RNA–Protein interactions for RNA: ENST00000563367.1

NME3-203, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 3

Gene NME3, Length 891 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-203ENST00000563367 ARTNQ5T4W7 220 aa29.18■■■□□ 2.26
NME3-203ENST00000563367 CXorf57Q6NSI4 855 aaKnown RBP29.18■■■□□ 2.26
NME3-203ENST00000563367 C11orf74Q86VG3 221 aa29.18■■■□□ 2.26
NME3-203ENST00000563367 C3orf20Q8ND61 904 aa29.18■■■□□ 2.26
NME3-203ENST00000563367 MYO19Q96H55 970 aa29.18■■■□□ 2.26
NME3-203ENST00000563367 SELENOOQ9BVL4 669 aa29.18■■■□□ 2.26
NME3-203ENST00000563367 TMEM51Q9NW97 253 aa29.18■■■□□ 2.26
NME3-203ENST00000563367 USP18Q9UMW8 372 aa29.18■■■□□ 2.26
NME3-203ENST00000563367 PAXBP1Q9Y5B6 917 aa29.18■■■□□ 2.26
NME3-203ENST00000563367 LRP3O75074 770 aa29.17■■■□□ 2.26
NME3-203ENST00000563367 SKILP12757 684 aa29.17■■■□□ 2.26
NME3-203ENST00000563367 SDC4P31431 198 aa29.17■■■□□ 2.26
NME3-203ENST00000563367 PRKCIP41743 596 aa29.17■■■□□ 2.26
NME3-203ENST00000563367 CTSOP43234 321 aaPredicted RBP29.17■■■□□ 2.26
NME3-203ENST00000563367 NUMBP49757 651 aa29.17■■■□□ 2.26
NME3-203ENST00000563367 COPAP53621 1224 aa29.17■■■□□ 2.26
NME3-203ENST00000563367 BYSLQ13895 437 aaKnown RBP29.17■■■□□ 2.26
NME3-203ENST00000563367 PLEKHG6Q3KR16 790 aa29.17■■■□□ 2.26
NME3-203ENST00000563367 KIAA1324Q6UXG2 1013 aaKnown RBP29.17■■■□□ 2.26
NME3-203ENST00000563367 MCOLN2Q8IZK6 566 aa29.17■■■□□ 2.26
NME3-203ENST00000563367 GPR161Q8N6U8 529 aaKnown RBP29.17■■■□□ 2.26
NME3-203ENST00000563367 OR52K2Q8NGK3 314 aa29.17■■■□□ 2.26
NME3-203ENST00000563367 MRGPRX3Q96LB0 322 aa29.17■■■□□ 2.26
NME3-203ENST00000563367 NUP58Q9BVL2 599 aa29.17■■■□□ 2.26
NME3-203ENST00000563367 PRDM16Q9HAZ2 1276 aa29.17■■■□□ 2.26
NME3-203ENST00000563367 SEMA4GQ9NTN9 838 aa29.17■■■□□ 2.26
NME3-203ENST00000563367 NYNRINQ9P2P1 1898 aaKnown RBP29.17■■■□□ 2.26
NME3-203ENST00000563367 SIGLEC16A6NMB1 481 aa29.16■■■□□ 2.26
NME3-203ENST00000563367 TMCO5BA8MYB1 307 aa29.16■■■□□ 2.26
NME3-203ENST00000563367 MAP3K13O43283 966 aa29.16■■■□□ 2.26
NME3-203ENST00000563367 CNTN5O94779 1100 aa29.16■■■□□ 2.26
NME3-203ENST00000563367 MZF1P28698 734 aaPredicted RBP29.16■■■□□ 2.26
NME3-203ENST00000563367 PTPN9P43378 593 aa29.16■■■□□ 2.26
NME3-203ENST00000563367 CAMK2GQ13555 558 aaPredicted RBP29.16■■■□□ 2.26
NME3-203ENST00000563367 WDR59Q6PJI9 974 aa29.16■■■□□ 2.26
NME3-203ENST00000563367 LRSAM1Q6UWE0 723 aa29.16■■■□□ 2.26
NME3-203ENST00000563367 DNAAF5Q86Y56 855 aa29.16■■■□□ 2.26
NME3-203ENST00000563367 TMPRSS6Q8IU80 811 aa29.16■■■□□ 2.26
NME3-203ENST00000563367 CENPIQ92674 756 aaPredicted RBP29.16■■■□□ 2.26
NME3-203ENST00000563367 C1orf74Q96LT6 269 aa29.16■■■□□ 2.26
NME3-203ENST00000563367 TSPY26PQ9H489 355 aa29.16■■■□□ 2.26
NME3-203ENST00000563367 MTG2Q9H4K7 406 aa29.16■■■□□ 2.26
NME3-203ENST00000563367 CYP8B1Q9UNU6 501 aa29.16■■■□□ 2.26
NME3-203ENST00000563367 CEP250Q9BV73 2442 aa29.15■■■□□ 2.26
NME3-203ENST00000563367 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa29.15■■■□□ 2.26
NME3-203ENST00000563367 IGHV1OR15-9A0A0B4J2B8 117 aa29.15■■■□□ 2.26
NME3-203ENST00000563367 ASLP04424 464 aa29.15■■■□□ 2.26
NME3-203ENST00000563367 RRM1P23921 792 aa29.15■■■□□ 2.26
NME3-203ENST00000563367 CSRP2Q16527 193 aa29.15■■■□□ 2.26
NME3-203ENST00000563367 ALFQ53S48 1182 aa29.15■■■□□ 2.26
NME3-203ENST00000563367 TMEFF1Q8IYR6 380 aa29.15■■■□□ 2.26
NME3-203ENST00000563367 HAPLN3Q96S86 360 aa29.15■■■□□ 2.26
NME3-203ENST00000563367 ERVW-1Q9UQF0 538 aa29.15■■■□□ 2.26
NME3-203ENST00000563367 A0A1W2PQJ5 194 aa29.14■■■□□ 2.26
NME3-203ENST00000563367 ZNF217O75362 1048 aa29.14■■■□□ 2.26
NME3-203ENST00000563367 MOCS3O95396 460 aa29.14■■■□□ 2.26
NME3-203ENST00000563367 GPD1P21695 349 aa29.14■■■□□ 2.26
NME3-203ENST00000563367 RPL7AP62424 266 aaKnown RBP29.14■■■□□ 2.26
NME3-203ENST00000563367 KLHL30Q0D2K2 578 aa29.14■■■□□ 2.26
NME3-203ENST00000563367 SLC12A1Q13621 1099 aa29.14■■■□□ 2.26
NME3-203ENST00000563367 PPP1R15BQ5SWA1 713 aa29.14■■■□□ 2.26
NME3-203ENST00000563367 DNAJC24Q6P3W2 148 aa29.14■■■□□ 2.26
NME3-203ENST00000563367 ALG14Q96F25 216 aa29.14■■■□□ 2.26
NME3-203ENST00000563367 XPO4Q9C0E2 1151 aaKnown RBP29.14■■■□□ 2.26
NME3-203ENST00000563367 PRSS16Q9NQE7 514 aa29.14■■■□□ 2.26
NME3-203ENST00000563367 PCDHGA5Q9Y5G8 931 aa29.14■■■□□ 2.26
NME3-203ENST00000563367 DYNC1LI1Q9Y6G9 523 aaKnown RBP29.14■■■□□ 2.26
NME3-203ENST00000563367 PI4KAP42356 2102 aa29.14■■■□□ 2.25
NME3-203ENST00000563367 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP29.13■■■□□ 2.25
NME3-203ENST00000563367 DRGXA6NNA5 263 aa29.13■■■□□ 2.25
NME3-203ENST00000563367 DDX3XO00571 662 aaKnown RBP eCLIP29.13■■■□□ 2.253e-7■■■■■ 28.4
NME3-203ENST00000563367 CLDN11O75508 207 aa29.13■■■□□ 2.25
NME3-203ENST00000563367 PLK1P53350 603 aa29.13■■■□□ 2.25
NME3-203ENST00000563367 CDH4P55283 916 aa29.13■■■□□ 2.25
NME3-203ENST00000563367 HDAC4P56524 1084 aa29.13■■■□□ 2.25
NME3-203ENST00000563367 CREB5Q02930 508 aa29.13■■■□□ 2.25
NME3-203ENST00000563367 ZNF177Q13360 481 aaPredicted RBP29.13■■■□□ 2.25
NME3-203ENST00000563367 PLA2G2CQ5R387 149 aa29.13■■■□□ 2.25
NME3-203ENST00000563367 LPCAT2Q7L5N7 544 aa29.13■■■□□ 2.25
NME3-203ENST00000563367 STRADAQ7RTN6 431 aa29.13■■■□□ 2.25
NME3-203ENST00000563367 CACUL1Q86Y37 369 aa29.13■■■□□ 2.25
NME3-203ENST00000563367 OR2T3Q8NH03 318 aa29.13■■■□□ 2.25
NME3-203ENST00000563367 FAM172AQ8WUF8 416 aa29.13■■■□□ 2.25
NME3-203ENST00000563367 CPLX3Q8WVH0 158 aa29.13■■■□□ 2.25
NME3-203ENST00000563367 SMOC1Q9H4F8 434 aa29.13■■■□□ 2.25
NME3-203ENST00000563367 SLCO3A1Q9UIG8 710 aa29.13■■■□□ 2.25
NME3-203ENST00000563367 NUMA1Q14980 2115 aa29.12■■■□□ 2.25
NME3-203ENST00000563367 IGLV3-10A0A075B6K4 115 aa29.12■■■□□ 2.25
NME3-203ENST00000563367 BCLAF3A2AJT9 711 aaKnown RBP29.12■■■□□ 2.25
NME3-203ENST00000563367 E9PAM4 449 aa29.12■■■□□ 2.25
NME3-203ENST00000563367 ADRA1BP35368 520 aa29.12■■■□□ 2.25
NME3-203ENST00000563367 MPLP40238 635 aa29.12■■■□□ 2.25
NME3-203ENST00000563367 DHPSP49366 369 aaPredicted RBP29.12■■■□□ 2.25
NME3-203ENST00000563367 ECT2LQ008S8 904 aa29.12■■■□□ 2.25
NME3-203ENST00000563367 PRR23CQ6ZRP0 262 aa29.12■■■□□ 2.25
NME3-203ENST00000563367 METTL3Q86U44 580 aaKnown RBP29.12■■■□□ 2.25
NME3-203ENST00000563367 DEFB119Q8N690 84 aa29.12■■■□□ 2.25
NME3-203ENST00000563367 SIPA1Q96FS4 1042 aa29.12■■■□□ 2.25
NME3-203ENST00000563367 VCPIP1Q96JH7 1222 aa29.12■■■□□ 2.25
NME3-203ENST00000563367 RPL10LQ96L21 214 aaKnown RBP29.12■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms