RNA–Protein interactions for RNA: ENST00000567003.1

PALB2-205, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-205ENST00000567003 RNASEH1O60930 286 aaKnown RBP16.05■□□□□ 0.16
PALB2-205ENST00000567003 MOCS2O96007 188 aaPredicted RBP16.05■□□□□ 0.16
PALB2-205ENST00000567003 SETSIPP0DME0 302 aa16.05■□□□□ 0.16
PALB2-205ENST00000567003 STK19P49842 368 aaPredicted RBP16.05■□□□□ 0.16
PALB2-205ENST00000567003 METAP1P53582 386 aa16.05■□□□□ 0.16
PALB2-205ENST00000567003 ADPRHP54922 357 aa16.05■□□□□ 0.16
PALB2-205ENST00000567003 MCCD1P59942 119 aaPredicted RBP16.05■□□□□ 0.16
PALB2-205ENST00000567003 C19orf57Q0VDD7 668 aa16.05■□□□□ 0.16
PALB2-205ENST00000567003 MPP7Q5T2T1 576 aa16.05■□□□□ 0.16
PALB2-205ENST00000567003 NUGGCQ68CJ6 796 aa16.05■□□□□ 0.16
PALB2-205ENST00000567003 ATL3Q6DD88 541 aa16.05■□□□□ 0.16
PALB2-205ENST00000567003 FBXL19Q6PCT2 694 aa16.05■□□□□ 0.16
PALB2-205ENST00000567003 OR14C36Q8NHC7 312 aa16.05■□□□□ 0.16
PALB2-205ENST00000567003 SERAC1Q96JX3 654 aa16.05■□□□□ 0.16
PALB2-205ENST00000567003 FCRL2Q96LA5 508 aaPredicted RBP16.05■□□□□ 0.16
PALB2-205ENST00000567003 FCRL3Q96P31 734 aaPredicted RBP16.05■□□□□ 0.16
PALB2-205ENST00000567003 FAM129BQ96TA1 746 aa16.05■□□□□ 0.16
PALB2-205ENST00000567003 GDF3Q9NR23 364 aa16.05■□□□□ 0.16
PALB2-205ENST00000567003 XPO7Q9UIA9 1087 aaKnown RBP16.05■□□□□ 0.16
PALB2-205ENST00000567003 SLCO3A1Q9UIG8 710 aa16.05■□□□□ 0.16
PALB2-205ENST00000567003 SCML1Q9UN30 329 aa16.05■□□□□ 0.16
PALB2-205ENST00000567003 C10orf142B7Z368 130 aa16.04■□□□□ 0.16
PALB2-205ENST00000567003 M0QYV0 167 aa16.04■□□□□ 0.16
PALB2-205ENST00000567003 IRAK2O43187 625 aa16.04■□□□□ 0.16
PALB2-205ENST00000567003 LTFP02788 710 aa16.04■□□□□ 0.16
PALB2-205ENST00000567003 ASLP04424 464 aa16.04■□□□□ 0.16
PALB2-205ENST00000567003 VDRP11473 427 aa16.04■□□□□ 0.16
PALB2-205ENST00000567003 VAV1P15498 845 aa16.04■□□□□ 0.16
PALB2-205ENST00000567003 NXPH1P58417 271 aa16.04■□□□□ 0.16
PALB2-205ENST00000567003 CDH18Q13634 790 aa16.04■□□□□ 0.16
PALB2-205ENST00000567003 DCAF6Q58WW2 860 aa16.04■□□□□ 0.16
PALB2-205ENST00000567003 LRRC69Q6ZNQ3 347 aa16.04■□□□□ 0.16
PALB2-205ENST00000567003 SPATS2Q86XZ4 545 aaKnown RBP16.04■□□□□ 0.16
PALB2-205ENST00000567003 UNC45BQ8IWX7 931 aa16.04■□□□□ 0.16
PALB2-205ENST00000567003 APCDD1Q8J025 514 aa16.04■□□□□ 0.16
PALB2-205ENST00000567003 TSC1Q92574 1164 aa16.04■□□□□ 0.16
PALB2-205ENST00000567003 RPL10LQ96L21 214 aaKnown RBP16.04■□□□□ 0.16
PALB2-205ENST00000567003 MIS12Q9H081 205 aa16.04■□□□□ 0.16
PALB2-205ENST00000567003 GOLPH3LQ9H4A5 285 aa16.04■□□□□ 0.16
PALB2-205ENST00000567003 CAAP1Q9H8G2 361 aa16.04■□□□□ 0.16
PALB2-205ENST00000567003 ADAMTS1Q9UHI8 967 aa16.04■□□□□ 0.16
PALB2-205ENST00000567003 CEP83Q9Y592 693 aa16.04■□□□□ 0.16
PALB2-205ENST00000567003 EDDM13A0A1B0GTR0 161 aa16.03■□□□□ 0.16
PALB2-205ENST00000567003 TLR4O00206 839 aa16.03■□□□□ 0.16
PALB2-205ENST00000567003 CETN3O15182 167 aa16.03■□□□□ 0.16
PALB2-205ENST00000567003 ATXN7O15265 892 aaPredicted RBP16.03■□□□□ 0.16
PALB2-205ENST00000567003 BRINP1O60477 761 aa16.03■□□□□ 0.16
PALB2-205ENST00000567003 STX10O60499 249 aa16.03■□□□□ 0.16
PALB2-205ENST00000567003 SDC3O75056 442 aa16.03■□□□□ 0.16
PALB2-205ENST00000567003 FYNP06241 537 aa16.03■□□□□ 0.16
PALB2-205ENST00000567003 HSP90AA1P07900 732 aaKnown RBP16.03■□□□□ 0.16
PALB2-205ENST00000567003 BRD2P25440 801 aaKnown RBP16.03■□□□□ 0.16
PALB2-205ENST00000567003 CCR5P51681 352 aa16.03■□□□□ 0.16
PALB2-205ENST00000567003 EDRF1Q3B7T1 1238 aa16.03■□□□□ 0.16
PALB2-205ENST00000567003 MS4A13Q5J8X5 152 aa16.03■□□□□ 0.16
PALB2-205ENST00000567003 TMEM270Q6UE05 265 aa16.03■□□□□ 0.16
PALB2-205ENST00000567003 LCLAT1Q6UWP7 414 aa16.03■□□□□ 0.16
PALB2-205ENST00000567003 KRBA2Q6ZNG9 492 aa16.03■□□□□ 0.16
PALB2-205ENST00000567003 KANSL1Q7Z3B3 1105 aa16.03■□□□□ 0.16
PALB2-205ENST00000567003 SCML4Q8N228 414 aa16.03■□□□□ 0.16
PALB2-205ENST00000567003 DQX1Q8TE96 717 aaKnown RBP16.03■□□□□ 0.16
PALB2-205ENST00000567003 SLC35F5Q8WV83 523 aa16.03■□□□□ 0.16
PALB2-205ENST00000567003 KAT5Q92993 513 aa16.03■□□□□ 0.16
PALB2-205ENST00000567003 SKA1Q96BD8 255 aa16.03■□□□□ 0.16
PALB2-205ENST00000567003 SPATA32Q96LK8 384 aa16.03■□□□□ 0.16
PALB2-205ENST00000567003 FZD4Q9ULV1 537 aa16.03■□□□□ 0.16
PALB2-205ENST00000567003 CA5BQ9Y2D0 317 aa16.03■□□□□ 0.16
PALB2-205ENST00000567003 ITIH6Q6UXX5 1313 aa16.02■□□□□ 0.16
PALB2-205ENST00000567003 RNF225M0QZC1 329 aaPredicted RBP16.02■□□□□ 0.16
PALB2-205ENST00000567003 LUC7L3O95232 432 aaKnown RBP16.02■□□□□ 0.16
PALB2-205ENST00000567003 IL1BP01584 269 aa16.02■□□□□ 0.16
PALB2-205ENST00000567003 C1SP09871 688 aa16.02■□□□□ 0.16
PALB2-205ENST00000567003 GOT1P17174 413 aa16.02■□□□□ 0.16
PALB2-205ENST00000567003 MZF1P28698 734 aaPredicted RBP16.02■□□□□ 0.16
PALB2-205ENST00000567003 MAT2AP31153 395 aaKnown RBP16.02■□□□□ 0.16
PALB2-205ENST00000567003 CCDC173Q0VFZ6 552 aa16.02■□□□□ 0.16
PALB2-205ENST00000567003 SFMBT2Q5VUG0 894 aa16.02■□□□□ 0.16
PALB2-205ENST00000567003 RAP1GAP2Q684P5 730 aa16.02■□□□□ 0.16
PALB2-205ENST00000567003 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.02■□□□□ 0.16
PALB2-205ENST00000567003 SND1Q7KZF4 910 aaKnown RBP eCLIP16.02■□□□□ 0.16
PALB2-205ENST00000567003 CIR1Q86X95 450 aaPredicted RBP16.02■□□□□ 0.16
PALB2-205ENST00000567003 LGI2Q8N0V4 545 aa16.02■□□□□ 0.16
PALB2-205ENST00000567003 IRGQQ8WZA9 623 aa16.02■□□□□ 0.16
PALB2-205ENST00000567003 SNX21Q969T3 373 aa16.02■□□□□ 0.16
PALB2-205ENST00000567003 NAALADL1Q9UQQ1 740 aa16.02■□□□□ 0.16
PALB2-205ENST00000567003 COQ4Q9Y3A0 265 aa16.02■□□□□ 0.16
PALB2-205ENST00000567003 PCDHB4Q9Y5E5 795 aa16.02■□□□□ 0.16
PALB2-205ENST00000567003 TBC1D3DA0A087WVF3 549 aa16.01■□□□□ 0.15
PALB2-205ENST00000567003 TBC1D3IA0A087WXS9 549 aa16.01■□□□□ 0.15
PALB2-205ENST00000567003 TBC1D3EA0A087X179 549 aa16.01■□□□□ 0.15
PALB2-205ENST00000567003 TBC1D3KA0A087X1G2 549 aa16.01■□□□□ 0.15
PALB2-205ENST00000567003 FAM237AA0A1B0GTK4 181 aa16.01■□□□□ 0.15
PALB2-205ENST00000567003 TARSL2A2RTX5 802 aaKnown RBP16.01■□□□□ 0.15
PALB2-205ENST00000567003 TYW5A2RUC4 315 aaKnown RBP16.01■□□□□ 0.15
PALB2-205ENST00000567003 TBC1D3FA6NER0 549 aaPredicted RBP16.01■□□□□ 0.15
PALB2-205ENST00000567003 TBC1D3LB9A6J9 549 aa16.01■□□□□ 0.15
PALB2-205ENST00000567003 YKT6O15498 198 aa16.01■□□□□ 0.15
PALB2-205ENST00000567003 RRP8O43159 456 aaKnown RBP16.01■□□□□ 0.15
PALB2-205ENST00000567003 RTN2O75298 545 aa16.01■□□□□ 0.15
PALB2-205ENST00000567003 SRPRAP08240 638 aaKnown RBP16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms