RNA–Protein interactions for RNA: ENST00000565511.5

RAB40C-209, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 783 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-209ENST00000565511 MIIPQ5JXC2 388 aa24.54■■□□□ 1.52
RAB40C-209ENST00000565511 OLFML1Q6UWY5 402 aa24.54■■□□□ 1.52
RAB40C-209ENST00000565511 CHCHD4Q8N4Q1 142 aa24.54■■□□□ 1.52
RAB40C-209ENST00000565511 ZNF557Q8N988 423 aaPredicted RBP24.54■■□□□ 1.52
RAB40C-209ENST00000565511 OR52K2Q8NGK3 314 aa24.54■■□□□ 1.52
RAB40C-209ENST00000565511 RPL10LQ96L21 214 aaKnown RBP24.54■■□□□ 1.52
RAB40C-209ENST00000565511 ZDHHC5Q9C0B5 715 aa24.54■■□□□ 1.52
RAB40C-209ENST00000565511 BTBD1Q9H0C5 482 aa24.54■■□□□ 1.52
RAB40C-209ENST00000565511 TM9SF3Q9HD45 589 aa24.54■■□□□ 1.52
RAB40C-209ENST00000565511 DDIT4Q9NX09 232 aa24.54■■□□□ 1.52
RAB40C-209ENST00000565511 ITIH6Q6UXX5 1313 aa24.54■■□□□ 1.52
RAB40C-209ENST00000565511 PLXNB3Q9ULL4 1909 aa24.53■■□□□ 1.52
RAB40C-209ENST00000565511 H0Y626 953 aa24.53■■□□□ 1.52
RAB40C-209ENST00000565511 MID1O15344 667 aa24.53■■□□□ 1.52
RAB40C-209ENST00000565511 FSBPO95073 299 aa24.53■■□□□ 1.52
RAB40C-209ENST00000565511 VAV1P15498 845 aa24.53■■□□□ 1.52
RAB40C-209ENST00000565511 MZF1P28698 734 aaPredicted RBP24.53■■□□□ 1.52
RAB40C-209ENST00000565511 KIF19Q2TAC6 998 aa24.53■■□□□ 1.52
RAB40C-209ENST00000565511 CXorf57Q6NSI4 855 aaKnown RBP24.53■■□□□ 1.52
RAB40C-209ENST00000565511 MLKLQ8NB16 471 aa24.53■■□□□ 1.52
RAB40C-209ENST00000565511 IGSF8Q969P0 613 aa24.53■■□□□ 1.52
RAB40C-209ENST00000565511 FAM129BQ96TA1 746 aa24.53■■□□□ 1.52
RAB40C-209ENST00000565511 TRIM62Q9BVG3 475 aa24.53■■□□□ 1.52
RAB40C-209ENST00000565511 SNX11Q9Y5W9 270 aa24.53■■□□□ 1.52
RAB40C-209ENST00000565511 A0A1W2PP55 124 aa24.52■■□□□ 1.52
RAB40C-209ENST00000565511 PDGFRAP16234 1089 aa24.52■■□□□ 1.52
RAB40C-209ENST00000565511 TFE3P19532 575 aaPredicted RBP24.52■■□□□ 1.52
RAB40C-209ENST00000565511 MATKP42679 507 aa24.52■■□□□ 1.52
RAB40C-209ENST00000565511 ST8SIA6P61647 398 aa24.52■■□□□ 1.52
RAB40C-209ENST00000565511 ARID5BQ14865 1188 aa24.52■■□□□ 1.52
RAB40C-209ENST00000565511 TRIP6Q15654 476 aaKnown RBP24.52■■□□□ 1.52
RAB40C-209ENST00000565511 MAN2A1Q16706 1144 aa24.52■■□□□ 1.52
RAB40C-209ENST00000565511 TTC31Q49AM3 519 aaPredicted RBP24.52■■□□□ 1.52
RAB40C-209ENST00000565511 OR6B2Q6IFH4 312 aa24.52■■□□□ 1.52
RAB40C-209ENST00000565511 MMAAQ8IVH4 418 aaKnown RBP24.52■■□□□ 1.52
RAB40C-209ENST00000565511 CCAR2Q8N163 923 aaKnown RBP24.52■■□□□ 1.52
RAB40C-209ENST00000565511 PNPLA1Q8N8W4 532 aa24.52■■□□□ 1.52
RAB40C-209ENST00000565511 ATP6V0D2Q8N8Y2 350 aa24.52■■□□□ 1.52
RAB40C-209ENST00000565511 EBF2Q9HAK2 575 aa24.52■■□□□ 1.52
RAB40C-209ENST00000565511 ANLNQ9NQW6 1124 aa24.52■■□□□ 1.52
RAB40C-209ENST00000565511 ASNSD1Q9NWL6 643 aa24.52■■□□□ 1.52
RAB40C-209ENST00000565511 CHMP5Q9NZZ3 219 aa24.52■■□□□ 1.52
RAB40C-209ENST00000565511 KIAA1522Q9P206 1035 aaPredicted RBP24.52■■□□□ 1.52
RAB40C-209ENST00000565511 PCOLCE2Q9UKZ9 415 aa24.52■■□□□ 1.52
RAB40C-209ENST00000565511 ZMIZ1Q9ULJ6 1067 aa24.52■■□□□ 1.52
RAB40C-209ENST00000565511 NEUROG3Q9Y4Z2 214 aa24.52■■□□□ 1.52
RAB40C-209ENST00000565511 PTPRBP23467 1997 aa24.52■■□□□ 1.52
RAB40C-209ENST00000565511 DOCK9Q9BZ29 2069 aa24.51■■□□□ 1.51
RAB40C-209ENST00000565511 C10orf142B7Z368 130 aa24.51■■□□□ 1.51
RAB40C-209ENST00000565511 F5H5T6 163 aa24.51■■□□□ 1.51
RAB40C-209ENST00000565511 I6L893 689 aaPredicted RBP24.51■■□□□ 1.51
RAB40C-209ENST00000565511 KCNK3O14649 394 aa24.51■■□□□ 1.51
RAB40C-209ENST00000565511 FTH1P19P0C7X4 201 aa24.51■■□□□ 1.51
RAB40C-209ENST00000565511 METAP1P53582 386 aa24.51■■□□□ 1.51
RAB40C-209ENST00000565511 CDK17Q00537 523 aa24.51■■□□□ 1.51
RAB40C-209ENST00000565511 ECT2LQ008S8 904 aa24.51■■□□□ 1.51
RAB40C-209ENST00000565511 CST6Q15828 149 aa24.51■■□□□ 1.51
RAB40C-209ENST00000565511 FBXL22Q6P050 247 aa24.51■■□□□ 1.51
RAB40C-209ENST00000565511 RAB44Q7Z6P3 723 aaPredicted RBP24.51■■□□□ 1.51
RAB40C-209ENST00000565511 C14orf80Q86SX3 495 aa24.51■■□□□ 1.51
RAB40C-209ENST00000565511 STK40Q8N2I9 435 aa24.51■■□□□ 1.51
RAB40C-209ENST00000565511 AADATQ8N5Z0 425 aa24.51■■□□□ 1.51
RAB40C-209ENST00000565511 KDF1Q8NAX2 398 aaPredicted RBP24.51■■□□□ 1.51
RAB40C-209ENST00000565511 PTPRN2Q92932 1015 aa24.51■■□□□ 1.51
RAB40C-209ENST00000565511 FAM81BQ96LP2 452 aa24.51■■□□□ 1.51
RAB40C-209ENST00000565511 SGK2Q9HBY8 427 aa24.51■■□□□ 1.51
RAB40C-209ENST00000565511 SLTMQ9NWH9 1034 aaKnown RBP eCLIP24.51■■□□□ 1.511e-6■■■□□ 16.2
RAB40C-209ENST00000565511 FBXL12Q9NXK8 326 aa24.51■■□□□ 1.51
RAB40C-209ENST00000565511 RALYQ9UKM9 306 aaKnown RBP24.51■■□□□ 1.51
RAB40C-209ENST00000565511 BTBD3Q9Y2F9 522 aa24.51■■□□□ 1.51
RAB40C-209ENST00000565511 PKD1L2Q7Z442 2459 aa24.51■■□□□ 1.51
RAB40C-209ENST00000565511 HSF2BPO75031 334 aa24.5■■□□□ 1.51
RAB40C-209ENST00000565511 DAB1O75553 588 aa24.5■■□□□ 1.51
RAB40C-209ENST00000565511 GLI1P08151 1106 aa24.5■■□□□ 1.51
RAB40C-209ENST00000565511 SRPRAP08240 638 aaKnown RBP24.5■■□□□ 1.51
RAB40C-209ENST00000565511 PSMD8P48556 350 aa24.5■■□□□ 1.51
RAB40C-209ENST00000565511 AFF3P51826 1226 aaKnown RBP24.5■■□□□ 1.51
RAB40C-209ENST00000565511 KCNMA1Q12791 1236 aa24.5■■□□□ 1.51
RAB40C-209ENST00000565511 KIAA0895LQ68EN5 471 aa24.5■■□□□ 1.51
RAB40C-209ENST00000565511 C11orf57Q6ZUT1 292 aaPredicted RBP24.5■■□□□ 1.51
RAB40C-209ENST00000565511 FAM71AQ8IYT1 594 aa24.5■■□□□ 1.51
RAB40C-209ENST00000565511 KDM1BQ8NB78 822 aa24.5■■□□□ 1.51
RAB40C-209ENST00000565511 BAHD1Q8TBE0 780 aaPredicted RBP24.5■■□□□ 1.51
RAB40C-209ENST00000565511 ALG14Q96F25 216 aa24.5■■□□□ 1.51
RAB40C-209ENST00000565511 NEUROG2Q9H2A3 272 aa24.5■■□□□ 1.51
RAB40C-209ENST00000565511 TM7SF3Q9NS93 570 aa24.5■■□□□ 1.51
RAB40C-209ENST00000565511 SNX10Q9Y5X0 201 aa24.5■■□□□ 1.51
RAB40C-209ENST00000565511 FHOD1Q9Y613 1164 aa24.5■■□□□ 1.51
RAB40C-209ENST00000565511 EDDM13A0A1B0GTR0 161 aa24.49■■□□□ 1.51
RAB40C-209ENST00000565511 FAM47DPA6NHR8 397 aa24.49■■□□□ 1.51
RAB40C-209ENST00000565511 CER1O95813 267 aa24.49■■□□□ 1.51
RAB40C-209ENST00000565511 CD27P26842 260 aa24.49■■□□□ 1.51
RAB40C-209ENST00000565511 GALCP54803 685 aa24.49■■□□□ 1.51
RAB40C-209ENST00000565511 PTK2Q05397 1052 aa24.49■■□□□ 1.51
RAB40C-209ENST00000565511 NME3Q13232 169 aa24.49■■□□□ 1.51
RAB40C-209ENST00000565511 NCEH1Q6PIU2 408 aa24.49■■□□□ 1.51
RAB40C-209ENST00000565511 USP30Q70CQ3 517 aa24.49■■□□□ 1.51
RAB40C-209ENST00000565511 SLC26A9Q7LBE3 791 aa24.49■■□□□ 1.51
RAB40C-209ENST00000565511 SLCO6A1Q86UG4 719 aa24.49■■□□□ 1.51
RAB40C-209ENST00000565511 GANCQ8TET4 914 aa24.49■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 121.3 ms