RNA–Protein interactions for RNA: ENST00000564844.1

MAP1LC3B-206, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 3,085 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-206ENST00000564844 C1orf127Q8N9H9 656 aa20.98■□□□□ 0.95
MAP1LC3B-206ENST00000564844 COLGALT1Q8NBJ5 622 aa20.98■□□□□ 0.95
MAP1LC3B-206ENST00000564844 SGF29Q96ES7 293 aa20.98■□□□□ 0.95
MAP1LC3B-206ENST00000564844 MCRS1Q96EZ8 462 aa20.98■□□□□ 0.95
MAP1LC3B-206ENST00000564844 KIAA1217Q5T5P2 1943 aa20.98■□□□□ 0.95
MAP1LC3B-206ENST00000564844 ANKRD12Q6UB98 2062 aa20.98■□□□□ 0.95
MAP1LC3B-206ENST00000564844 TK2O00142 265 aa20.98■□□□□ 0.95
MAP1LC3B-206ENST00000564844 FSCBQ5H9T9 825 aa20.98■□□□□ 0.95
MAP1LC3B-206ENST00000564844 NCAPG2Q86XI2 1143 aa20.98■□□□□ 0.95
MAP1LC3B-206ENST00000564844 PPP1R13LQ8WUF5 828 aa20.98■□□□□ 0.95
MAP1LC3B-206ENST00000564844 STK39Q9UEW8 545 aa20.98■□□□□ 0.95
MAP1LC3B-206ENST00000564844 KCNK1O00180 336 aa20.97■□□□□ 0.95
MAP1LC3B-206ENST00000564844 CASQ2O14958 399 aaPredicted RBP20.97■□□□□ 0.95
MAP1LC3B-206ENST00000564844 SDC4P31431 198 aa20.97■□□□□ 0.95
MAP1LC3B-206ENST00000564844 NDST1P52848 882 aa20.97■□□□□ 0.95
MAP1LC3B-206ENST00000564844 RALGDSQ12967 914 aa20.97■□□□□ 0.95
MAP1LC3B-206ENST00000564844 C16orf72Q14CZ0 275 aa20.97■□□□□ 0.95
MAP1LC3B-206ENST00000564844 ANKDD1AQ495B1 522 aa20.97■□□□□ 0.95
MAP1LC3B-206ENST00000564844 ZNF410Q86VK4 478 aa20.97■□□□□ 0.95
MAP1LC3B-206ENST00000564844 PLEKHG4BQ96PX9 1271 aa20.97■□□□□ 0.95
MAP1LC3B-206ENST00000564844 ACO2Q99798 780 aaKnown RBP20.97■□□□□ 0.95
MAP1LC3B-206ENST00000564844 RBM38Q9H0Z9 239 aaKnown RBP20.97■□□□□ 0.95
MAP1LC3B-206ENST00000564844 CDH19Q9H159 772 aa20.97■□□□□ 0.95
MAP1LC3B-206ENST00000564844 DCDC2Q9UHG0 476 aa20.97■□□□□ 0.95
MAP1LC3B-206ENST00000564844 LTBP1Q14766 1721 aa20.97■□□□□ 0.95
MAP1LC3B-206ENST00000564844 BPTFQ12830 3046 aa20.97■□□□□ 0.95
MAP1LC3B-206ENST00000564844 C7orf72A4D263 438 aa20.97■□□□□ 0.95
MAP1LC3B-206ENST00000564844 FAM189A1O60320 539 aa20.97■□□□□ 0.95
MAP1LC3B-206ENST00000564844 STAMBPO95630 424 aa20.97■□□□□ 0.95
MAP1LC3B-206ENST00000564844 CCR3P51677 355 aa20.97■□□□□ 0.95
MAP1LC3B-206ENST00000564844 DCTN2Q13561 401 aaKnown RBP20.97■□□□□ 0.95
MAP1LC3B-206ENST00000564844 ITGA7Q13683 1181 aa20.97■□□□□ 0.95
MAP1LC3B-206ENST00000564844 HSP90AA5PQ58FG0 334 aa20.97■□□□□ 0.95
MAP1LC3B-206ENST00000564844 SAMD7Q7Z3H4 446 aa20.97■□□□□ 0.95
MAP1LC3B-206ENST00000564844 STRA8Q7Z7C7 330 aa20.97■□□□□ 0.95
MAP1LC3B-206ENST00000564844 DIS3LQ8TF46 1054 aaKnown RBP20.97■□□□□ 0.95
MAP1LC3B-206ENST00000564844 TRPV6Q9H1D0 765 aa20.97■□□□□ 0.95
MAP1LC3B-206ENST00000564844 SUDS3Q9H7L9 328 aaPredicted RBP20.97■□□□□ 0.95
MAP1LC3B-206ENST00000564844 DNAJC28Q9NX36 388 aa20.97■□□□□ 0.95
MAP1LC3B-206ENST00000564844 NDUFA13Q9P0J0 144 aa20.97■□□□□ 0.95
MAP1LC3B-206ENST00000564844 SNX13Q9Y5W8 968 aa20.97■□□□□ 0.95
MAP1LC3B-206ENST00000564844 PLOD2O00469 737 aa20.96■□□□□ 0.95
MAP1LC3B-206ENST00000564844 GOT1P17174 413 aa20.96■□□□□ 0.95
MAP1LC3B-206ENST00000564844 NLRP7Q8WX94 980 aa20.96■□□□□ 0.95
MAP1LC3B-206ENST00000564844 LRTOMTQ8WZ04 291 aa20.96■□□□□ 0.95
MAP1LC3B-206ENST00000564844 CIB1Q99828 191 aa20.96■□□□□ 0.95
MAP1LC3B-206ENST00000564844 LHX5Q9H2C1 402 aa20.96■□□□□ 0.95
MAP1LC3B-206ENST00000564844 COQ10BQ9H8M1 238 aa20.96■□□□□ 0.95
MAP1LC3B-206ENST00000564844 WDR41Q9HAD4 459 aa20.96■□□□□ 0.95
MAP1LC3B-206ENST00000564844 GMPR2Q9P2T1 348 aaKnown RBP20.96■□□□□ 0.95
MAP1LC3B-206ENST00000564844 WNT10BO00744 389 aa20.96■□□□□ 0.95
MAP1LC3B-206ENST00000564844 PHGDHO43175 533 aaKnown RBP20.96■□□□□ 0.95
MAP1LC3B-206ENST00000564844 DENRO43583 198 aaKnown RBP20.96■□□□□ 0.95
MAP1LC3B-206ENST00000564844 TPH1P17752 444 aa20.96■□□□□ 0.95
MAP1LC3B-206ENST00000564844 PSMC3P17980 439 aa20.96■□□□□ 0.95
MAP1LC3B-206ENST00000564844 CDH2P19022 906 aaPredicted RBP20.96■□□□□ 0.95
MAP1LC3B-206ENST00000564844 PSMB4P28070 264 aa20.96■□□□□ 0.95
MAP1LC3B-206ENST00000564844 EMP3P54852 163 aa20.96■□□□□ 0.95
MAP1LC3B-206ENST00000564844 DBN1Q16643 649 aa20.96■□□□□ 0.95
MAP1LC3B-206ENST00000564844 EPGNQ6UW88 154 aa20.96■□□□□ 0.95
MAP1LC3B-206ENST00000564844 DLK2Q6UY11 383 aa20.96■□□□□ 0.95
MAP1LC3B-206ENST00000564844 LPCAT2Q7L5N7 544 aa20.96■□□□□ 0.95
MAP1LC3B-206ENST00000564844 CCNYL1Q8N7R7 359 aa20.96■□□□□ 0.95
MAP1LC3B-206ENST00000564844 TSPAN14Q8NG11 270 aa20.96■□□□□ 0.95
MAP1LC3B-206ENST00000564844 FAM110BQ8TC76 370 aa20.96■□□□□ 0.95
MAP1LC3B-206ENST00000564844 PPWD1Q96BP3 646 aaKnown RBP20.96■□□□□ 0.95
MAP1LC3B-206ENST00000564844 OMDQ99983 421 aa20.96■□□□□ 0.95
MAP1LC3B-206ENST00000564844 GATA5Q9BWX5 397 aaPredicted RBP20.96■□□□□ 0.95
MAP1LC3B-206ENST00000564844 MRPS26Q9BYN8 205 aaKnown RBP20.96■□□□□ 0.95
MAP1LC3B-206ENST00000564844 RIMS3Q9UJD0 308 aa20.96■□□□□ 0.95
MAP1LC3B-206ENST00000564844 CPSF3Q9UKF6 684 aaKnown RBP20.96■□□□□ 0.95
MAP1LC3B-206ENST00000564844 SYNPO2Q9UMS6 1093 aa20.96■□□□□ 0.95
MAP1LC3B-206ENST00000564844 DMTF1Q9Y222 760 aa20.96■□□□□ 0.95
MAP1LC3B-206ENST00000564844 STRNO43815 780 aa20.96■□□□□ 0.95
MAP1LC3B-206ENST00000564844 ENDOD1O94919 500 aa20.96■□□□□ 0.95
MAP1LC3B-206ENST00000564844 PDGFRBP09619 1106 aa20.96■□□□□ 0.95
MAP1LC3B-206ENST00000564844 MX2P20592 715 aa20.96■□□□□ 0.95
MAP1LC3B-206ENST00000564844 ENTPD1P49961 510 aa20.96■□□□□ 0.95
MAP1LC3B-206ENST00000564844 NAGLUP54802 743 aa20.96■□□□□ 0.95
MAP1LC3B-206ENST00000564844 LAMTOR4Q0VGL1 99 aa20.96■□□□□ 0.95
MAP1LC3B-206ENST00000564844 ZNF669Q96BR6 464 aaPredicted RBP20.96■□□□□ 0.95
MAP1LC3B-206ENST00000564844 SCYL1Q96KG9 808 aa20.96■□□□□ 0.95
MAP1LC3B-206ENST00000564844 FCRL3Q96P31 734 aaPredicted RBP20.96■□□□□ 0.95
MAP1LC3B-206ENST00000564844 RTKNQ9BST9 563 aa20.96■□□□□ 0.95
MAP1LC3B-206ENST00000564844 UBP1Q9NZI7 540 aa20.96■□□□□ 0.95
MAP1LC3B-206ENST00000564844 EPS15L1Q9UBC2 864 aa20.96■□□□□ 0.95
MAP1LC3B-206ENST00000564844 TRPC5Q9UL62 973 aaPredicted RBP20.96■□□□□ 0.95
MAP1LC3B-206ENST00000564844 A0A096LPK6 155 aa20.95■□□□□ 0.94
MAP1LC3B-206ENST00000564844 CKMT2P17540 419 aa20.95■□□□□ 0.94
MAP1LC3B-206ENST00000564844 SERPINB8P50452 374 aa20.95■□□□□ 0.94
MAP1LC3B-206ENST00000564844 PITRM1Q5JRX3 1037 aa20.95■□□□□ 0.94
MAP1LC3B-206ENST00000564844 ACOT1Q86TX2 421 aa20.95■□□□□ 0.94
MAP1LC3B-206ENST00000564844 FAM131BQ86XD5 332 aa20.95■□□□□ 0.94
MAP1LC3B-206ENST00000564844 RDM1Q8NG50 284 aa20.95■□□□□ 0.94
MAP1LC3B-206ENST00000564844 OR52K1Q8NGK4 314 aa20.95■□□□□ 0.94
MAP1LC3B-206ENST00000564844 KBTBD7Q8WVZ9 684 aa20.95■□□□□ 0.94
MAP1LC3B-206ENST00000564844 C6orf203Q9P0P8 240 aaPredicted RBP20.95■□□□□ 0.94
MAP1LC3B-206ENST00000564844 CEPT1Q9Y6K0 416 aa20.95■□□□□ 0.94
MAP1LC3B-206ENST00000564844 QSER1Q2KHR3 1735 aa20.95■□□□□ 0.94
MAP1LC3B-206ENST00000564844 THRAP10827 490 aa20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms