RNA–Protein interactions for RNA: ENST00000564676.5

CDH1-206, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-206ENST00000564676 PTPN9P43378 593 aa10.25□□□□□ -0.77
CDH1-206ENST00000564676 OXCT1P55809 520 aa10.25□□□□□ -0.77
CDH1-206ENST00000564676 BYSLQ13895 437 aaKnown RBP10.25□□□□□ -0.77
CDH1-206ENST00000564676 FUT11Q495W5 492 aa10.25□□□□□ -0.77
CDH1-206ENST00000564676 FSCBQ5H9T9 825 aa10.25□□□□□ -0.77
CDH1-206ENST00000564676 ACBD5Q5T8D3 534 aaPredicted RBP10.25□□□□□ -0.77
CDH1-206ENST00000564676 SH3PXD2AQ5TCZ1 1133 aa10.25□□□□□ -0.77
CDH1-206ENST00000564676 SPECC1LQ69YQ0 1117 aa10.25□□□□□ -0.77
CDH1-206ENST00000564676 STRADAQ7RTN6 431 aa10.25□□□□□ -0.77
CDH1-206ENST00000564676 BNIPLQ7Z465 357 aa10.25□□□□□ -0.77
CDH1-206ENST00000564676 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.25□□□□□ -0.77
CDH1-206ENST00000564676 KIAA0907Q7Z7F0 614 aaPredicted RBP10.25□□□□□ -0.77
CDH1-206ENST00000564676 DNAAF5Q86Y56 855 aa10.25□□□□□ -0.77
CDH1-206ENST00000564676 CCAR2Q8N163 923 aaKnown RBP10.25□□□□□ -0.77
CDH1-206ENST00000564676 OLIG1Q8TAK6 271 aa10.25□□□□□ -0.77
CDH1-206ENST00000564676 FAM172AQ8WUF8 416 aa10.25□□□□□ -0.77
CDH1-206ENST00000564676 RUBCNQ92622 972 aa10.25□□□□□ -0.77
CDH1-206ENST00000564676 MARVELD3Q96A59 401 aa10.25□□□□□ -0.77
CDH1-206ENST00000564676 LMLNQ96KR4 655 aa10.25□□□□□ -0.77
CDH1-206ENST00000564676 C1orf74Q96LT6 269 aa10.25□□□□□ -0.77
CDH1-206ENST00000564676 MCEEQ96PE7 176 aa10.25□□□□□ -0.77
CDH1-206ENST00000564676 HAPLN3Q96S86 360 aa10.25□□□□□ -0.77
CDH1-206ENST00000564676 PPP1R9BQ96SB3 815 aa10.25□□□□□ -0.77
CDH1-206ENST00000564676 ANLNQ9NQW6 1124 aa10.25□□□□□ -0.77
CDH1-206ENST00000564676 TMPRSS4Q9NRS4 437 aa10.25□□□□□ -0.77
CDH1-206ENST00000564676 PARVAQ9NVD7 372 aa10.25□□□□□ -0.77
CDH1-206ENST00000564676 GPR179Q6PRD1 2367 aa10.24□□□□□ -0.77
CDH1-206ENST00000564676 TCRBV5S1A1TA0A578 114 aa10.24□□□□□ -0.77
CDH1-206ENST00000564676 E9PAM4 449 aa10.24□□□□□ -0.77
CDH1-206ENST00000564676 I6L893 689 aaPredicted RBP10.24□□□□□ -0.77
CDH1-206ENST00000564676 RTN2O75298 545 aa10.24□□□□□ -0.77
CDH1-206ENST00000564676 CLDN11O75508 207 aa10.24□□□□□ -0.77
CDH1-206ENST00000564676 RHOBTB1O94844 696 aa10.24□□□□□ -0.77
CDH1-206ENST00000564676 ASLP04424 464 aa10.24□□□□□ -0.77
CDH1-206ENST00000564676 EPHX1P07099 455 aa10.24□□□□□ -0.77
CDH1-206ENST00000564676 HLA-EP13747 358 aa10.24□□□□□ -0.77
CDH1-206ENST00000564676 GABRG2P18507 467 aa10.24□□□□□ -0.77
CDH1-206ENST00000564676 PRKCHP24723 683 aa10.24□□□□□ -0.77
CDH1-206ENST00000564676 ADRA1BP35368 520 aa10.24□□□□□ -0.77
CDH1-206ENST00000564676 IRAK1P51617 712 aa10.24□□□□□ -0.77
CDH1-206ENST00000564676 ZNF143P52747 638 aaPredicted RBP10.24□□□□□ -0.77
CDH1-206ENST00000564676 EMP3P54852 163 aa10.24□□□□□ -0.77
CDH1-206ENST00000564676 CDH4P55283 916 aa10.24□□□□□ -0.77
CDH1-206ENST00000564676 ST8SIA6P61647 398 aa10.24□□□□□ -0.77
CDH1-206ENST00000564676 RPL7AP62424 266 aaKnown RBP10.24□□□□□ -0.77
CDH1-206ENST00000564676 MAMLD1Q13495 774 aa10.24□□□□□ -0.77
CDH1-206ENST00000564676 SLC12A1Q13621 1099 aa10.24□□□□□ -0.77
CDH1-206ENST00000564676 ENPP2Q13822 863 aa10.24□□□□□ -0.77
CDH1-206ENST00000564676 TRIM14Q14142 442 aa10.24□□□□□ -0.77
CDH1-206ENST00000564676 ELF2Q15723 593 aa10.24□□□□□ -0.77
CDH1-206ENST00000564676 TSR1Q2NL82 804 aaKnown RBP10.24□□□□□ -0.77
CDH1-206ENST00000564676 PLEKHG6Q3KR16 790 aa10.24□□□□□ -0.77
CDH1-206ENST00000564676 RAB6CQ53S08 254 aa10.24□□□□□ -0.77
CDH1-206ENST00000564676 PITRM1Q5JRX3 1037 aa10.24□□□□□ -0.77
CDH1-206ENST00000564676 RNF219Q5W0B1 726 aaPredicted RBP10.24□□□□□ -0.77
CDH1-206ENST00000564676 HGSNATQ68CP4 663 aa10.24□□□□□ -0.77
CDH1-206ENST00000564676 LAIR1Q6GTX8 287 aa10.24□□□□□ -0.77
CDH1-206ENST00000564676 SCYL2Q6P3W7 929 aa10.24□□□□□ -0.77
CDH1-206ENST00000564676 KIAA1324Q6UXG2 1013 aaKnown RBP10.24□□□□□ -0.77
CDH1-206ENST00000564676 KBTBD6Q86V97 674 aa10.24□□□□□ -0.77
CDH1-206ENST00000564676 C11orf74Q86VG3 221 aa10.24□□□□□ -0.77
CDH1-206ENST00000564676 VSTM4Q8IW00 320 aa10.24□□□□□ -0.77
CDH1-206ENST00000564676 APCDD1Q8J025 514 aa10.24□□□□□ -0.77
CDH1-206ENST00000564676 DCLK2Q8N568 766 aa10.24□□□□□ -0.77
CDH1-206ENST00000564676 FAM160A2Q8N612 972 aaPredicted RBP10.24□□□□□ -0.77
CDH1-206ENST00000564676 RLN3Q8WXF3 142 aa10.24□□□□□ -0.77
CDH1-206ENST00000564676 CENPIQ92674 756 aaPredicted RBP10.24□□□□□ -0.77
CDH1-206ENST00000564676 TTC17Q96AE7 1141 aa10.24□□□□□ -0.77
CDH1-206ENST00000564676 ZNF653Q96CK0 615 aa10.24□□□□□ -0.77
CDH1-206ENST00000564676 TRIM11Q96F44 468 aa10.24□□□□□ -0.77
CDH1-206ENST00000564676 SPACA7Q96KW9 195 aa10.24□□□□□ -0.77
CDH1-206ENST00000564676 TRIM5Q9C035 493 aa10.24□□□□□ -0.77
CDH1-206ENST00000564676 RAB6CQ9H0N0 254 aa10.24□□□□□ -0.77
CDH1-206ENST00000564676 MYO1AQ9UBC5 1043 aa10.24□□□□□ -0.77
CDH1-206ENST00000564676 CNOT8Q9UFF9 292 aaKnown RBP10.24□□□□□ -0.77
CDH1-206ENST00000564676 SUN2Q9UH99 717 aa10.24□□□□□ -0.77
CDH1-206ENST00000564676 ADAMTS1Q9UHI8 967 aa10.24□□□□□ -0.77
CDH1-206ENST00000564676 INTS6Q9UL03 887 aaKnown RBP10.24□□□□□ -0.77
CDH1-206ENST00000564676 ZFHX2Q9C0A1 2572 aaPredicted RBP10.24□□□□□ -0.77
CDH1-206ENST00000564676 EML5Q05BV3 1969 aa10.24□□□□□ -0.77
CDH1-206ENST00000564676 EP300Q09472 2414 aaPredicted RBP10.24□□□□□ -0.77
CDH1-206ENST00000564676 GON4LQ3T8J9 2241 aa10.23□□□□□ -0.77
CDH1-206ENST00000564676 RALGAPA1Q6GYQ0 2036 aa10.23□□□□□ -0.77
CDH1-206ENST00000564676 DRGXA6NNA5 263 aa10.23□□□□□ -0.77
CDH1-206ENST00000564676 CCP110O43303 1012 aa10.23□□□□□ -0.77
CDH1-206ENST00000564676 CNTN5O94779 1100 aa10.23□□□□□ -0.77
CDH1-206ENST00000564676 RHOCP08134 193 aa10.23□□□□□ -0.77
CDH1-206ENST00000564676 PLEKP08567 350 aaPredicted RBP10.23□□□□□ -0.77
CDH1-206ENST00000564676 MYBL1P10243 752 aa10.23□□□□□ -0.77
CDH1-206ENST00000564676 NDUFV2P19404 249 aa10.23□□□□□ -0.77
CDH1-206ENST00000564676 PSMA2P25787 234 aa10.23□□□□□ -0.77
CDH1-206ENST00000564676 MZF1P28698 734 aaPredicted RBP10.23□□□□□ -0.77
CDH1-206ENST00000564676 NNMTP40261 264 aa10.23□□□□□ -0.77
CDH1-206ENST00000564676 NUMBP49757 651 aa10.23□□□□□ -0.77
CDH1-206ENST00000564676 HDAC4P56524 1084 aa10.23□□□□□ -0.77
CDH1-206ENST00000564676 ECT2LQ008S8 904 aa10.23□□□□□ -0.77
CDH1-206ENST00000564676 SULT2A1Q06520 285 aa10.23□□□□□ -0.77
CDH1-206ENST00000564676 PTPRNQ16849 979 aa10.23□□□□□ -0.77
CDH1-206ENST00000564676 PLK5Q496M5 336 aa10.23□□□□□ -0.77
CDH1-206ENST00000564676 C5orf22Q49AR2 442 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms