RNA–Protein interactions for RNA: ENST00000568129.1

HDGFL3-205, Transcript of HDGF like 3, humanhuman

TSL 2

Gene HDGFL3, Length 426 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-205ENST00000568129 LRRC53A6NM62 1247 aa8.44□□□□□ -1.06
HDGFL3-205ENST00000568129 TM4SF5O14894 197 aa8.44□□□□□ -1.06
HDGFL3-205ENST00000568129 CLDN11O75508 207 aa8.44□□□□□ -1.06
HDGFL3-205ENST00000568129 MOCS2O96007 188 aaPredicted RBP8.44□□□□□ -1.06
HDGFL3-205ENST00000568129 KRT3P12035 628 aa8.44□□□□□ -1.06
HDGFL3-205ENST00000568129 POLR2EP19388 210 aaKnown RBP8.44□□□□□ -1.06
HDGFL3-205ENST00000568129 SDHBP21912 280 aa8.44□□□□□ -1.06
HDGFL3-205ENST00000568129 RDXP35241 583 aaKnown RBP8.44□□□□□ -1.06
HDGFL3-205ENST00000568129 RFC1P35251 1148 aaPredicted RBP8.44□□□□□ -1.06
HDGFL3-205ENST00000568129 ADRA1BP35368 520 aa8.44□□□□□ -1.06
HDGFL3-205ENST00000568129 HOXD12P35452 270 aa8.44□□□□□ -1.06
HDGFL3-205ENST00000568129 CSKP41240 450 aa8.44□□□□□ -1.06
HDGFL3-205ENST00000568129 DPP6P42658 865 aa8.44□□□□□ -1.06
HDGFL3-205ENST00000568129 WASP42768 502 aa8.44□□□□□ -1.06
HDGFL3-205ENST00000568129 NSFP46459 744 aaKnown RBP8.44□□□□□ -1.06
HDGFL3-205ENST00000568129 SULT1E1P49888 294 aa8.44□□□□□ -1.06
HDGFL3-205ENST00000568129 CDH4P55283 916 aa8.44□□□□□ -1.06
HDGFL3-205ENST00000568129 RNASE9P60153 205 aaKnown RBP8.44□□□□□ -1.06
HDGFL3-205ENST00000568129 LMNB2Q03252 620 aa8.44□□□□□ -1.06
HDGFL3-205ENST00000568129 ZBTB16Q05516 673 aa8.44□□□□□ -1.06
HDGFL3-205ENST00000568129 DEUP1Q05D60 604 aa8.44□□□□□ -1.06
HDGFL3-205ENST00000568129 SULT2A1Q06520 285 aa8.44□□□□□ -1.06
HDGFL3-205ENST00000568129 SPEM2Q0P670 501 aa8.44□□□□□ -1.06
HDGFL3-205ENST00000568129 SCAPQ12770 1279 aa8.44□□□□□ -1.06
HDGFL3-205ENST00000568129 NME3Q13232 169 aa8.44□□□□□ -1.06
HDGFL3-205ENST00000568129 STARD3Q14849 445 aa8.44□□□□□ -1.06
HDGFL3-205ENST00000568129 LPAL2Q16609 132 aa8.44□□□□□ -1.06
HDGFL3-205ENST00000568129 HNRNPA1L2Q32P51 320 aaKnown RBP8.44□□□□□ -1.06
HDGFL3-205ENST00000568129 PLEKHG6Q3KR16 790 aa8.44□□□□□ -1.06
HDGFL3-205ENST00000568129 PITRM1Q5JRX3 1037 aa8.44□□□□□ -1.06
HDGFL3-205ENST00000568129 RABGAP1LQ5R372 815 aa8.44□□□□□ -1.06
HDGFL3-205ENST00000568129 C9orf64Q5T6V5 341 aa8.44□□□□□ -1.06
HDGFL3-205ENST00000568129 MANEALQ5VSG8 457 aa8.44□□□□□ -1.06
HDGFL3-205ENST00000568129 PLEKHA7Q6IQ23 1121 aa8.44□□□□□ -1.06
HDGFL3-205ENST00000568129 PRR23CQ6ZRP0 262 aa8.44□□□□□ -1.06
HDGFL3-205ENST00000568129 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.44□□□□□ -1.06
HDGFL3-205ENST00000568129 SETD3Q86TU7 594 aaPredicted RBP8.44□□□□□ -1.06
HDGFL3-205ENST00000568129 CHSY1Q86X52 802 aa8.44□□□□□ -1.06
HDGFL3-205ENST00000568129 TMPRSS6Q8IU80 811 aa8.44□□□□□ -1.06
HDGFL3-205ENST00000568129 MCOLN2Q8IZK6 566 aa8.44□□□□□ -1.06
HDGFL3-205ENST00000568129 APCDD1Q8J025 514 aa8.44□□□□□ -1.06
HDGFL3-205ENST00000568129 CARNMT1Q8N4J0 409 aa8.44□□□□□ -1.06
HDGFL3-205ENST00000568129 FRMD1Q8N878 549 aa8.44□□□□□ -1.06
HDGFL3-205ENST00000568129 OR52K2Q8NGK3 314 aa8.44□□□□□ -1.06
HDGFL3-205ENST00000568129 JOSD2Q8TAC2 188 aa8.44□□□□□ -1.06
HDGFL3-205ENST00000568129 FRS2Q8WU20 508 aa8.44□□□□□ -1.06
HDGFL3-205ENST00000568129 RXFP2Q8WXD0 754 aa8.44□□□□□ -1.06
HDGFL3-205ENST00000568129 RLN3Q8WXF3 142 aa8.44□□□□□ -1.06
HDGFL3-205ENST00000568129 DNASE2BQ8WZ79 361 aa8.44□□□□□ -1.06
HDGFL3-205ENST00000568129 NTAN1Q96AB6 310 aa8.44□□□□□ -1.06
HDGFL3-205ENST00000568129 FAM131CQ96AQ9 280 aa8.44□□□□□ -1.06
HDGFL3-205ENST00000568129 SPACA7Q96KW9 195 aa8.44□□□□□ -1.06
HDGFL3-205ENST00000568129 PCMTD1Q96MG8 357 aaPredicted RBP8.44□□□□□ -1.06
HDGFL3-205ENST00000568129 CFAP57Q96MR6 1250 aa8.44□□□□□ -1.06
HDGFL3-205ENST00000568129 PPP1R9BQ96SB3 815 aa8.44□□□□□ -1.06
HDGFL3-205ENST00000568129 FEM1AQ9BSK4 669 aa8.44□□□□□ -1.06
HDGFL3-205ENST00000568129 CIPCQ9C0C6 399 aa8.44□□□□□ -1.06
HDGFL3-205ENST00000568129 PCED1AQ9H1Q7 454 aa8.44□□□□□ -1.06
HDGFL3-205ENST00000568129 RSPH9Q9H1X1 276 aaPredicted RBP8.44□□□□□ -1.06
HDGFL3-205ENST00000568129 ARRDC1-AS1Q9H2J1 176 aa8.44□□□□□ -1.06
HDGFL3-205ENST00000568129 PRDM16Q9HAZ2 1276 aa8.44□□□□□ -1.06
HDGFL3-205ENST00000568129 VPS45Q9NRW7 570 aa8.44□□□□□ -1.06
HDGFL3-205ENST00000568129 WSB2Q9NYS7 404 aaPredicted RBP8.44□□□□□ -1.06
HDGFL3-205ENST00000568129 STIM2Q9P246 746 aa8.44□□□□□ -1.06
HDGFL3-205ENST00000568129 EVLQ9UI08 416 aaPredicted RBP8.44□□□□□ -1.06
HDGFL3-205ENST00000568129 PILRBQ9UKJ0 227 aa8.44□□□□□ -1.06
HDGFL3-205ENST00000568129 CAPN11Q9UMQ6 739 aa8.44□□□□□ -1.06
HDGFL3-205ENST00000568129 ERVW-1Q9UQF0 538 aa8.44□□□□□ -1.06
HDGFL3-205ENST00000568129 RAD54BQ9Y620 910 aa8.44□□□□□ -1.06
HDGFL3-205ENST00000568129 CNOT1A5YKK6 2376 aaKnown RBP8.43□□□□□ -1.06
HDGFL3-205ENST00000568129 H0Y626 953 aa8.43□□□□□ -1.06
HDGFL3-205ENST00000568129 DDX3XO00571 662 aaKnown RBP eCLIP8.43□□□□□ -1.06
HDGFL3-205ENST00000568129 AP5Z1O43299 807 aa8.43□□□□□ -1.06
HDGFL3-205ENST00000568129 ATP9BO43861 1147 aa8.43□□□□□ -1.06
HDGFL3-205ENST00000568129 SYNCRIPO60506 623 aaKnown RBP8.43□□□□□ -1.06
HDGFL3-205ENST00000568129 SERPINC1P01008 464 aa8.43□□□□□ -1.06
HDGFL3-205ENST00000568129 EPHX1P07099 455 aa8.43□□□□□ -1.06
HDGFL3-205ENST00000568129 PDGFRAP16234 1089 aa8.43□□□□□ -1.06
HDGFL3-205ENST00000568129 TNFAIP3P21580 790 aa8.43□□□□□ -1.06
HDGFL3-205ENST00000568129 MZF1P28698 734 aaPredicted RBP8.43□□□□□ -1.06
HDGFL3-205ENST00000568129 OXTRP30559 389 aa8.43□□□□□ -1.06
HDGFL3-205ENST00000568129 HNRNPH3P31942 346 aaKnown RBP8.43□□□□□ -1.06
HDGFL3-205ENST00000568129 MPLP40238 635 aa8.43□□□□□ -1.06
HDGFL3-205ENST00000568129 TPMTP51580 245 aa8.43□□□□□ -1.06
HDGFL3-205ENST00000568129 IRAK1P51617 712 aa8.43□□□□□ -1.06
HDGFL3-205ENST00000568129 ZNF143P52747 638 aaPredicted RBP8.43□□□□□ -1.06
HDGFL3-205ENST00000568129 ATXN1P54253 815 aaKnown RBP8.43□□□□□ -1.06
HDGFL3-205ENST00000568129 HDAC4P56524 1084 aa8.43□□□□□ -1.06
HDGFL3-205ENST00000568129 UBASH3AP57075 661 aa8.43□□□□□ -1.06
HDGFL3-205ENST00000568129 ECT2LQ008S8 904 aa8.43□□□□□ -1.06
HDGFL3-205ENST00000568129 ARID5AQ03989 594 aa8.43□□□□□ -1.06
HDGFL3-205ENST00000568129 CDH18Q13634 790 aa8.43□□□□□ -1.06
HDGFL3-205ENST00000568129 SFMBT2Q5VUG0 894 aa8.43□□□□□ -1.06
HDGFL3-205ENST00000568129 HGSNATQ68CP4 663 aa8.43□□□□□ -1.06
HDGFL3-205ENST00000568129 SLC23A3Q6PIS1 610 aa8.43□□□□□ -1.06
HDGFL3-205ENST00000568129 WDR59Q6PJI9 974 aa8.43□□□□□ -1.06
HDGFL3-205ENST00000568129 SERPINA13PQ6UXR4 307 aa8.43□□□□□ -1.06
HDGFL3-205ENST00000568129 ZNF783Q6ZMS7 281 aa8.43□□□□□ -1.06
HDGFL3-205ENST00000568129 SND1Q7KZF4 910 aaKnown RBP eCLIP8.43□□□□□ -1.06
HDGFL3-205ENST00000568129 LPCAT2Q7L5N7 544 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms