□□ 0.57
SMPD3-211ENST00000568373 PCDHB7Q9Y5E2 793 aa18.59■□□□□ 0.57
SMPD3-211ENST00000568373 ERI2A8K979 691 aaKnown RBP18.58■□□□□ 0.57
SMPD3-211ENST00000568373 COG7P83436 770 aa18.58■□□□□ 0.57
SMPD3-211ENST00000568373 CRYMQ14894 314 aa18.58■□□□□ 0.57
SMPD3-211ENST00000568373 DDR2Q16832 855 aa18.58■□□□□ 0.57
SMPD3-211ENST00000568373 MANEALQ5VSG8 457 aa18.58■□□□□ 0.57
SMPD3-211ENST00000568373 SDHAF4Q5VUM1 108 aa18.58■□□□□ 0.57
SMPD3-211ENST00000568373 MON1AQ86VX9 555 aa18.58■□□□□ 0.57
SMPD3-211ENST00000568373 FAM126BQ8IXS8 530 aa18.58■□□□□ 0.57
SMPD3-211ENST00000568373 CCDC63Q8NA47 563 aa18.58■□□□□ 0.57
SMPD3-211ENST00000568373 KLHL14Q9P2G3 628 aa18.58■□□□□ 0.57
SMPD3-211ENST00000568373 PCDHB5Q9Y5E4 795 aa18.58■□□□□ 0.57
SMPD3-211ENST00000568373 PLXNA3P51805 1871 aa18.58■□□□□ 0.56
SMPD3-211ENST00000568373 COPEO14579 308 aa18.58■□□□□ 0.56
SMPD3-211ENST00000568373 FGF10O15520 208 aaPredicted RBP18.58■□□□□ 0.56
SMPD3-211ENST00000568373 RFPL1O75677 317 aa18.58■□□□□ 0.56
SMPD3-211ENST00000568373 MAGEA11P43364 429 aa18.58■□□□□ 0.56
SMPD3-211ENST00000568373 GPR15P49685 360 aa18.58■□□□□ 0.56
SMPD3-211ENST00000568373 NIPAL4Q0D2K0 466 aa18.58■□□□□ 0.56
SMPD3-211ENST00000568373 BMPR2Q13873 1038 aa18.58■□□□□ 0.56
SMPD3-211ENST00000568373 MRPL58Q14197 206 aaKnown RBP18.58■□□□□ 0.56
SMPD3-211ENST00000568373 CTXN3Q4LDR2 81 aa18.58■□□□□ 0.56
SMPD3-211ENST00000568373 FAM171A1Q5VUB5 890 aa18.58■□□□□ 0.56
SMPD3-211ENST00000568373 RNF43Q68DV7 783 aa18.58■□□□□ 0.56
SMPD3-211ENST00000568373 KCTD11Q693B1 232 aa18.58■□□□□ 0.56
SMPD3-211ENST00000568373 MARK2Q7KZI7 788 aaKnown RBP18.58■□□□□ 0.56
SMPD3-211ENST00000568373 UNC5BQ8IZJ1 945 aa18.58■□□□□ 0.56
SMPD3-211ENST00000568373 STKLD1Q8NE28 680 aa18.58■□□□□ 0.56
SMPD3-211ENST00000568373 FCRL2Q96LA5 508 aaPredicted RBP18.58■□□□□ 0.56
SMPD3-211ENST00000568373 SERPINB11Q96P15 392 aa18.58■□□□□ 0.56
SMPD3-211ENST00000568373 SEZ6LQ9BYH1 1024 aa18.58■□□□□ 0.56
SMPD3-211ENST00000568373 FBXO44Q9H4M3 255 aa18.58■□□□□ 0.56
SMPD3-211ENST00000568373 OSER1Q9NX31 292 aa18.58■□□□□ 0.56
SMPD3-211ENST00000568373 NUDT5Q9UKK9 219 aa18.58■□□□□ 0.56
SMPD3-211ENST00000568373 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.57■□□□□ 0.56
SMPD3-211ENST00000568373 HMX2A2RU54 273 aa18.57■□□□□ 0.56
SMPD3-211ENST00000568373 WDR91A4D1P6 747 aa18.57■□□□□ 0.56
SMPD3-211ENST00000568373 GSTA1P08263 222 aa18.57■□□□□ 0.56
SMPD3-211ENST00000568373 CNTFP26441 200 aa18.57■□□□□ 0.56
SMPD3-211ENST00000568373 CCNFP41002 786 aa18.57■□□□□ 0.56
SMPD3-211ENST00000568373 ARHGEF6Q15052 776 aa18.57■□□□□ 0.56
SMPD3-211ENST00000568373 CEP57Q86XR8 500 aa18.57■□□□□ 0.56
SMPD3-211ENST00000568373 OR52K1Q8NGK4 314 aa18.57■□□□□ 0.56
SMPD3-211ENST00000568373 ZSCAN18Q8TBC5 510 aaPredicted RBP18.57■□□□□ 0.56
SMPD3-211ENST00000568373 CDKL2Q92772 493 aa18.57■□□□□ 0.56
SMPD3-211ENST00000568373 TBC1D31Q96DN5 1066 aa18.57■□□□□ 0.56
SMPD3-211ENST00000568373 TEKT5Q96M29 485 aa18.57■□□□□ 0.56
SMPD3-211ENST00000568373 CASD1Q96PB1 797 aa18.57■□□□□ 0.56
SMPD3-211ENST00000568373 PGLYRP2Q96PD5 576 aa18.57■□□□□ 0.56
SMPD3-211ENST00000568373 FAM111AQ96PZ2 611 aa18.57■□□□□ 0.56
SMPD3-211ENST00000568373 SRPK1Q96SB4 655 aaKnown RBP18.57■□□□□ 0.56
SMPD3-211ENST00000568373 CATSPERBQ9H7T0 1116 aa18.57■□□□□ 0.56
SMPD3-211ENST00000568373 SLC12A4Q9UP95 1085 aa18.57■□□□□ 0.56
SMPD3-211ENST00000568373 OR6C75A6NL08 312 aa18.56■□□□□ 0.56
SMPD3-211ENST00000568373 KCNU1A8MYU2 1149 aa18.56■□□□□ 0.56
SMPD3-211ENST00000568373 H0YHG0 523 aa18.56■□□□□ 0.56
SMPD3-211ENST00000568373 FKTNO75072 461 aa18.56■□□□□ 0.56
SMPD3-211ENST00000568373 NFKB1P19838 968 aa18.56■□□□□ 0.56
SMPD3-211ENST00000568373 PRMT2P55345 433 aa18.56■□□□□ 0.56
SMPD3-211ENST00000568373 OLIG2Q13516 323 aa18.56■□□□□ 0.56
SMPD3-211ENST00000568373 ARTNQ5T4W7 220 aa18.56■□□□□ 0.56
SMPD3-211ENST00000568373 ZNF280DQ6N043 979 aa18.56■□□□□ 0.56
SMPD3-211ENST00000568373 CHSY1Q86X52 802 aa18.56■□□□□ 0.56
SMPD3-211ENST00000568373 TSGA13Q96PP4 275 aa18.56■□□□□ 0.56
SMPD3-211ENST00000568373 MLPHQ9BV36 600 aaPredicted RBP18.56■□□□□ 0.56
SMPD3-211ENST00000568373 GPR62Q9BZJ7 368 aa18.56■□□□□ 0.56
SMPD3-211ENST00000568373 IQCGQ9H095 443 aaKnown RBP18.56■□□□□ 0.56
SMPD3-211ENST00000568373 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.56■□□□□ 0.56
SMPD3-211ENST00000568373 CASS4Q9NQ75 786 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms