RNA–Protein interactions for RNA: ENST00000567992.1

CLK3-220, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 603 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-220ENST00000567992 ARHGEF26Q96DR7 871 aa10.11□□□□□ -0.79
CLK3-220ENST00000567992 TRIM11Q96F44 468 aa10.11□□□□□ -0.79
CLK3-220ENST00000567992 MYO19Q96H55 970 aa10.11□□□□□ -0.79
CLK3-220ENST00000567992 MRGPRX3Q96LB0 322 aa10.11□□□□□ -0.79
CLK3-220ENST00000567992 RPRD1AQ96P16 312 aaPredicted RBP10.11□□□□□ -0.79
CLK3-220ENST00000567992 HAPLN3Q96S86 360 aa10.11□□□□□ -0.79
CLK3-220ENST00000567992 CHP1Q99653 195 aa10.11□□□□□ -0.79
CLK3-220ENST00000567992 CNPY3Q9BT09 278 aa10.11□□□□□ -0.79
CLK3-220ENST00000567992 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.11□□□□□ -0.79
CLK3-220ENST00000567992 SIK2Q9H0K1 926 aa10.11□□□□□ -0.79
CLK3-220ENST00000567992 THAP2Q9H0W7 228 aa10.11□□□□□ -0.79
CLK3-220ENST00000567992 EBF1Q9UH73 591 aa10.11□□□□□ -0.79
CLK3-220ENST00000567992 PAXBP1Q9Y5B6 917 aa10.11□□□□□ -0.79
CLK3-220ENST00000567992 RAD54BQ9Y620 910 aa10.11□□□□□ -0.79
CLK3-220ENST00000567992 STON1Q9Y6Q2 735 aa10.11□□□□□ -0.79
CLK3-220ENST00000567992 GVINP1Q7Z2Y8 2422 aa10.1□□□□□ -0.79
CLK3-220ENST00000567992 CCDC163A0A0D9SF12 145 aa10.1□□□□□ -0.79
CLK3-220ENST00000567992 E9PAM4 449 aa10.1□□□□□ -0.79
CLK3-220ENST00000567992 FAM72CH0Y354 149 aa10.1□□□□□ -0.79
CLK3-220ENST00000567992 NPC1O15118 1278 aa10.1□□□□□ -0.79
CLK3-220ENST00000567992 HRO43593 1189 aa10.1□□□□□ -0.79
CLK3-220ENST00000567992 CYP1A2P05177 515 aa10.1□□□□□ -0.79
CLK3-220ENST00000567992 CSKP41240 450 aa10.1□□□□□ -0.79
CLK3-220ENST00000567992 DGKEP52429 567 aa10.1□□□□□ -0.79
CLK3-220ENST00000567992 NRLP54845 237 aa10.1□□□□□ -0.79
CLK3-220ENST00000567992 SRSF5Q13243 272 aaKnown RBP10.1□□□□□ -0.79
CLK3-220ENST00000567992 ZNF234Q14588 700 aa10.1□□□□□ -0.79
CLK3-220ENST00000567992 GSE1Q14687 1217 aa10.1□□□□□ -0.79
CLK3-220ENST00000567992 SLC18A3Q16572 532 aa10.1□□□□□ -0.79
CLK3-220ENST00000567992 PLEKHG6Q3KR16 790 aa10.1□□□□□ -0.79
CLK3-220ENST00000567992 FAM72AQ5TYM5 149 aa10.1□□□□□ -0.79
CLK3-220ENST00000567992 ANO7Q6IWH7 933 aa10.1□□□□□ -0.79
CLK3-220ENST00000567992 FAM72DQ6L9T8 149 aa10.1□□□□□ -0.79
CLK3-220ENST00000567992 ALKBH5Q6P6C2 394 aaKnown RBP10.1□□□□□ -0.79
CLK3-220ENST00000567992 ZC3H14Q6PJT7 736 aaKnown RBP10.1□□□□□ -0.79
CLK3-220ENST00000567992 CYP4V2Q6ZWL3 525 aaPredicted RBP10.1□□□□□ -0.79
CLK3-220ENST00000567992 FAM72BQ86X60 149 aa10.1□□□□□ -0.79
CLK3-220ENST00000567992 CNGA4Q8IV77 575 aa10.1□□□□□ -0.79
CLK3-220ENST00000567992 CHPFQ8IZ52 775 aa10.1□□□□□ -0.79
CLK3-220ENST00000567992 APCDD1Q8J025 514 aa10.1□□□□□ -0.79
CLK3-220ENST00000567992 SUMF1Q8NBK3 374 aa10.1□□□□□ -0.79
CLK3-220ENST00000567992 FAM122AQ96E09 287 aa10.1□□□□□ -0.79
CLK3-220ENST00000567992 ALG14Q96F25 216 aa10.1□□□□□ -0.79
CLK3-220ENST00000567992 PEBP4Q96S96 227 aa10.1□□□□□ -0.79
CLK3-220ENST00000567992 PACSIN1Q9BY11 444 aa10.1□□□□□ -0.79
CLK3-220ENST00000567992 CIPCQ9C0C6 399 aa10.1□□□□□ -0.79
CLK3-220ENST00000567992 OSBPL2Q9H1P3 480 aa10.1□□□□□ -0.79
CLK3-220ENST00000567992 EPC1Q9H2F5 836 aa10.1□□□□□ -0.79
CLK3-220ENST00000567992 TMEM245Q9H330 911 aa10.1□□□□□ -0.79
CLK3-220ENST00000567992 MYO1AQ9UBC5 1043 aa10.1□□□□□ -0.79
CLK3-220ENST00000567992 TBC1D30Q9Y2I9 924 aa10.1□□□□□ -0.79
CLK3-220ENST00000567992 OR51B4Q9Y5P0 310 aa10.1□□□□□ -0.79
CLK3-220ENST00000567992 SCINQ9Y6U3 715 aa10.1□□□□□ -0.79
CLK3-220ENST00000567992 DMXL1Q9Y485 3027 aa10.09□□□□□ -0.79
CLK3-220ENST00000567992 LAMA1P25391 3075 aa10.09□□□□□ -0.79
CLK3-220ENST00000567992 CFAP54Q96N23 3096 aa10.09□□□□□ -0.79
CLK3-220ENST00000567992 SPAG17Q6Q759 2223 aa10.09□□□□□ -0.79
CLK3-220ENST00000567992 TCRBV21S2A2A0A5A6 115 aa10.09□□□□□ -0.79
CLK3-220ENST00000567992 PRR23AA6NEV1 266 aa10.09□□□□□ -0.79
CLK3-220ENST00000567992 AKR1B15C9JRZ8 316 aaPredicted RBP10.09□□□□□ -0.79
CLK3-220ENST00000567992 H0Y626 953 aa10.09□□□□□ -0.79
CLK3-220ENST00000567992 AXIN1O15169 862 aa10.09□□□□□ -0.79
CLK3-220ENST00000567992 TIMM44O43615 452 aa10.09□□□□□ -0.79
CLK3-220ENST00000567992 CLDN11O75508 207 aa10.09□□□□□ -0.79
CLK3-220ENST00000567992 TPM1P09493 284 aa10.09□□□□□ -0.79
CLK3-220ENST00000567992 DLDP09622 509 aaKnown RBP10.09□□□□□ -0.79
CLK3-220ENST00000567992 C7P10643 843 aa10.09□□□□□ -0.79
CLK3-220ENST00000567992 GABRG2P18507 467 aa10.09□□□□□ -0.79
CLK3-220ENST00000567992 PSMA2P25787 234 aa10.09□□□□□ -0.79
CLK3-220ENST00000567992 MZF1P28698 734 aaPredicted RBP10.09□□□□□ -0.79
CLK3-220ENST00000567992 CTSOP43234 321 aaPredicted RBP10.09□□□□□ -0.79
CLK3-220ENST00000567992 PLK1P53350 603 aa10.09□□□□□ -0.79
CLK3-220ENST00000567992 GALCP54803 685 aa10.09□□□□□ -0.79
CLK3-220ENST00000567992 CDH4P55283 916 aa10.09□□□□□ -0.79
CLK3-220ENST00000567992 SEMA3BQ13214 749 aa10.09□□□□□ -0.79
CLK3-220ENST00000567992 CCDC122Q5T0U0 273 aa10.09□□□□□ -0.79
CLK3-220ENST00000567992 ACBD5Q5T8D3 534 aaPredicted RBP10.09□□□□□ -0.79
CLK3-220ENST00000567992 DAB2IPQ5VWQ8 1189 aa10.09□□□□□ -0.79
CLK3-220ENST00000567992 ASCL5Q7RTU5 278 aa10.09□□□□□ -0.79
CLK3-220ENST00000567992 NLRP14Q86W24 1093 aa10.09□□□□□ -0.79
CLK3-220ENST00000567992 PYROXD2Q8N2H3 581 aa10.09□□□□□ -0.79
CLK3-220ENST00000567992 ATRIPQ8WXE1 791 aa10.09□□□□□ -0.79
CLK3-220ENST00000567992 ERLEC1Q96DZ1 483 aa10.09□□□□□ -0.79
CLK3-220ENST00000567992 TPSD1Q9BZJ3 242 aa10.09□□□□□ -0.79
CLK3-220ENST00000567992 NHEJ1Q9H9Q4 299 aaPredicted RBP10.09□□□□□ -0.79
CLK3-220ENST00000567992 MPP6Q9NZW5 540 aa10.09□□□□□ -0.79
CLK3-220ENST00000567992 KIAA1522Q9P206 1035 aaPredicted RBP10.09□□□□□ -0.79
CLK3-220ENST00000567992 PPARGC1AQ9UBK2 798 aaKnown RBP10.09□□□□□ -0.79
CLK3-220ENST00000567992 OR12D3Q9UGF7 316 aa10.09□□□□□ -0.79
CLK3-220ENST00000567992 FZD10Q9ULW2 581 aa10.09□□□□□ -0.79
CLK3-220ENST00000567992 TNRC6BQ9UPQ9 1833 aaKnown RBP10.09□□□□□ -0.79
CLK3-220ENST00000567992 ANKRD62A6NC57 917 aa10.08□□□□□ -0.8
CLK3-220ENST00000567992 SRGAP2O75044 1071 aa10.08□□□□□ -0.8
CLK3-220ENST00000567992 LRCH4O75427 683 aa10.08□□□□□ -0.8
CLK3-220ENST00000567992 LRIG2O94898 1065 aa10.08□□□□□ -0.8
CLK3-220ENST00000567992 HLA-EP13747 358 aa10.08□□□□□ -0.8
CLK3-220ENST00000567992 TCF4P15884 667 aa10.08□□□□□ -0.8
CLK3-220ENST00000567992 POLR2EP19388 210 aaKnown RBP10.08□□□□□ -0.8
CLK3-220ENST00000567992 NDUFV2P19404 249 aa10.08□□□□□ -0.8
CLK3-220ENST00000567992 FECHP22830 423 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms