RNA–Protein interactions for RNA: ENST00000565966.5

HERPUD1-210, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5

Gene HERPUD1, Length 798 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-210ENST00000565966 CNOT8Q9UFF9 292 aaKnown RBP14.28□□□□□ -0.12
HERPUD1-210ENST00000565966 PLA2G4CQ9UP65 541 aa14.28□□□□□ -0.12
HERPUD1-210ENST00000565966 HS3ST4Q9Y661 456 aa14.28□□□□□ -0.12
HERPUD1-210ENST00000565966 PI4KAP42356 2102 aa14.27□□□□□ -0.12
HERPUD1-210ENST00000565966 SSU72P8A0A1W2PR75 194 aa14.27□□□□□ -0.13
HERPUD1-210ENST00000565966 CCP110O43303 1012 aa14.27□□□□□ -0.13
HERPUD1-210ENST00000565966 ATP5BP06576 529 aaKnown RBP14.27□□□□□ -0.13
HERPUD1-210ENST00000565966 MYBL1P10243 752 aa14.27□□□□□ -0.13
HERPUD1-210ENST00000565966 POLR2EP19388 210 aaKnown RBP14.27□□□□□ -0.13
HERPUD1-210ENST00000565966 GGCXP38435 758 aa14.27□□□□□ -0.13
HERPUD1-210ENST00000565966 IL12RB1P42701 662 aa14.27□□□□□ -0.13
HERPUD1-210ENST00000565966 ZNF143P52747 638 aaPredicted RBP14.27□□□□□ -0.13
HERPUD1-210ENST00000565966 LMAN2Q12907 356 aa14.27□□□□□ -0.13
HERPUD1-210ENST00000565966 ZNF234Q14588 700 aa14.27□□□□□ -0.13
HERPUD1-210ENST00000565966 LPAL2Q16609 132 aa14.27□□□□□ -0.13
HERPUD1-210ENST00000565966 CDO1Q16878 200 aa14.27□□□□□ -0.13
HERPUD1-210ENST00000565966 ASTE1Q2TB18 679 aaPredicted RBP14.27□□□□□ -0.13
HERPUD1-210ENST00000565966 MBLAC2Q68D91 279 aa14.27□□□□□ -0.13
HERPUD1-210ENST00000565966 ALKBH5Q6P6C2 394 aaKnown RBP14.27□□□□□ -0.13
HERPUD1-210ENST00000565966 DCUN1D2Q6PH85 259 aa14.27□□□□□ -0.13
HERPUD1-210ENST00000565966 FAM131BQ86XD5 332 aa14.27□□□□□ -0.13
HERPUD1-210ENST00000565966 TC2NQ8N9U0 490 aa14.27□□□□□ -0.13
HERPUD1-210ENST00000565966 FAM172AQ8WUF8 416 aa14.27□□□□□ -0.13
HERPUD1-210ENST00000565966 SORCS1Q8WY21 1168 aa14.27□□□□□ -0.13
HERPUD1-210ENST00000565966 TRIM11Q96F44 468 aa14.27□□□□□ -0.13
HERPUD1-210ENST00000565966 ZC3H10Q96K80 434 aaKnown RBP14.27□□□□□ -0.13
HERPUD1-210ENST00000565966 C1orf74Q96LT6 269 aa14.27□□□□□ -0.13
HERPUD1-210ENST00000565966 RPRD1AQ96P16 312 aaPredicted RBP14.27□□□□□ -0.13
HERPUD1-210ENST00000565966 HINFPQ9BQA5 517 aa14.27□□□□□ -0.13
HERPUD1-210ENST00000565966 SIK2Q9H0K1 926 aa14.27□□□□□ -0.13
HERPUD1-210ENST00000565966 CD248Q9HCU0 757 aa14.27□□□□□ -0.13
HERPUD1-210ENST00000565966 TMPRSS4Q9NRS4 437 aa14.27□□□□□ -0.13
HERPUD1-210ENST00000565966 GMEB2Q9UKD1 530 aa14.27□□□□□ -0.13
HERPUD1-210ENST00000565966 VANGL2Q9ULK5 521 aa14.27□□□□□ -0.13
HERPUD1-210ENST00000565966 RAD54BQ9Y620 910 aa14.27□□□□□ -0.13
HERPUD1-210ENST00000565966 MUC22E2RYF6 1773 aaPredicted RBP14.27□□□□□ -0.13
HERPUD1-210ENST00000565966 GVINP1Q7Z2Y8 2422 aa14.26□□□□□ -0.13
HERPUD1-210ENST00000565966 ZNF292O60281 2723 aa14.26□□□□□ -0.13
HERPUD1-210ENST00000565966 A0A1B0GVM2 712 aa14.26□□□□□ -0.13
HERPUD1-210ENST00000565966 ANKRD62A6NC57 917 aa14.26□□□□□ -0.13
HERPUD1-210ENST00000565966 TCAF2A6NFQ2 919 aa14.26□□□□□ -0.13
HERPUD1-210ENST00000565966 TMEM191CA6NGB0 347 aa14.26□□□□□ -0.13
HERPUD1-210ENST00000565966 MOCS3O95396 460 aa14.26□□□□□ -0.13
HERPUD1-210ENST00000565966 DLDP09622 509 aaKnown RBP14.26□□□□□ -0.13
HERPUD1-210ENST00000565966 GABRG2P18507 467 aa14.26□□□□□ -0.13
HERPUD1-210ENST00000565966 HDAC4P56524 1084 aa14.26□□□□□ -0.13
HERPUD1-210ENST00000565966 OGDHQ02218 1023 aa14.26□□□□□ -0.13
HERPUD1-210ENST00000565966 GFPT1Q06210 699 aaPredicted RBP14.26□□□□□ -0.13
HERPUD1-210ENST00000565966 SLC12A1Q13621 1099 aa14.26□□□□□ -0.13
HERPUD1-210ENST00000565966 BYSLQ13895 437 aaKnown RBP14.26□□□□□ -0.13
HERPUD1-210ENST00000565966 STARD3Q14849 445 aa14.26□□□□□ -0.13
HERPUD1-210ENST00000565966 SLC18A3Q16572 532 aa14.26□□□□□ -0.13
HERPUD1-210ENST00000565966 C5orf22Q49AR2 442 aa14.26□□□□□ -0.13
HERPUD1-210ENST00000565966 FSCBQ5H9T9 825 aa14.26□□□□□ -0.13
HERPUD1-210ENST00000565966 CCDC122Q5T0U0 273 aa14.26□□□□□ -0.13
HERPUD1-210ENST00000565966 KIAA1211LQ6NV74 962 aa14.26□□□□□ -0.13
HERPUD1-210ENST00000565966 SERPINA13PQ6UXR4 307 aa14.26□□□□□ -0.13
HERPUD1-210ENST00000565966 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.26□□□□□ -0.13
HERPUD1-210ENST00000565966 C14orf80Q86SX3 495 aa14.26□□□□□ -0.13
HERPUD1-210ENST00000565966 C11orf74Q86VG3 221 aa14.26□□□□□ -0.13
HERPUD1-210ENST00000565966 CCAR2Q8N163 923 aaKnown RBP14.26□□□□□ -0.13
HERPUD1-210ENST00000565966 CYB5D2Q8WUJ1 264 aa14.26□□□□□ -0.13
HERPUD1-210ENST00000565966 IGSF8Q969P0 613 aa14.26□□□□□ -0.13
HERPUD1-210ENST00000565966 TTC17Q96AE7 1141 aa14.26□□□□□ -0.13
HERPUD1-210ENST00000565966 HAPLN3Q96S86 360 aa14.26□□□□□ -0.13
HERPUD1-210ENST00000565966 CNPY3Q9BT09 278 aa14.26□□□□□ -0.13
HERPUD1-210ENST00000565966 TRIM7Q9C029 511 aa14.26□□□□□ -0.13
HERPUD1-210ENST00000565966 THAP2Q9H0W7 228 aa14.26□□□□□ -0.13
HERPUD1-210ENST00000565966 MYO1AQ9UBC5 1043 aa14.26□□□□□ -0.13
HERPUD1-210ENST00000565966 SNX10Q9Y5X0 201 aa14.26□□□□□ -0.13
HERPUD1-210ENST00000565966 SCINQ9Y6U3 715 aa14.26□□□□□ -0.13
HERPUD1-210ENST00000565966 FRYLO94915 3013 aa14.25□□□□□ -0.13
HERPUD1-210ENST00000565966 SYNCRIPO60506 623 aaKnown RBP14.25□□□□□ -0.13
HERPUD1-210ENST00000565966 ASLP04424 464 aa14.25□□□□□ -0.13
HERPUD1-210ENST00000565966 RETP07949 1114 aa14.25□□□□□ -0.13
HERPUD1-210ENST00000565966 GALCP54803 685 aa14.25□□□□□ -0.13
HERPUD1-210ENST00000565966 OXCT1P55809 520 aa14.25□□□□□ -0.13
HERPUD1-210ENST00000565966 FUT11Q495W5 492 aa14.25□□□□□ -0.13
HERPUD1-210ENST00000565966 LRRC31Q6UY01 552 aa14.25□□□□□ -0.13
HERPUD1-210ENST00000565966 KBTBD6Q86V97 674 aa14.25□□□□□ -0.13
HERPUD1-210ENST00000565966 ZNF683Q8IZ20 524 aa14.25□□□□□ -0.13
HERPUD1-210ENST00000565966 DCLK2Q8N568 766 aa14.25□□□□□ -0.13
HERPUD1-210ENST00000565966 FAM160A2Q8N612 972 aaPredicted RBP14.25□□□□□ -0.13
HERPUD1-210ENST00000565966 LOXL4Q96JB6 756 aa14.25□□□□□ -0.13
HERPUD1-210ENST00000565966 PPP1R9BQ96SB3 815 aa14.25□□□□□ -0.13
HERPUD1-210ENST00000565966 DUSP15Q9H1R2 295 aaPredicted RBP14.25□□□□□ -0.13
HERPUD1-210ENST00000565966 TMEM245Q9H330 911 aa14.25□□□□□ -0.13
HERPUD1-210ENST00000565966 DEF6Q9H4E7 631 aa14.25□□□□□ -0.13
HERPUD1-210ENST00000565966 NHEJ1Q9H9Q4 299 aaPredicted RBP14.25□□□□□ -0.13
HERPUD1-210ENST00000565966 INTS6Q9UL03 887 aaKnown RBP14.25□□□□□ -0.13
HERPUD1-210ENST00000565966 INVSQ9Y283 1065 aa14.25□□□□□ -0.13
HERPUD1-210ENST00000565966 CHD5Q8TDI0 1954 aa14.25□□□□□ -0.13
HERPUD1-210ENST00000565966 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.24□□□□□ -0.13
HERPUD1-210ENST00000565966 DCLK1O15075 740 aa14.24□□□□□ -0.13
HERPUD1-210ENST00000565966 CLDN11O75508 207 aa14.24□□□□□ -0.13
HERPUD1-210ENST00000565966 RHOBTB1O94844 696 aa14.24□□□□□ -0.13
HERPUD1-210ENST00000565966 EPHX1P07099 455 aa14.24□□□□□ -0.13
HERPUD1-210ENST00000565966 NDUFV2P19404 249 aa14.24□□□□□ -0.13
HERPUD1-210ENST00000565966 PRKCHP24723 683 aa14.24□□□□□ -0.13
HERPUD1-210ENST00000565966 ADRA1BP35368 520 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms