RNA–Protein interactions for RNA: ENST00000564845.5

CHD9-213, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 11,504 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-213ENST00000564845 S100A7P31151 101 aa3.43□□□□□ -1.86
CHD9-213ENST00000564845 TGFBR2P37173 567 aa3.43□□□□□ -1.86
CHD9-213ENST00000564845 ASPAP45381 313 aa3.43□□□□□ -1.86
CHD9-213ENST00000564845 PTPN20Q4JDL3 420 aa3.43□□□□□ -1.86
CHD9-213ENST00000564845 PRMT9Q6P2P2 845 aa3.43□□□□□ -1.86
CHD9-213ENST00000564845 C4orf50Q6ZRC1 276 aa3.43□□□□□ -1.86
CHD9-213ENST00000564845 S100A7AQ86SG5 101 aa3.43□□□□□ -1.86
CHD9-213ENST00000564845 CDH24Q86UP0 819 aa3.43□□□□□ -1.86
CHD9-213ENST00000564845 ITIH5Q86UX2 942 aa3.43□□□□□ -1.86
CHD9-213ENST00000564845 LMNTD1Q8N9Z9 388 aa3.43□□□□□ -1.86
CHD9-213ENST00000564845 OR6K2Q8NGY2 324 aa3.43□□□□□ -1.86
CHD9-213ENST00000564845 TRIB2Q92519 343 aa3.43□□□□□ -1.86
CHD9-213ENST00000564845 PRCCQ92733 491 aaPredicted RBP3.43□□□□□ -1.86
CHD9-213ENST00000564845 ZNF778Q96MU6 729 aa3.43□□□□□ -1.86
CHD9-213ENST00000564845 FTHL17Q9BXU8 183 aa3.43□□□□□ -1.86
CHD9-213ENST00000564845 SMG9Q9H0W8 520 aaKnown RBP3.43□□□□□ -1.86
CHD9-213ENST00000564845 OSBPL2Q9H1P3 480 aa3.43□□□□□ -1.86
CHD9-213ENST00000564845 NDFIP2Q9NV92 336 aa3.43□□□□□ -1.86
CHD9-213ENST00000564845 TSPAN16Q9UKR8 245 aa3.43□□□□□ -1.86
CHD9-213ENST00000564845 C15orf38-AP3S2A0A0A6YYH1 394 aa3.43□□□□□ -1.86
CHD9-213ENST00000564845 NPC1O15118 1278 aa3.43□□□□□ -1.86
CHD9-213ENST00000564845 HUS1O60921 280 aa3.43□□□□□ -1.86
CHD9-213ENST00000564845 MICAL2O94851 1124 aa3.43□□□□□ -1.86
CHD9-213ENST00000564845 CYBBP04839 570 aa3.43□□□□□ -1.86
CHD9-213ENST00000564845 PPM1AP35813 382 aa3.43□□□□□ -1.86
CHD9-213ENST00000564845 THPOP40225 353 aa3.43□□□□□ -1.86
CHD9-213ENST00000564845 ITGA8P53708 1063 aa3.43□□□□□ -1.86
CHD9-213ENST00000564845 IFT88Q13099 833 aa3.43□□□□□ -1.86
CHD9-213ENST00000564845 TP53BP2Q13625 1128 aa3.43□□□□□ -1.86
CHD9-213ENST00000564845 GRIK4Q16099 956 aa3.43□□□□□ -1.86
CHD9-213ENST00000564845 PAPD7Q5XG87 772 aaKnown RBP3.43□□□□□ -1.86
CHD9-213ENST00000564845 ARPINQ7Z6K5 226 aa3.43□□□□□ -1.86
CHD9-213ENST00000564845 FAM83AQ86UY5 434 aa3.43□□□□□ -1.86
CHD9-213ENST00000564845 ZNF280BQ86YH2 543 aa3.43□□□□□ -1.86
CHD9-213ENST00000564845 STK40Q8N2I9 435 aa3.43□□□□□ -1.86
CHD9-213ENST00000564845 C2orf69Q8N8R5 385 aa3.43□□□□□ -1.86
CHD9-213ENST00000564845 PRELID2Q8N945 189 aa3.43□□□□□ -1.86
CHD9-213ENST00000564845 TRPV1Q8NER1 839 aa3.43□□□□□ -1.86
CHD9-213ENST00000564845 ATP8B4Q8TF62 1192 aa3.43□□□□□ -1.86
CHD9-213ENST00000564845 VMP1Q96GC9 406 aa3.43□□□□□ -1.86
CHD9-213ENST00000564845 IP6K2Q9UHH9 426 aa3.43□□□□□ -1.86
CHD9-213ENST00000564845 SH3BP1Q9Y3L3 701 aa3.43□□□□□ -1.86
CHD9-213ENST00000564845 GSAPA4D1B5 854 aa3.43□□□□□ -1.86
CHD9-213ENST00000564845 URADA6NGE7 173 aa3.43□□□□□ -1.86
CHD9-213ENST00000564845 EVPLLA8MZ36 301 aa3.43□□□□□ -1.86
CHD9-213ENST00000564845 SPATA31C2B4DYI2 1134 aa3.43□□□□□ -1.86
CHD9-213ENST00000564845 CYB561D2O14569 222 aa3.43□□□□□ -1.86
CHD9-213ENST00000564845 GABBR2O75899 941 aa3.43□□□□□ -1.86
CHD9-213ENST00000564845 RECQL4O94761 1208 aa3.43□□□□□ -1.86
CHD9-213ENST00000564845 ACRP10323 421 aa3.43□□□□□ -1.86
CHD9-213ENST00000564845 HSPA9P38646 679 aaKnown RBP3.43□□□□□ -1.86
CHD9-213ENST00000564845 ARHGAP1Q07960 439 aa3.43□□□□□ -1.86
CHD9-213ENST00000564845 PCSK7Q16549 785 aa3.43□□□□□ -1.86
CHD9-213ENST00000564845 TCTN1Q2MV58 587 aa3.43□□□□□ -1.86
CHD9-213ENST00000564845 ZNF697Q5TEC3 545 aa3.43□□□□□ -1.86
CHD9-213ENST00000564845 PACS1Q6VY07 963 aa3.43□□□□□ -1.86
CHD9-213ENST00000564845 CATSPER4Q7RTX7 472 aa3.43□□□□□ -1.86
CHD9-213ENST00000564845 NUDT8Q8WV74 236 aa3.43□□□□□ -1.86
CHD9-213ENST00000564845 HNRNPLLQ8WVV9 542 aaKnown RBP3.43□□□□□ -1.86
CHD9-213ENST00000564845 RASSF5Q8WWW0 418 aa3.43□□□□□ -1.86
CHD9-213ENST00000564845 ACO2Q99798 780 aaKnown RBP3.43□□□□□ -1.86
CHD9-213ENST00000564845 ERAP1Q9NZ08 941 aa3.43□□□□□ -1.86
CHD9-213ENST00000564845 ADAM30Q9UKF2 790 aa3.43□□□□□ -1.86
CHD9-213ENST00000564845 GCATO75600 419 aa3.43□□□□□ -1.86
CHD9-213ENST00000564845 ZMPSTE24O75844 475 aa3.43□□□□□ -1.86
CHD9-213ENST00000564845 RASGRP1O95267 797 aa3.43□□□□□ -1.86
CHD9-213ENST00000564845 IGHA2P01877 340 aa3.43□□□□□ -1.86
CHD9-213ENST00000564845 USP17L7P0C7H9 530 aa3.43□□□□□ -1.86
CHD9-213ENST00000564845 COPS2P61201 443 aa3.43□□□□□ -1.86
CHD9-213ENST00000564845 PIGHQ14442 188 aaPredicted RBP3.43□□□□□ -1.86
CHD9-213ENST00000564845 TAF1BQ53T94 588 aaPredicted RBP3.43□□□□□ -1.86
CHD9-213ENST00000564845 RNF219Q5W0B1 726 aaPredicted RBP3.43□□□□□ -1.86
CHD9-213ENST00000564845 SDE2Q6IQ49 451 aa3.43□□□□□ -1.86
CHD9-213ENST00000564845 MAGED4Q96JG8 741 aa3.43□□□□□ -1.86
CHD9-213ENST00000564845 SMYD2Q9NRG4 433 aa3.43□□□□□ -1.86
CHD9-213ENST00000564845 ANGPTL2Q9UKU9 493 aa3.43□□□□□ -1.86
CHD9-213ENST00000564845 CORO1CQ9ULV4 474 aaPredicted RBP3.43□□□□□ -1.86
CHD9-213ENST00000564845 SATB2Q9UPW6 733 aa3.43□□□□□ -1.86
CHD9-213ENST00000564845 ZNF451Q9Y4E5 1061 aa3.43□□□□□ -1.86
CHD9-213ENST00000564845 PIK3CDO00329 1044 aa3.43□□□□□ -1.86
CHD9-213ENST00000564845 MAGEC1O60732 1142 aa3.43□□□□□ -1.86
CHD9-213ENST00000564845 HSPA4LO95757 839 aa3.43□□□□□ -1.86
CHD9-213ENST00000564845 IFNA14P01570 189 aa3.43□□□□□ -1.86
CHD9-213ENST00000564845 FLT3LGP49771 235 aa3.43□□□□□ -1.86
CHD9-213ENST00000564845 GPS1Q13098 491 aa3.43□□□□□ -1.86
CHD9-213ENST00000564845 PABPC1LQ4VXU2 614 aaKnown RBP3.43□□□□□ -1.86
CHD9-213ENST00000564845 TIGD7Q6NT04 549 aaPredicted RBP3.43□□□□□ -1.86
CHD9-213ENST00000564845 SSX8Q7RTT4 187 aa3.43□□□□□ -1.86
CHD9-213ENST00000564845 ZNF572Q7Z3I7 529 aaPredicted RBP3.43□□□□□ -1.86
CHD9-213ENST00000564845 FRMD5Q7Z6J6 570 aa3.43□□□□□ -1.86
CHD9-213ENST00000564845 C4orf19Q8IY42 314 aa3.43□□□□□ -1.86
CHD9-213ENST00000564845 SAMD14Q8IZD0 417 aaPredicted RBP3.43□□□□□ -1.86
CHD9-213ENST00000564845 LZTR1Q8N653 840 aa3.43□□□□□ -1.86
CHD9-213ENST00000564845 DCBLD1Q8N8Z6 715 aa3.43□□□□□ -1.86
CHD9-213ENST00000564845 CD99L2Q8TCZ2 262 aa3.43□□□□□ -1.86
CHD9-213ENST00000564845 PGBD4Q96DM1 585 aa3.43□□□□□ -1.86
CHD9-213ENST00000564845 FAM193BQ96PV7 902 aaPredicted RBP3.43□□□□□ -1.86
CHD9-213ENST00000564845 NUDCD1Q96RS6 583 aa3.43□□□□□ -1.86
CHD9-213ENST00000564845 ELAC2Q9BQ52 826 aaKnown RBP3.43□□□□□ -1.86
CHD9-213ENST00000564845 C16orf70Q9BSU1 422 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms