RNA–Protein interactions for RNA: ENST00000567275.2

NIFKP4-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67 pseudogene 4, humanhuman

BASIC

Gene NIFKP4, Length 1,192 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFKP4-201ENST00000567275 VPS45Q9NRW7 570 aa9.4□□□□□ -0.9
NIFKP4-201ENST00000567275 KLHL13Q9P2N7 655 aa9.4□□□□□ -0.9
NIFKP4-201ENST00000567275 PCDHGB2Q9Y5G2 931 aa9.4□□□□□ -0.9
NIFKP4-201ENST00000567275 ZNF804BA4D1E1 1349 aa9.39□□□□□ -0.91
NIFKP4-201ENST00000567275 WDR91A4D1P6 747 aa9.39□□□□□ -0.91
NIFKP4-201ENST00000567275 DSCR3O14972 297 aa9.39□□□□□ -0.91
NIFKP4-201ENST00000567275 MMP10P09238 476 aa9.39□□□□□ -0.91
NIFKP4-201ENST00000567275 NSUN2Q08J23 767 aaKnown RBP eCLIP9.39□□□□□ -0.91
NIFKP4-201ENST00000567275 BFSP2Q13515 415 aa9.39□□□□□ -0.91
NIFKP4-201ENST00000567275 EIF4A2Q14240 407 aaKnown RBP9.39□□□□□ -0.91
NIFKP4-201ENST00000567275 MAPKAPK3Q16644 382 aa9.39□□□□□ -0.91
NIFKP4-201ENST00000567275 PLEKHO1Q53GL0 409 aaPredicted RBP9.39□□□□□ -0.91
NIFKP4-201ENST00000567275 TMEM196Q5HYL7 178 aa9.39□□□□□ -0.91
NIFKP4-201ENST00000567275 TLDC1Q6P9B6 456 aa9.39□□□□□ -0.91
NIFKP4-201ENST00000567275 FAM186BQ8IYM0 893 aa9.39□□□□□ -0.91
NIFKP4-201ENST00000567275 ACRBPQ8NEB7 543 aa9.39□□□□□ -0.91
NIFKP4-201ENST00000567275 OSR1Q8TAX0 266 aaPredicted RBP9.39□□□□□ -0.91
NIFKP4-201ENST00000567275 PRR11Q96HE9 360 aaPredicted RBP9.39□□□□□ -0.91
NIFKP4-201ENST00000567275 HIC2Q96JB3 615 aa9.39□□□□□ -0.91
NIFKP4-201ENST00000567275 FNIP2Q9P278 1114 aa9.39□□□□□ -0.91
NIFKP4-201ENST00000567275 VPS4AQ9UN37 437 aa9.39□□□□□ -0.91
NIFKP4-201ENST00000567275 PXDNLA1KZ92 1463 aa9.39□□□□□ -0.91
NIFKP4-201ENST00000567275 C10orf71Q711Q0 1435 aa9.39□□□□□ -0.91
NIFKP4-201ENST00000567275 SMIM35A0A1B0GVV1 85 aa9.38□□□□□ -0.91
NIFKP4-201ENST00000567275 HNRNPDLO14979 420 aaKnown RBP9.38□□□□□ -0.91
NIFKP4-201ENST00000567275 IFIT2P09913 472 aaKnown RBP9.38□□□□□ -0.91
NIFKP4-201ENST00000567275 SRGAP2BP0DMP2 458 aa9.38□□□□□ -0.91
NIFKP4-201ENST00000567275 ATF7P17544 494 aaPredicted RBP9.38□□□□□ -0.91
NIFKP4-201ENST00000567275 GALNSP34059 522 aa9.38□□□□□ -0.91
NIFKP4-201ENST00000567275 KCNJ12Q14500 433 aa9.38□□□□□ -0.91
NIFKP4-201ENST00000567275 MPEG1Q2M385 716 aa9.38□□□□□ -0.91
NIFKP4-201ENST00000567275 P3H1Q32P28 736 aa9.38□□□□□ -0.91
NIFKP4-201ENST00000567275 PNISRQ8TF01 805 aaKnown RBP9.38□□□□□ -0.91
NIFKP4-201ENST00000567275 KIAA1191Q96A73 305 aa9.38□□□□□ -0.91
NIFKP4-201ENST00000567275 SGCZQ96LD1 299 aa9.38□□□□□ -0.91
NIFKP4-201ENST00000567275 EIF3CQ99613 913 aaKnown RBP9.38□□□□□ -0.91
NIFKP4-201ENST00000567275 ELAC2Q9BQ52 826 aaKnown RBP9.38□□□□□ -0.91
NIFKP4-201ENST00000567275 KIF13BQ9NQT8 1826 aa9.38□□□□□ -0.91
NIFKP4-201ENST00000567275 KCNU1A8MYU2 1149 aa9.37□□□□□ -0.91
NIFKP4-201ENST00000567275 CBFA2T3O75081 653 aa9.37□□□□□ -0.91
NIFKP4-201ENST00000567275 GSTM5P46439 218 aa9.37□□□□□ -0.91
NIFKP4-201ENST00000567275 HSPA7P48741 367 aa9.37□□□□□ -0.91
NIFKP4-201ENST00000567275 JAK3P52333 1124 aa9.37□□□□□ -0.91
NIFKP4-201ENST00000567275 BTKQ06187 659 aa9.37□□□□□ -0.91
NIFKP4-201ENST00000567275 SLC14A1Q13336 389 aa9.37□□□□□ -0.91
NIFKP4-201ENST00000567275 TTC30AQ86WT1 665 aa9.37□□□□□ -0.91
NIFKP4-201ENST00000567275 DEPTORQ8TB45 409 aa9.37□□□□□ -0.91
NIFKP4-201ENST00000567275 KAZALD1Q96I82 304 aa9.37□□□□□ -0.91
NIFKP4-201ENST00000567275 NLRC4Q9NPP4 1024 aa9.37□□□□□ -0.91
NIFKP4-201ENST00000567275 TM7SF3Q9NS93 570 aa9.37□□□□□ -0.91
NIFKP4-201ENST00000567275 SCAF8Q9UPN6 1271 aaKnown RBP9.37□□□□□ -0.91
NIFKP4-201ENST00000567275 PCDHB2Q9Y5E7 798 aa9.37□□□□□ -0.91
NIFKP4-201ENST00000567275 OR2W5A6NFC9 320 aa9.36□□□□□ -0.91
NIFKP4-201ENST00000567275 TOMM70O94826 608 aa9.36□□□□□ -0.91
NIFKP4-201ENST00000567275 GYS1P13807 737 aa9.36□□□□□ -0.91
NIFKP4-201ENST00000567275 ABCB4P21439 1286 aa9.36□□□□□ -0.91
NIFKP4-201ENST00000567275 RFC4P35249 363 aa9.36□□□□□ -0.91
NIFKP4-201ENST00000567275 SEMA3BQ13214 749 aa9.36□□□□□ -0.91
NIFKP4-201ENST00000567275 PFKFB3Q16875 520 aaPredicted RBP9.36□□□□□ -0.91
NIFKP4-201ENST00000567275 TMTC4Q5T4D3 741 aa9.36□□□□□ -0.91
NIFKP4-201ENST00000567275 MORN5Q5VZ52 161 aa9.36□□□□□ -0.91
NIFKP4-201ENST00000567275 SLC2A7Q6PXP3 512 aa9.36□□□□□ -0.91
NIFKP4-201ENST00000567275 ZNF398Q8TD17 642 aa9.36□□□□□ -0.91
NIFKP4-201ENST00000567275 RAE1P78406 368 aaKnown RBP9.35□□□□□ -0.91
NIFKP4-201ENST00000567275 DAZAP2Q15038 168 aaPredicted RBP9.35□□□□□ -0.91
NIFKP4-201ENST00000567275 C1orf141Q5JVX7 400 aa9.35□□□□□ -0.91
NIFKP4-201ENST00000567275 RASGRP3Q8IV61 690 aa9.35□□□□□ -0.91
NIFKP4-201ENST00000567275 GJA10Q969M2 543 aa9.35□□□□□ -0.91
NIFKP4-201ENST00000567275 PRSS22Q9GZN4 317 aa9.35□□□□□ -0.91
NIFKP4-201ENST00000567275 NECTIN3Q9NQS3 549 aa9.35□□□□□ -0.91
NIFKP4-201ENST00000567275 KDM6AO15550 1401 aaPredicted RBP9.34□□□□□ -0.91
NIFKP4-201ENST00000567275 CYP2D7A0A087X1C5 515 aa9.34□□□□□ -0.91
NIFKP4-201ENST00000567275 MMP8P22894 467 aa9.34□□□□□ -0.91
NIFKP4-201ENST00000567275 IGHMBP2P38935 993 aaKnown RBP9.34□□□□□ -0.91
NIFKP4-201ENST00000567275 ZNF81P51508 661 aa9.34□□□□□ -0.91
NIFKP4-201ENST00000567275 WDR5P61964 334 aaKnown RBP9.34□□□□□ -0.91
NIFKP4-201ENST00000567275 SSBP2P81877 361 aaPredicted RBP9.34□□□□□ -0.91
NIFKP4-201ENST00000567275 RAB30Q15771 203 aa9.34□□□□□ -0.91
NIFKP4-201ENST00000567275 ARL6IP4Q66PJ3 421 aaKnown RBP9.34□□□□□ -0.91
NIFKP4-201ENST00000567275 ZNF530Q6P9A1 599 aaPredicted RBP9.34□□□□□ -0.91
NIFKP4-201ENST00000567275 CLASRPQ8N2M8 674 aaKnown RBP9.34□□□□□ -0.91
NIFKP4-201ENST00000567275 OVCA2Q8WZ82 227 aa9.34□□□□□ -0.91
NIFKP4-201ENST00000567275 NUDT22Q9BRQ3 303 aa9.34□□□□□ -0.91
NIFKP4-201ENST00000567275 ARL8BQ9NVJ2 186 aa9.34□□□□□ -0.91
NIFKP4-201ENST00000567275 ZNF70Q9UC06 446 aaPredicted RBP9.34□□□□□ -0.91
NIFKP4-201ENST00000567275 SLC39A10Q9ULF5 831 aa9.34□□□□□ -0.91
NIFKP4-201ENST00000567275 COL3A1P02461 1466 aaPredicted RBP9.34□□□□□ -0.91
NIFKP4-201ENST00000567275 C4AP0C0L4 1744 aa9.34□□□□□ -0.92
NIFKP4-201ENST00000567275 COL5A3P25940 1745 aaPredicted RBP9.34□□□□□ -0.92
NIFKP4-201ENST00000567275 MBPP02686 304 aaPredicted RBP9.33□□□□□ -0.92
NIFKP4-201ENST00000567275 SLC3A2P08195 630 aaKnown RBP9.33□□□□□ -0.92
NIFKP4-201ENST00000567275 LMO1P25800 156 aa9.33□□□□□ -0.92
NIFKP4-201ENST00000567275 CRKLP46109 303 aaKnown RBP9.33□□□□□ -0.92
NIFKP4-201ENST00000567275 GHRHRQ02643 423 aa9.33□□□□□ -0.92
NIFKP4-201ENST00000567275 KPNB1Q14974 876 aaKnown RBP9.33□□□□□ -0.92
NIFKP4-201ENST00000567275 DGKKQ5KSL6 1271 aa9.33□□□□□ -0.92
NIFKP4-201ENST00000567275 FAM90A2PQ658T7 463 aa9.33□□□□□ -0.92
NIFKP4-201ENST00000567275 CCDC144NLQ6NUI1 221 aa9.33□□□□□ -0.92
NIFKP4-201ENST00000567275 SMIM5Q71RC9 77 aa9.33□□□□□ -0.92
NIFKP4-201ENST00000567275 MAP4K1Q92918 833 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms