RNA–Protein interactions for RNA: ENST00000566828.5

EDC3-212, Transcript of enhancer of mRNA decapping 3, humanhuman

TSL 4

Gene EDC3, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-212ENST00000566828 TBC1D25Q3MII6 688 aa16.74■□□□□ 0.27
EDC3-212ENST00000566828 SLC45A4Q5BKX6 768 aa16.74■□□□□ 0.27
EDC3-212ENST00000566828 FSCBQ5H9T9 825 aa16.74■□□□□ 0.27
EDC3-212ENST00000566828 PITRM1Q5JRX3 1037 aa16.74■□□□□ 0.27
EDC3-212ENST00000566828 KDM7AQ6ZMT4 941 aa16.74■□□□□ 0.27
EDC3-212ENST00000566828 SND1Q7KZF4 910 aaKnown RBP eCLIP16.74■□□□□ 0.27
EDC3-212ENST00000566828 SPATS2Q86XZ4 545 aaKnown RBP16.74■□□□□ 0.27
EDC3-212ENST00000566828 STK40Q8N2I9 435 aa16.74■□□□□ 0.27
EDC3-212ENST00000566828 FIBINQ8TAL6 211 aa16.74■□□□□ 0.27
EDC3-212ENST00000566828 CLEC4CQ8WTT0 213 aa16.74■□□□□ 0.27
EDC3-212ENST00000566828 FAXDC2Q96IV6 333 aa16.74■□□□□ 0.27
EDC3-212ENST00000566828 NUCKS1Q9H1E3 243 aaKnown RBP16.74■□□□□ 0.27
EDC3-212ENST00000566828 CNGB3Q9NQW8 809 aa16.74■□□□□ 0.27
EDC3-212ENST00000566828 CEP83Q9Y592 693 aa16.74■□□□□ 0.27
EDC3-212ENST00000566828 ZNF462Q96JM2 2506 aa16.74■□□□□ 0.27
EDC3-212ENST00000566828 ITIH6Q6UXX5 1313 aa16.73■□□□□ 0.27
EDC3-212ENST00000566828 ATMQ13315 3056 aa16.73■□□□□ 0.27
EDC3-212ENST00000566828 EDDM13A0A1B0GTR0 161 aa16.73■□□□□ 0.27
EDC3-212ENST00000566828 A0A1B0GVL5 298 aa16.73■□□□□ 0.27
EDC3-212ENST00000566828 O00370 1275 aa16.73■□□□□ 0.27
EDC3-212ENST00000566828 SETSIPP0DME0 302 aa16.73■□□□□ 0.27
EDC3-212ENST00000566828 CKMT2P17540 419 aa16.73■□□□□ 0.27
EDC3-212ENST00000566828 RPL13P26373 211 aaKnown RBP16.73■□□□□ 0.27
EDC3-212ENST00000566828 ACTN2P35609 894 aa16.73■□□□□ 0.27
EDC3-212ENST00000566828 METAP1P53582 386 aa16.73■□□□□ 0.27
EDC3-212ENST00000566828 TBX4P57082 545 aa16.73■□□□□ 0.27
EDC3-212ENST00000566828 CFHR1Q03591 330 aa16.73■□□□□ 0.27
EDC3-212ENST00000566828 ILKQ13418 452 aa16.73■□□□□ 0.27
EDC3-212ENST00000566828 ADAM9Q13443 819 aa16.73■□□□□ 0.27
EDC3-212ENST00000566828 NAPEPLDQ6IQ20 393 aa16.73■□□□□ 0.27
EDC3-212ENST00000566828 UNC45BQ8IWX7 931 aa16.73■□□□□ 0.27
EDC3-212ENST00000566828 CFAP52Q8N1V2 620 aa16.73■□□□□ 0.27
EDC3-212ENST00000566828 OXR1Q8N573 874 aa16.73■□□□□ 0.27
EDC3-212ENST00000566828 KCTD13Q8WZ19 329 aa16.73■□□□□ 0.27
EDC3-212ENST00000566828 NAF1Q96HR8 494 aaKnown RBP16.73■□□□□ 0.27
EDC3-212ENST00000566828 LGMNQ99538 433 aa16.73■□□□□ 0.27
EDC3-212ENST00000566828 GABBR2O75899 941 aa16.72■□□□□ 0.27
EDC3-212ENST00000566828 RHOBTB3O94955 611 aa16.72■□□□□ 0.27
EDC3-212ENST00000566828 ADH1BP00325 375 aa16.72■□□□□ 0.27
EDC3-212ENST00000566828 IL1BP01584 269 aa16.72■□□□□ 0.27
EDC3-212ENST00000566828 LTFP02788 710 aa16.72■□□□□ 0.27
EDC3-212ENST00000566828 ZSCAN22P10073 491 aaPredicted RBP16.72■□□□□ 0.27
EDC3-212ENST00000566828 GOT1P17174 413 aa16.72■□□□□ 0.27
EDC3-212ENST00000566828 MZF1P28698 734 aaPredicted RBP16.72■□□□□ 0.27
EDC3-212ENST00000566828 MAT2AP31153 395 aaKnown RBP16.72■□□□□ 0.27
EDC3-212ENST00000566828 RXRGP48443 463 aa16.72■□□□□ 0.27
EDC3-212ENST00000566828 STK19P49842 368 aaPredicted RBP16.72■□□□□ 0.27
EDC3-212ENST00000566828 CUL2Q13617 745 aa16.72■□□□□ 0.27
EDC3-212ENST00000566828 ARID5BQ14865 1188 aa16.72■□□□□ 0.27
EDC3-212ENST00000566828 CBWD6Q4V339 395 aa16.72■□□□□ 0.27
EDC3-212ENST00000566828 ZCWPW2Q504Y3 356 aa16.72■□□□□ 0.27
EDC3-212ENST00000566828 DCAF17Q5H9S7 520 aaPredicted RBP16.72■□□□□ 0.27
EDC3-212ENST00000566828 CBWD3Q5JTY5 395 aa16.72■□□□□ 0.27
EDC3-212ENST00000566828 CBWD5Q5RIA9 395 aa16.72■□□□□ 0.27
EDC3-212ENST00000566828 SCML4Q8N228 414 aa16.72■□□□□ 0.27
EDC3-212ENST00000566828 DCBLD1Q8N8Z6 715 aa16.72■□□□□ 0.27
EDC3-212ENST00000566828 RFFLQ8WZ73 363 aa16.72■□□□□ 0.27
EDC3-212ENST00000566828 RPL10LQ96L21 214 aaKnown RBP16.72■□□□□ 0.27
EDC3-212ENST00000566828 FCRL2Q96LA5 508 aaPredicted RBP16.72■□□□□ 0.27
EDC3-212ENST00000566828 FAM129BQ96TA1 746 aa16.72■□□□□ 0.27
EDC3-212ENST00000566828 IRX2Q9BZI1 471 aaPredicted RBP16.72■□□□□ 0.27
EDC3-212ENST00000566828 ERVMER34-1Q9H9K5 563 aa16.72■□□□□ 0.27
EDC3-212ENST00000566828 SLCO3A1Q9UIG8 710 aa16.72■□□□□ 0.27
EDC3-212ENST00000566828 PCDHB1Q9Y5F3 818 aa16.72■□□□□ 0.27
EDC3-212ENST00000566828 TDRD6O60522 2096 aaKnown RBP16.72■□□□□ 0.27
EDC3-212ENST00000566828 MGAQ8IWI9 3026 aa16.72■□□□□ 0.27
EDC3-212ENST00000566828 TBC1D3DA0A087WVF3 549 aa16.71■□□□□ 0.27
EDC3-212ENST00000566828 TBC1D3IA0A087WXS9 549 aa16.71■□□□□ 0.27
EDC3-212ENST00000566828 TBC1D3EA0A087X179 549 aa16.71■□□□□ 0.27
EDC3-212ENST00000566828 TBC1D3KA0A087X1G2 549 aa16.71■□□□□ 0.27
EDC3-212ENST00000566828 TARSL2A2RTX5 802 aaKnown RBP16.71■□□□□ 0.27
EDC3-212ENST00000566828 TBC1D3FA6NER0 549 aaPredicted RBP16.71■□□□□ 0.27
EDC3-212ENST00000566828 TBC1D3LB9A6J9 549 aa16.71■□□□□ 0.27
EDC3-212ENST00000566828 LATO43561 262 aa16.71■□□□□ 0.27
EDC3-212ENST00000566828 LUC7L3O95232 432 aaKnown RBP16.71■□□□□ 0.27
EDC3-212ENST00000566828 MOCS2O96007 188 aaPredicted RBP16.71■□□□□ 0.27
EDC3-212ENST00000566828 MYL1P05976 194 aa16.71■□□□□ 0.27
EDC3-212ENST00000566828 SRPRAP08240 638 aaKnown RBP16.71■□□□□ 0.27
EDC3-212ENST00000566828 TBC1D3HP0C7X1 549 aa16.71■□□□□ 0.27
EDC3-212ENST00000566828 VAV1P15498 845 aa16.71■□□□□ 0.27
EDC3-212ENST00000566828 C5AR1P21730 350 aa16.71■□□□□ 0.27
EDC3-212ENST00000566828 ACP1P24666 158 aa16.71■□□□□ 0.27
EDC3-212ENST00000566828 DRD3P35462 400 aa16.71■□□□□ 0.27
EDC3-212ENST00000566828 DNM1Q05193 864 aaKnown RBP16.71■□□□□ 0.27
EDC3-212ENST00000566828 PROX2Q3B8N5 592 aa16.71■□□□□ 0.27
EDC3-212ENST00000566828 PKDCCQ504Y2 493 aa16.71■□□□□ 0.27
EDC3-212ENST00000566828 TAF1BQ53T94 588 aaPredicted RBP16.71■□□□□ 0.27
EDC3-212ENST00000566828 TCERG1LQ5VWI1 586 aa16.71■□□□□ 0.27
EDC3-212ENST00000566828 RNF219Q5W0B1 726 aaPredicted RBP16.71■□□□□ 0.27
EDC3-212ENST00000566828 TBC1D3GQ6DHY5 549 aa16.71■□□□□ 0.27
EDC3-212ENST00000566828 TBC1D3CQ6IPX1 549 aa16.71■□□□□ 0.27
EDC3-212ENST00000566828 CCDC117Q8IWD4 279 aaPredicted RBP16.71■□□□□ 0.27
EDC3-212ENST00000566828 TBC1D3Q8IZP1 549 aaPredicted RBP16.71■□□□□ 0.27
EDC3-212ENST00000566828 GUF1Q8N442 669 aaKnown RBP16.71■□□□□ 0.27
EDC3-212ENST00000566828 KDM1BQ8NB78 822 aa16.71■□□□□ 0.27
EDC3-212ENST00000566828 PTPRN2Q92932 1015 aa16.71■□□□□ 0.27
EDC3-212ENST00000566828 CCDC47Q96A33 483 aaKnown RBP16.71■□□□□ 0.27
EDC3-212ENST00000566828 COL27A1Q8IZC6 1860 aaPredicted RBP16.71■□□□□ 0.27
EDC3-212ENST00000566828 J3QKU1 62 aa16.7■□□□□ 0.26
EDC3-212ENST00000566828 M0QYV0 167 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms