RNA–Protein interactions for RNA: ENST00000563239.1

UBR1-204, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-204ENST00000563239 SCAPQ12770 1279 aa8.81□□□□□ -1
UBR1-204ENST00000563239 SRSF5Q13243 272 aaKnown RBP8.81□□□□□ -1
UBR1-204ENST00000563239 ZNF234Q14588 700 aa8.81□□□□□ -1
UBR1-204ENST00000563239 EIF4HQ15056 248 aaKnown RBP8.81□□□□□ -1
UBR1-204ENST00000563239 SLC18A3Q16572 532 aa8.81□□□□□ -1
UBR1-204ENST00000563239 PITRM1Q5JRX3 1037 aa8.81□□□□□ -1
UBR1-204ENST00000563239 EOGTQ5NDL2 527 aa8.81□□□□□ -1
UBR1-204ENST00000563239 RABGAP1LQ5R372 815 aa8.81□□□□□ -1
UBR1-204ENST00000563239 CCDC122Q5T0U0 273 aa8.81□□□□□ -1
UBR1-204ENST00000563239 TTC39BQ5VTQ0 682 aaPredicted RBP8.81□□□□□ -1
UBR1-204ENST00000563239 MBLAC2Q68D91 279 aa8.81□□□□□ -1
UBR1-204ENST00000563239 HEATR6Q6AI08 1181 aaKnown RBP8.81□□□□□ -1
UBR1-204ENST00000563239 KIAA1211LQ6NV74 962 aa8.81□□□□□ -1
UBR1-204ENST00000563239 ALKBH5Q6P6C2 394 aaKnown RBP8.81□□□□□ -1
UBR1-204ENST00000563239 DCUN1D2Q6PH85 259 aa8.81□□□□□ -1
UBR1-204ENST00000563239 NUDT18Q6ZVK8 323 aa8.81□□□□□ -1
UBR1-204ENST00000563239 CYP4V2Q6ZWL3 525 aaPredicted RBP8.81□□□□□ -1
UBR1-204ENST00000563239 WDR5BQ86VZ2 330 aa8.81□□□□□ -1
UBR1-204ENST00000563239 LONP2Q86WA8 852 aa8.81□□□□□ -1
UBR1-204ENST00000563239 APCDD1Q8J025 514 aa8.81□□□□□ -1
UBR1-204ENST00000563239 AHI1Q8N157 1196 aa8.81□□□□□ -1
UBR1-204ENST00000563239 PYROXD2Q8N2H3 581 aa8.81□□□□□ -1
UBR1-204ENST00000563239 CAMKK1Q8N5S9 505 aa8.81□□□□□ -1
UBR1-204ENST00000563239 WFIKKN2Q8TEU8 576 aa8.81□□□□□ -1
UBR1-204ENST00000563239 FNIP1Q8TF40 1166 aa8.81□□□□□ -1
UBR1-204ENST00000563239 CYB5D2Q8WUJ1 264 aa8.81□□□□□ -1
UBR1-204ENST00000563239 NTAN1Q96AB6 310 aa8.81□□□□□ -1
UBR1-204ENST00000563239 MYO19Q96H55 970 aa8.81□□□□□ -1
UBR1-204ENST00000563239 MRGPRX3Q96LB0 322 aa8.81□□□□□ -1
UBR1-204ENST00000563239 RPRD1AQ96P16 312 aaPredicted RBP8.81□□□□□ -1
UBR1-204ENST00000563239 PACSIN1Q9BY11 444 aa8.81□□□□□ -1
UBR1-204ENST00000563239 OSBPL2Q9H1P3 480 aa8.81□□□□□ -1
UBR1-204ENST00000563239 MPP6Q9NZW5 540 aa8.81□□□□□ -1
UBR1-204ENST00000563239 MYO1AQ9UBC5 1043 aa8.81□□□□□ -1
UBR1-204ENST00000563239 TBC1D30Q9Y2I9 924 aa8.81□□□□□ -1
UBR1-204ENST00000563239 PAXBP1Q9Y5B6 917 aa8.81□□□□□ -1
UBR1-204ENST00000563239 PCDHGA2Q9Y5H1 932 aa8.81□□□□□ -1
UBR1-204ENST00000563239 OR51B4Q9Y5P0 310 aa8.81□□□□□ -1
UBR1-204ENST00000563239 RAD54BQ9Y620 910 aa8.81□□□□□ -1
UBR1-204ENST00000563239 STON1Q9Y6Q2 735 aa8.81□□□□□ -1
UBR1-204ENST00000563239 CCDC163A0A0D9SF12 145 aa8.8□□□□□ -1
UBR1-204ENST00000563239 H0Y626 953 aa8.8□□□□□ -1
UBR1-204ENST00000563239 SRGAP2O75044 1071 aa8.8□□□□□ -1
UBR1-204ENST00000563239 CLDN11O75508 207 aa8.8□□□□□ -1
UBR1-204ENST00000563239 HOXB2P14652 356 aa8.8□□□□□ -1
UBR1-204ENST00000563239 PSMA2P25787 234 aa8.8□□□□□ -1
UBR1-204ENST00000563239 CSKP41240 450 aa8.8□□□□□ -1
UBR1-204ENST00000563239 CTSOP43234 321 aaPredicted RBP8.8□□□□□ -1
UBR1-204ENST00000563239 DGKEP52429 567 aa8.8□□□□□ -1
UBR1-204ENST00000563239 NRLP54845 237 aa8.8□□□□□ -1
UBR1-204ENST00000563239 CDH4P55283 916 aa8.8□□□□□ -1
UBR1-204ENST00000563239 SEMA3BQ13214 749 aa8.8□□□□□ -1
UBR1-204ENST00000563239 CDH18Q13634 790 aa8.8□□□□□ -1
UBR1-204ENST00000563239 PLEKHG6Q3KR16 790 aa8.8□□□□□ -1
UBR1-204ENST00000563239 DAB2IPQ5VWQ8 1189 aa8.8□□□□□ -1
UBR1-204ENST00000563239 TRMT11Q7Z4G4 463 aaKnown RBP8.8□□□□□ -1
UBR1-204ENST00000563239 VPS36Q86VN1 386 aa8.8□□□□□ -1
UBR1-204ENST00000563239 NLRP14Q86W24 1093 aa8.8□□□□□ -1
UBR1-204ENST00000563239 CNGA4Q8IV77 575 aa8.8□□□□□ -1
UBR1-204ENST00000563239 CHPFQ8IZ52 775 aa8.8□□□□□ -1
UBR1-204ENST00000563239 ZNF557Q8N988 423 aaPredicted RBP8.8□□□□□ -1
UBR1-204ENST00000563239 SUMF1Q8NBK3 374 aa8.8□□□□□ -1
UBR1-204ENST00000563239 MDGA1Q8NFP4 955 aa8.8□□□□□ -1
UBR1-204ENST00000563239 TSTD1Q8NFU3 115 aa8.8□□□□□ -1
UBR1-204ENST00000563239 ERLEC1Q96DZ1 483 aa8.8□□□□□ -1
UBR1-204ENST00000563239 TRIM11Q96F44 468 aa8.8□□□□□ -1
UBR1-204ENST00000563239 PEBP4Q96S96 227 aa8.8□□□□□ -1
UBR1-204ENST00000563239 PSMB7Q99436 277 aa8.8□□□□□ -1
UBR1-204ENST00000563239 FEM1AQ9BSK4 669 aa8.8□□□□□ -1
UBR1-204ENST00000563239 CIPCQ9C0C6 399 aa8.8□□□□□ -1
UBR1-204ENST00000563239 TMEM245Q9H330 911 aa8.8□□□□□ -1
UBR1-204ENST00000563239 NHEJ1Q9H9Q4 299 aaPredicted RBP8.8□□□□□ -1
UBR1-204ENST00000563239 KIAA1522Q9P206 1035 aaPredicted RBP8.8□□□□□ -1
UBR1-204ENST00000563239 PPARGC1AQ9UBK2 798 aaKnown RBP8.8□□□□□ -1
UBR1-204ENST00000563239 OR12D3Q9UGF7 316 aa8.8□□□□□ -1
UBR1-204ENST00000563239 FZD10Q9ULW2 581 aa8.8□□□□□ -1
UBR1-204ENST00000563239 MYO18AQ92614 2054 aaKnown RBP8.8□□□□□ -1
UBR1-204ENST00000563239 GPR179Q6PRD1 2367 aa8.79□□□□□ -1
UBR1-204ENST00000563239 EML5Q05BV3 1969 aa8.79□□□□□ -1
UBR1-204ENST00000563239 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.79□□□□□ -1
UBR1-204ENST00000563239 TCRBV21S2A2A0A5A6 115 aa8.79□□□□□ -1
UBR1-204ENST00000563239 TYW5A2RUC4 315 aaKnown RBP8.79□□□□□ -1
UBR1-204ENST00000563239 ANKRD62A6NC57 917 aa8.79□□□□□ -1
UBR1-204ENST00000563239 NPC1O15118 1278 aa8.79□□□□□ -1
UBR1-204ENST00000563239 AXIN1O15169 862 aa8.79□□□□□ -1
UBR1-204ENST00000563239 LRCH4O75427 683 aa8.79□□□□□ -1
UBR1-204ENST00000563239 LRIG2O94898 1065 aa8.79□□□□□ -1
UBR1-204ENST00000563239 TPM1P09493 284 aa8.79□□□□□ -1
UBR1-204ENST00000563239 DLDP09622 509 aaKnown RBP8.79□□□□□ -1
UBR1-204ENST00000563239 C7P10643 843 aa8.79□□□□□ -1
UBR1-204ENST00000563239 HLA-EP13747 358 aa8.79□□□□□ -1
UBR1-204ENST00000563239 TCF4P15884 667 aa8.79□□□□□ -1
UBR1-204ENST00000563239 GABRG2P18507 467 aa8.79□□□□□ -1
UBR1-204ENST00000563239 POLR2EP19388 210 aaKnown RBP8.79□□□□□ -1
UBR1-204ENST00000563239 FECHP22830 423 aa8.79□□□□□ -1
UBR1-204ENST00000563239 IL1R2P27930 398 aa8.79□□□□□ -1
UBR1-204ENST00000563239 MIPP30301 263 aa8.79□□□□□ -1
UBR1-204ENST00000563239 NUMBP49757 651 aa8.79□□□□□ -1
UBR1-204ENST00000563239 ZNF177Q13360 481 aaPredicted RBP8.79□□□□□ -1
UBR1-204ENST00000563239 SLC12A1Q13621 1099 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms