RNA–Protein interactions for RNA: ENST00000568158.1

CNOT1-213, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-213ENST00000568158 ARFGAP1Q8N6T3 406 aa13.41□□□□□ -0.26
CNOT1-213ENST00000568158 TC2NQ8N9U0 490 aa13.41□□□□□ -0.26
CNOT1-213ENST00000568158 WFIKKN2Q8TEU8 576 aa13.41□□□□□ -0.26
CNOT1-213ENST00000568158 FAM122AQ96E09 287 aa13.41□□□□□ -0.26
CNOT1-213ENST00000568158 TRIM11Q96F44 468 aa13.41□□□□□ -0.26
CNOT1-213ENST00000568158 MRFAP1L1Q96HT8 127 aa13.41□□□□□ -0.26
CNOT1-213ENST00000568158 ANP32EQ9BTT0 268 aa13.41□□□□□ -0.26
CNOT1-213ENST00000568158 FAM126AQ9BYI3 521 aaPredicted RBP13.41□□□□□ -0.26
CNOT1-213ENST00000568158 OSBPL2Q9H1P3 480 aa13.41□□□□□ -0.26
CNOT1-213ENST00000568158 NHEJ1Q9H9Q4 299 aaPredicted RBP13.41□□□□□ -0.26
CNOT1-213ENST00000568158 OR12D3Q9UGF7 316 aa13.41□□□□□ -0.26
CNOT1-213ENST00000568158 INVSQ9Y283 1065 aa13.41□□□□□ -0.26
CNOT1-213ENST00000568158 FANCMQ8IYD8 2048 aa13.4□□□□□ -0.26
CNOT1-213ENST00000568158 A0A1B0GVM2 712 aa13.4□□□□□ -0.26
CNOT1-213ENST00000568158 A0A1W2PQF6 199 aa13.4□□□□□ -0.26
CNOT1-213ENST00000568158 SSU72P8A0A1W2PR75 194 aa13.4□□□□□ -0.26
CNOT1-213ENST00000568158 TCAF2A6NFQ2 919 aa13.4□□□□□ -0.26
CNOT1-213ENST00000568158 AXIN1O15169 862 aa13.4□□□□□ -0.26
CNOT1-213ENST00000568158 AKR1B10O60218 316 aa13.4□□□□□ -0.26
CNOT1-213ENST00000568158 LILRB5O75023 590 aa13.4□□□□□ -0.26
CNOT1-213ENST00000568158 APBB3O95704 486 aa13.4□□□□□ -0.26
CNOT1-213ENST00000568158 MYBL1P10243 752 aa13.4□□□□□ -0.26
CNOT1-213ENST00000568158 CSKP41240 450 aa13.4□□□□□ -0.26
CNOT1-213ENST00000568158 CTSOP43234 321 aaPredicted RBP13.4□□□□□ -0.26
CNOT1-213ENST00000568158 CDH4P55283 916 aa13.4□□□□□ -0.26
CNOT1-213ENST00000568158 ZNF252P-AS1Q0IIN9 211 aa13.4□□□□□ -0.26
CNOT1-213ENST00000568158 SLC18A3Q16572 532 aa13.4□□□□□ -0.26
CNOT1-213ENST00000568158 PITRM1Q5JRX3 1037 aa13.4□□□□□ -0.26
CNOT1-213ENST00000568158 ANO7Q6IWH7 933 aa13.4□□□□□ -0.26
CNOT1-213ENST00000568158 CXorf57Q6NSI4 855 aaKnown RBP13.4□□□□□ -0.26
CNOT1-213ENST00000568158 SLFN11Q7Z7L1 901 aa13.4□□□□□ -0.26
CNOT1-213ENST00000568158 WDR5BQ86VZ2 330 aa13.4□□□□□ -0.26
CNOT1-213ENST00000568158 CNGA4Q8IV77 575 aa13.4□□□□□ -0.26
CNOT1-213ENST00000568158 AHI1Q8N157 1196 aa13.4□□□□□ -0.26
CNOT1-213ENST00000568158 ZNF366Q8N895 744 aa13.4□□□□□ -0.26
CNOT1-213ENST00000568158 TSTD1Q8NFU3 115 aa13.4□□□□□ -0.26
CNOT1-213ENST00000568158 TTC17Q96AE7 1141 aa13.4□□□□□ -0.26
CNOT1-213ENST00000568158 ALG14Q96F25 216 aa13.4□□□□□ -0.26
CNOT1-213ENST00000568158 BTBD6Q96KE9 485 aa13.4□□□□□ -0.26
CNOT1-213ENST00000568158 CCDC42Q96M95 316 aa13.4□□□□□ -0.26
CNOT1-213ENST00000568158 PACSIN1Q9BY11 444 aa13.4□□□□□ -0.26
CNOT1-213ENST00000568158 TPSD1Q9BZJ3 242 aa13.4□□□□□ -0.26
CNOT1-213ENST00000568158 DEF6Q9H4E7 631 aa13.4□□□□□ -0.26
CNOT1-213ENST00000568158 MRPL47Q9HD33 250 aaKnown RBP13.4□□□□□ -0.26
CNOT1-213ENST00000568158 POLMQ9NP87 494 aaPredicted RBP13.4□□□□□ -0.26
CNOT1-213ENST00000568158 SPTLC3Q9NUV7 552 aa13.4□□□□□ -0.26
CNOT1-213ENST00000568158 PCSK1NQ9UHG2 260 aa13.4□□□□□ -0.26
CNOT1-213ENST00000568158 FZD10Q9ULW2 581 aa13.4□□□□□ -0.26
CNOT1-213ENST00000568158 PLA2G4CQ9UP65 541 aa13.4□□□□□ -0.26
CNOT1-213ENST00000568158 PCDHGA2Q9Y5H1 932 aa13.4□□□□□ -0.26
CNOT1-213ENST00000568158 CACNA1HO95180 2353 aa13.39□□□□□ -0.27
CNOT1-213ENST00000568158 IGLV3-10A0A075B6K4 115 aa13.39□□□□□ -0.27
CNOT1-213ENST00000568158 TCRBV21S2A2A0A5A6 115 aa13.39□□□□□ -0.27
CNOT1-213ENST00000568158 CLDN11O75508 207 aa13.39□□□□□ -0.27
CNOT1-213ENST00000568158 CYP1A2P05177 515 aa13.39□□□□□ -0.27
CNOT1-213ENST00000568158 ATP5BP06576 529 aaKnown RBP13.39□□□□□ -0.27
CNOT1-213ENST00000568158 HLA-EP13747 358 aa13.39□□□□□ -0.27
CNOT1-213ENST00000568158 PRKCHP24723 683 aa13.39□□□□□ -0.27
CNOT1-213ENST00000568158 PLK1P53350 603 aa13.39□□□□□ -0.27
CNOT1-213ENST00000568158 ENPP2Q13822 863 aa13.39□□□□□ -0.27
CNOT1-213ENST00000568158 EIF4HQ15056 248 aaKnown RBP13.39□□□□□ -0.27
CNOT1-213ENST00000568158 PTPRNQ16849 979 aa13.39□□□□□ -0.27
CNOT1-213ENST00000568158 PLEKHG6Q3KR16 790 aa13.39□□□□□ -0.27
CNOT1-213ENST00000568158 TTC39BQ5VTQ0 682 aaPredicted RBP13.39□□□□□ -0.27
CNOT1-213ENST00000568158 DAB2IPQ5VWQ8 1189 aa13.39□□□□□ -0.27
CNOT1-213ENST00000568158 RNF219Q5W0B1 726 aaPredicted RBP13.39□□□□□ -0.27
CNOT1-213ENST00000568158 PGBD3Q8N328 593 aa13.39□□□□□ -0.27
CNOT1-213ENST00000568158 ZNF557Q8N988 423 aaPredicted RBP13.39□□□□□ -0.27
CNOT1-213ENST00000568158 GABRG3Q99928 467 aa13.39□□□□□ -0.27
CNOT1-213ENST00000568158 NUP85Q9BW27 656 aa13.39□□□□□ -0.27
CNOT1-213ENST00000568158 MTG2Q9H4K7 406 aa13.39□□□□□ -0.27
CNOT1-213ENST00000568158 CD248Q9HCU0 757 aa13.39□□□□□ -0.27
CNOT1-213ENST00000568158 GPATCH2LQ9NWQ4 482 aa13.39□□□□□ -0.27
CNOT1-213ENST00000568158 EBF1Q9UH73 591 aa13.39□□□□□ -0.27
CNOT1-213ENST00000568158 SCINQ9Y6U3 715 aa13.39□□□□□ -0.27
CNOT1-213ENST00000568158 EML5Q05BV3 1969 aa13.39□□□□□ -0.27
CNOT1-213ENST00000568158 DOCK4Q8N1I0 1966 aa13.39□□□□□ -0.27
CNOT1-213ENST00000568158 PROB1E7EW31 1015 aa13.38□□□□□ -0.27
CNOT1-213ENST00000568158 RNF8O76064 485 aa13.38□□□□□ -0.27
CNOT1-213ENST00000568158 MOCS3O95396 460 aa13.38□□□□□ -0.27
CNOT1-213ENST00000568158 EPHX1P07099 455 aa13.38□□□□□ -0.27
CNOT1-213ENST00000568158 DLDP09622 509 aaKnown RBP13.38□□□□□ -0.27
CNOT1-213ENST00000568158 GABRG2P18507 467 aa13.38□□□□□ -0.27
CNOT1-213ENST00000568158 PLA2G5P39877 138 aa13.38□□□□□ -0.27
CNOT1-213ENST00000568158 SLC12A1Q13621 1099 aa13.38□□□□□ -0.27
CNOT1-213ENST00000568158 FNDC3BQ53EP0 1204 aaKnown RBP13.38□□□□□ -0.27
CNOT1-213ENST00000568158 ACBD5Q5T8D3 534 aaPredicted RBP13.38□□□□□ -0.27
CNOT1-213ENST00000568158 ZC3H14Q6PJT7 736 aaKnown RBP13.38□□□□□ -0.27
CNOT1-213ENST00000568158 SERPINA13PQ6UXR4 307 aa13.38□□□□□ -0.27
CNOT1-213ENST00000568158 TFAP2DQ7Z6R9 452 aa13.38□□□□□ -0.27
CNOT1-213ENST00000568158 RASSF3Q86WH2 238 aa13.38□□□□□ -0.27
CNOT1-213ENST00000568158 MDGA1Q8NFP4 955 aa13.38□□□□□ -0.27
CNOT1-213ENST00000568158 FNIP1Q8TF40 1166 aa13.38□□□□□ -0.27
CNOT1-213ENST00000568158 HMGB4Q8WW32 186 aa13.38□□□□□ -0.27
CNOT1-213ENST00000568158 RLN3Q8WXF3 142 aa13.38□□□□□ -0.27
CNOT1-213ENST00000568158 NTAN1Q96AB6 310 aa13.38□□□□□ -0.27
CNOT1-213ENST00000568158 MYO19Q96H55 970 aa13.38□□□□□ -0.27
CNOT1-213ENST00000568158 RPL10LQ96L21 214 aaKnown RBP13.38□□□□□ -0.27
CNOT1-213ENST00000568158 MRGPRX3Q96LB0 322 aa13.38□□□□□ -0.27
CNOT1-213ENST00000568158 PEBP4Q96S96 227 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms