RNA–Protein interactions for RNA: ENST00000563130.5

CNOT1-204, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 2,280 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-204ENST00000563130 MUC6Q6W4X9 2439 aa6.4□□□□□ -1.38
CNOT1-204ENST00000563130 TBC1D3BA6NDS4 549 aa6.39□□□□□ -1.39
CNOT1-204ENST00000563130 AKR1B15C9JRZ8 316 aaPredicted RBP6.39□□□□□ -1.39
CNOT1-204ENST00000563130 J3QL48 77 aa6.39□□□□□ -1.39
CNOT1-204ENST00000563130 K7ESF4 209 aa6.39□□□□□ -1.39
CNOT1-204ENST00000563130 ATG13O75143 517 aa6.39□□□□□ -1.39
CNOT1-204ENST00000563130 TPM1P09493 284 aa6.39□□□□□ -1.39
CNOT1-204ENST00000563130 GPD1P21695 349 aa6.39□□□□□ -1.39
CNOT1-204ENST00000563130 HOXA6P31267 233 aa6.39□□□□□ -1.39
CNOT1-204ENST00000563130 EIF4A3P38919 411 aaKnown RBP6.39□□□□□ -1.39
CNOT1-204ENST00000563130 CXCL12P48061 93 aa6.39□□□□□ -1.39
CNOT1-204ENST00000563130 CCR3P51677 355 aa6.39□□□□□ -1.39
CNOT1-204ENST00000563130 ATP11AP98196 1134 aa6.39□□□□□ -1.39
CNOT1-204ENST00000563130 SATB1Q01826 763 aa6.39□□□□□ -1.39
CNOT1-204ENST00000563130 KDSRQ06136 332 aa6.39□□□□□ -1.39
CNOT1-204ENST00000563130 ZNF252P-AS1Q0IIN9 211 aa6.39□□□□□ -1.39
CNOT1-204ENST00000563130 AUHQ13825 339 aaKnown RBP6.39□□□□□ -1.39
CNOT1-204ENST00000563130 SLC18A3Q16572 532 aa6.39□□□□□ -1.39
CNOT1-204ENST00000563130 GEN1Q17RS7 908 aa6.39□□□□□ -1.39
CNOT1-204ENST00000563130 ZNF528Q3MIS6 628 aa6.39□□□□□ -1.39
CNOT1-204ENST00000563130 HSF5Q4G112 596 aaPredicted RBP6.39□□□□□ -1.39
CNOT1-204ENST00000563130 ACBD5Q5T8D3 534 aaPredicted RBP6.39□□□□□ -1.39
CNOT1-204ENST00000563130 EMC10Q5UCC4 262 aa6.39□□□□□ -1.39
CNOT1-204ENST00000563130 RAP1GAP2Q684P5 730 aa6.39□□□□□ -1.39
CNOT1-204ENST00000563130 TMEM215Q68D42 235 aa6.39□□□□□ -1.39
CNOT1-204ENST00000563130 SYT13Q7L8C5 426 aa6.39□□□□□ -1.39
CNOT1-204ENST00000563130 FAM131BQ86XD5 332 aa6.39□□□□□ -1.39
CNOT1-204ENST00000563130 IL17RCQ8NAC3 791 aa6.39□□□□□ -1.39
CNOT1-204ENST00000563130 HJURPQ8NCD3 748 aaPredicted RBP6.39□□□□□ -1.39
CNOT1-204ENST00000563130 RPLP0P6Q8NHW5 317 aa6.39□□□□□ -1.39
CNOT1-204ENST00000563130 FIBINQ8TAL6 211 aa6.39□□□□□ -1.39
CNOT1-204ENST00000563130 WFDC5Q8TCV5 224 aa6.39□□□□□ -1.39
CNOT1-204ENST00000563130 TRIM11Q96F44 468 aa6.39□□□□□ -1.39
CNOT1-204ENST00000563130 HAPLN3Q96S86 360 aa6.39□□□□□ -1.39
CNOT1-204ENST00000563130 SPATA6Q9NWH7 488 aaPredicted RBP6.39□□□□□ -1.39
CNOT1-204ENST00000563130 CNOT8Q9UFF9 292 aaKnown RBP6.39□□□□□ -1.39
CNOT1-204ENST00000563130 RAPGEFL1Q9UHV5 662 aa6.39□□□□□ -1.39
CNOT1-204ENST00000563130 USP34Q70CQ2 3546 aa6.39□□□□□ -1.39
CNOT1-204ENST00000563130 MYO15AQ9UKN7 3530 aa6.39□□□□□ -1.39
CNOT1-204ENST00000563130 DMDP11532 3685 aa6.39□□□□□ -1.39
CNOT1-204ENST00000563130 IGLV3-10A0A075B6K4 115 aa6.39□□□□□ -1.39
CNOT1-204ENST00000563130 F5H5T6 163 aa6.39□□□□□ -1.39
CNOT1-204ENST00000563130 CCP110O43303 1012 aa6.39□□□□□ -1.39
CNOT1-204ENST00000563130 LAMTOR5O43504 91 aa6.39□□□□□ -1.39
CNOT1-204ENST00000563130 TBL1XO60907 577 aa6.39□□□□□ -1.39
CNOT1-204ENST00000563130 HNRNPLP14866 589 aaKnown RBP eCLIP6.39□□□□□ -1.39
CNOT1-204ENST00000563130 ADRA1BP35368 520 aa6.39□□□□□ -1.39
CNOT1-204ENST00000563130 GFPT1Q06210 699 aaPredicted RBP6.39□□□□□ -1.39
CNOT1-204ENST00000563130 SCAPQ12770 1279 aa6.39□□□□□ -1.39
CNOT1-204ENST00000563130 ENPP2Q13822 863 aa6.39□□□□□ -1.39
CNOT1-204ENST00000563130 EIF4HQ15056 248 aaKnown RBP6.39□□□□□ -1.39
CNOT1-204ENST00000563130 CDO1Q16878 200 aa6.39□□□□□ -1.39
CNOT1-204ENST00000563130 C2orf27AQ580R0 203 aa6.39□□□□□ -1.39
CNOT1-204ENST00000563130 C10orf76Q5T2E6 689 aa6.39□□□□□ -1.39
CNOT1-204ENST00000563130 DCUN1D2Q6PH85 259 aa6.39□□□□□ -1.39
CNOT1-204ENST00000563130 SND1Q7KZF4 910 aaKnown RBP eCLIP6.39□□□□□ -1.39
CNOT1-204ENST00000563130 ADIPOR2Q86V24 386 aa6.39□□□□□ -1.39
CNOT1-204ENST00000563130 CHSY1Q86X52 802 aa6.39□□□□□ -1.39
CNOT1-204ENST00000563130 LGI2Q8N0V4 545 aa6.39□□□□□ -1.39
CNOT1-204ENST00000563130 ARFGAP1Q8N6T3 406 aa6.39□□□□□ -1.39
CNOT1-204ENST00000563130 ZNF557Q8N988 423 aaPredicted RBP6.39□□□□□ -1.39
CNOT1-204ENST00000563130 FAM172AQ8WUF8 416 aa6.39□□□□□ -1.39
CNOT1-204ENST00000563130 RNF34Q969K3 372 aa6.39□□□□□ -1.39
CNOT1-204ENST00000563130 IGSF8Q969P0 613 aa6.39□□□□□ -1.39
CNOT1-204ENST00000563130 NTAN1Q96AB6 310 aa6.39□□□□□ -1.39
CNOT1-204ENST00000563130 ZNF653Q96CK0 615 aa6.39□□□□□ -1.39
CNOT1-204ENST00000563130 CNPY3Q9BT09 278 aa6.39□□□□□ -1.39
CNOT1-204ENST00000563130 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.39□□□□□ -1.39
CNOT1-204ENST00000563130 THAP2Q9H0W7 228 aa6.39□□□□□ -1.39
CNOT1-204ENST00000563130 TMPRSS4Q9NRS4 437 aa6.39□□□□□ -1.39
CNOT1-204ENST00000563130 CDV3Q9UKY7 258 aaKnown RBP6.39□□□□□ -1.39
CNOT1-204ENST00000563130 MMP17Q9ULZ9 603 aa6.39□□□□□ -1.39
CNOT1-204ENST00000563130 A0A1B0GVM2 712 aa6.38□□□□□ -1.39
CNOT1-204ENST00000563130 ANKRD62A6NC57 917 aa6.38□□□□□ -1.39
CNOT1-204ENST00000563130 TCAF2A6NFQ2 919 aa6.38□□□□□ -1.39
CNOT1-204ENST00000563130 DRGXA6NNA5 263 aa6.38□□□□□ -1.39
CNOT1-204ENST00000563130 H0Y858 1186 aa6.38□□□□□ -1.39
CNOT1-204ENST00000563130 ADAM23O75077 832 aa6.38□□□□□ -1.39
CNOT1-204ENST00000563130 LUC7L3O95232 432 aaKnown RBP6.38□□□□□ -1.39
CNOT1-204ENST00000563130 CYP1A2P05177 515 aa6.38□□□□□ -1.39
CNOT1-204ENST00000563130 SP9P0CG40 484 aa6.38□□□□□ -1.39
CNOT1-204ENST00000563130 HOXC13P31276 330 aa6.38□□□□□ -1.39
CNOT1-204ENST00000563130 CD70P32970 193 aa6.38□□□□□ -1.39
CNOT1-204ENST00000563130 IRAK1P51617 712 aa6.38□□□□□ -1.39
CNOT1-204ENST00000563130 GALCP54803 685 aa6.38□□□□□ -1.39
CNOT1-204ENST00000563130 NRG1Q02297 640 aaPredicted RBP6.38□□□□□ -1.39
CNOT1-204ENST00000563130 CRY1Q16526 586 aa6.38□□□□□ -1.39
CNOT1-204ENST00000563130 FSCBQ5H9T9 825 aa6.38□□□□□ -1.39
CNOT1-204ENST00000563130 CCDC122Q5T0U0 273 aa6.38□□□□□ -1.39
CNOT1-204ENST00000563130 MANEALQ5VSG8 457 aa6.38□□□□□ -1.39
CNOT1-204ENST00000563130 TTC39BQ5VTQ0 682 aaPredicted RBP6.38□□□□□ -1.39
CNOT1-204ENST00000563130 ANKS1BQ7Z6G8 1248 aa6.38□□□□□ -1.39
CNOT1-204ENST00000563130 C14orf80Q86SX3 495 aa6.38□□□□□ -1.39
CNOT1-204ENST00000563130 MFN1Q8IWA4 741 aa6.38□□□□□ -1.39
CNOT1-204ENST00000563130 CFAP52Q8N1V2 620 aa6.38□□□□□ -1.39
CNOT1-204ENST00000563130 ZNF513Q8N8E2 541 aaPredicted RBP6.38□□□□□ -1.39
CNOT1-204ENST00000563130 ZBTB44Q8NCP5 570 aa6.38□□□□□ -1.39
CNOT1-204ENST00000563130 ACDQ96AP0 544 aa6.38□□□□□ -1.39
CNOT1-204ENST00000563130 FAM126AQ9BYI3 521 aaPredicted RBP6.38□□□□□ -1.39
CNOT1-204ENST00000563130 TRIM7Q9C029 511 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms