RNA–Protein interactions for RNA: ENST00000566104.1

TRADD-204, Transcript of TNFRSF1A associated via death domain, humanhuman

TSL 2

Gene TRADD, Length 669 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRADD-204ENST00000566104 N4BP2L1Q5TBK1 243 aaPredicted RBP20.58■□□□□ 0.89
TRADD-204ENST00000566104 SH3PXD2AQ5TCZ1 1133 aa20.58■□□□□ 0.89
TRADD-204ENST00000566104 DCAF12L1Q5VU92 463 aa20.58■□□□□ 0.89
TRADD-204ENST00000566104 SND1Q7KZF4 910 aaKnown RBP eCLIP20.58■□□□□ 0.89
TRADD-204ENST00000566104 FAM124AQ86V42 546 aa20.58■□□□□ 0.89
TRADD-204ENST00000566104 ERICH1Q86X53 443 aa20.58■□□□□ 0.89
TRADD-204ENST00000566104 ZNF677Q86XU0 584 aa20.58■□□□□ 0.89
TRADD-204ENST00000566104 CCAR2Q8N163 923 aaKnown RBP20.58■□□□□ 0.89
TRADD-204ENST00000566104 EPS8L1Q8TE68 723 aa20.58■□□□□ 0.89
TRADD-204ENST00000566104 MYO19Q96H55 970 aa20.58■□□□□ 0.89
TRADD-204ENST00000566104 RPRD1AQ96P16 312 aaPredicted RBP20.58■□□□□ 0.89
TRADD-204ENST00000566104 ZDHHC5Q9C0B5 715 aa20.58■□□□□ 0.89
TRADD-204ENST00000566104 BTBD1Q9H0C5 482 aa20.58■□□□□ 0.89
TRADD-204ENST00000566104 VPS16Q9H269 839 aa20.58■□□□□ 0.89
TRADD-204ENST00000566104 SLC32A1Q9H598 525 aa20.58■□□□□ 0.89
TRADD-204ENST00000566104 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP20.58■□□□□ 0.89
TRADD-204ENST00000566104 ERVW-1Q9UQF0 538 aa20.58■□□□□ 0.89
TRADD-204ENST00000566104 ITIH6Q6UXX5 1313 aa20.57■□□□□ 0.88
TRADD-204ENST00000566104 OPHN1O60890 802 aa20.57■□□□□ 0.88
TRADD-204ENST00000566104 F9P00740 461 aa20.57■□□□□ 0.88
TRADD-204ENST00000566104 RPS14P62263 151 aaKnown RBP20.57■□□□□ 0.88
TRADD-204ENST00000566104 MYL5Q02045 173 aa20.57■□□□□ 0.88
TRADD-204ENST00000566104 SULT2A1Q06520 285 aa20.57■□□□□ 0.88
TRADD-204ENST00000566104 FAM102AQ5T9C2 384 aaPredicted RBP20.57■□□□□ 0.88
TRADD-204ENST00000566104 TAF3Q5VWG9 929 aa20.57■□□□□ 0.88
TRADD-204ENST00000566104 MMS22LQ6ZRQ5 1243 aa20.57■□□□□ 0.88
TRADD-204ENST00000566104 MINDY1Q8N5J2 469 aa20.57■□□□□ 0.88
TRADD-204ENST00000566104 MRGPRX3Q96LB0 322 aa20.57■□□□□ 0.88
TRADD-204ENST00000566104 NPY6RQ99463 290 aa20.57■□□□□ 0.88
TRADD-204ENST00000566104 RSPH9Q9H1X1 276 aaPredicted RBP20.57■□□□□ 0.88
TRADD-204ENST00000566104 GANQ9H2C0 597 aa20.57■□□□□ 0.88
TRADD-204ENST00000566104 NCKAP1Q9Y2A7 1128 aa20.57■□□□□ 0.88
TRADD-204ENST00000566104 DOCK4Q8N1I0 1966 aa20.56■□□□□ 0.88
TRADD-204ENST00000566104 EDDM13A0A1B0GTR0 161 aa20.56■□□□□ 0.88
TRADD-204ENST00000566104 TARSL2A2RTX5 802 aaKnown RBP20.56■□□□□ 0.88
TRADD-204ENST00000566104 UPK3BL1B0FP48 263 aa20.56■□□□□ 0.88
TRADD-204ENST00000566104 UPK3BL2E5RIL1 263 aa20.56■□□□□ 0.88
TRADD-204ENST00000566104 MAOBP27338 520 aa20.56■□□□□ 0.88
TRADD-204ENST00000566104 SULT1E1P49888 294 aa20.56■□□□□ 0.88
TRADD-204ENST00000566104 ACBD5Q5T8D3 534 aaPredicted RBP20.56■□□□□ 0.88
TRADD-204ENST00000566104 FBXL22Q6P050 247 aa20.56■□□□□ 0.88
TRADD-204ENST00000566104 USP30Q70CQ3 517 aa20.56■□□□□ 0.88
TRADD-204ENST00000566104 NOP9Q86U38 636 aaKnown RBP20.56■□□□□ 0.88
TRADD-204ENST00000566104 PGAP3Q96FM1 320 aaPredicted RBP20.56■□□□□ 0.88
TRADD-204ENST00000566104 SPAG5Q96R06 1193 aa20.56■□□□□ 0.88
TRADD-204ENST00000566104 MIR1-1HGQ9H1L0 117 aa20.56■□□□□ 0.88
TRADD-204ENST00000566104 WDCPQ9H6R7 721 aa20.56■□□□□ 0.88
TRADD-204ENST00000566104 SGK2Q9HBY8 427 aa20.56■□□□□ 0.88
TRADD-204ENST00000566104 FSCN3Q9NQT6 498 aa20.56■□□□□ 0.88
TRADD-204ENST00000566104 ANGPTL2Q9UKU9 493 aa20.56■□□□□ 0.88
TRADD-204ENST00000566104 TP53BP1Q12888 1972 aaPredicted RBP20.55■□□□□ 0.88
TRADD-204ENST00000566104 SIN3BO75182 1162 aa20.55■□□□□ 0.88
TRADD-204ENST00000566104 SEMA4FO95754 770 aa20.55■□□□□ 0.88
TRADD-204ENST00000566104 PMLP29590 882 aa20.55■□□□□ 0.88
TRADD-204ENST00000566104 RNASE9P60153 205 aaKnown RBP20.55■□□□□ 0.88
TRADD-204ENST00000566104 NOMO3P69849 1222 aa20.55■□□□□ 0.88
TRADD-204ENST00000566104 ZNF252P-AS1Q0IIN9 211 aa20.55■□□□□ 0.88
TRADD-204ENST00000566104 AUHQ13825 339 aaKnown RBP20.55■□□□□ 0.88
TRADD-204ENST00000566104 CCDC183Q5T5S1 534 aa20.55■□□□□ 0.88
TRADD-204ENST00000566104 LRSAM1Q6UWE0 723 aa20.55■□□□□ 0.88
TRADD-204ENST00000566104 CIR1Q86X95 450 aaPredicted RBP20.55■□□□□ 0.88
TRADD-204ENST00000566104 XYLT1Q86Y38 959 aa20.55■□□□□ 0.88
TRADD-204ENST00000566104 DHX40Q8IX18 779 aaKnown RBP20.55■□□□□ 0.88
TRADD-204ENST00000566104 APCDD1Q8J025 514 aa20.55■□□□□ 0.88
TRADD-204ENST00000566104 ZCCHC9Q8N567 271 aaKnown RBP20.55■□□□□ 0.88
TRADD-204ENST00000566104 SNX19Q92543 992 aa20.55■□□□□ 0.88
TRADD-204ENST00000566104 FAM207AQ9NSI2 230 aaPredicted RBP20.55■□□□□ 0.88
TRADD-204ENST00000566104 PIGVQ9NUD9 493 aa20.55■□□□□ 0.88
TRADD-204ENST00000566104 DNAAF2Q9NVR5 837 aaKnown RBP20.55■□□□□ 0.88
TRADD-204ENST00000566104 FANCLQ9NW38 375 aa20.55■□□□□ 0.88
TRADD-204ENST00000566104 VANGL2Q9ULK5 521 aa20.55■□□□□ 0.88
TRADD-204ENST00000566104 HS3ST4Q9Y661 456 aa20.55■□□□□ 0.88
TRADD-204ENST00000566104 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP20.54■□□□□ 0.88
TRADD-204ENST00000566104 BCAT2O15382 392 aaPredicted RBP20.54■□□□□ 0.88
TRADD-204ENST00000566104 PAGE1O75459 146 aa20.54■□□□□ 0.88
TRADD-204ENST00000566104 CLDN11O75508 207 aa20.54■□□□□ 0.88
TRADD-204ENST00000566104 MMEP08473 750 aa20.54■□□□□ 0.88
TRADD-204ENST00000566104 PDGFRAP16234 1089 aa20.54■□□□□ 0.88
TRADD-204ENST00000566104 ACSL1P33121 698 aa20.54■□□□□ 0.88
TRADD-204ENST00000566104 CTSOP43234 321 aaPredicted RBP20.54■□□□□ 0.88
TRADD-204ENST00000566104 CXCR3P49682 368 aa20.54■□□□□ 0.88
TRADD-204ENST00000566104 PLK1P53350 603 aa20.54■□□□□ 0.88
TRADD-204ENST00000566104 POLR2FP61218 127 aaKnown RBP20.54■□□□□ 0.88
TRADD-204ENST00000566104 CENPCQ03188 943 aa20.54■□□□□ 0.88
TRADD-204ENST00000566104 DEUP1Q05D60 604 aa20.54■□□□□ 0.88
TRADD-204ENST00000566104 SEMA3BQ13214 749 aa20.54■□□□□ 0.88
TRADD-204ENST00000566104 SLC14A1Q13336 389 aa20.54■□□□□ 0.88
TRADD-204ENST00000566104 ZNF177Q13360 481 aaPredicted RBP20.54■□□□□ 0.88
TRADD-204ENST00000566104 SLC25A52Q3SY17 297 aa20.54■□□□□ 0.88
TRADD-204ENST00000566104 CXorf57Q6NSI4 855 aaKnown RBP20.54■□□□□ 0.88
TRADD-204ENST00000566104 NT5C3BQ969T7 300 aa20.54■□□□□ 0.88
TRADD-204ENST00000566104 TKTL2Q9H0I9 626 aa20.54■□□□□ 0.88
TRADD-204ENST00000566104 PABPC3Q9H361 631 aaKnown RBP20.54■□□□□ 0.88
TRADD-204ENST00000566104 ARHGEF38Q9NXL2 777 aa20.54■□□□□ 0.88
TRADD-204ENST00000566104 EIF2B4Q9UI10 523 aaKnown RBP20.54■□□□□ 0.88
TRADD-204ENST00000566104 SLC25A13Q9UJS0 675 aa20.54■□□□□ 0.88
TRADD-204ENST00000566104 PCNX2A6NKB5 2137 aa20.54■□□□□ 0.88
TRADD-204ENST00000566104 GFPT2O94808 682 aa20.53■□□□□ 0.88
TRADD-204ENST00000566104 SOX5P35711 763 aa20.53■□□□□ 0.88
TRADD-204ENST00000566104 COPB1P53618 953 aaKnown RBP20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms