RNA–Protein interactions for RNA: ENST00000562610.5

COMMD4-206, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-206ENST00000562610 ASLP04424 464 aa16.63■□□□□ 0.25
COMMD4-206ENST00000562610 RRM1P23921 792 aa16.63■□□□□ 0.25
COMMD4-206ENST00000562610 P2RY2P41231 377 aa16.63■□□□□ 0.25
COMMD4-206ENST00000562610 PTPN9P43378 593 aa16.63■□□□□ 0.25
COMMD4-206ENST00000562610 ST8SIA6P61647 398 aa16.63■□□□□ 0.25
COMMD4-206ENST00000562610 BYSLQ13895 437 aaKnown RBP16.63■□□□□ 0.25
COMMD4-206ENST00000562610 PTPRNQ16849 979 aa16.63■□□□□ 0.25
COMMD4-206ENST00000562610 PLEKHG6Q3KR16 790 aa16.63■□□□□ 0.25
COMMD4-206ENST00000562610 RAB6CQ53S08 254 aa16.63■□□□□ 0.25
COMMD4-206ENST00000562610 SH3PXD2AQ5TCZ1 1133 aa16.63■□□□□ 0.25
COMMD4-206ENST00000562610 RNF219Q5W0B1 726 aaPredicted RBP16.63■□□□□ 0.25
COMMD4-206ENST00000562610 DCUN1D2Q6PH85 259 aa16.63■□□□□ 0.25
COMMD4-206ENST00000562610 LRRC31Q6UY01 552 aa16.63■□□□□ 0.25
COMMD4-206ENST00000562610 BNIPLQ7Z465 357 aa16.63■□□□□ 0.25
COMMD4-206ENST00000562610 FRMD1Q8N878 549 aa16.63■□□□□ 0.25
COMMD4-206ENST00000562610 FAM172AQ8WUF8 416 aa16.63■□□□□ 0.25
COMMD4-206ENST00000562610 ZC3H10Q96K80 434 aaKnown RBP16.63■□□□□ 0.25
COMMD4-206ENST00000562610 MRGPRX1Q96LB2 322 aa16.63■□□□□ 0.25
COMMD4-206ENST00000562610 RAB6CQ9H0N0 254 aa16.63■□□□□ 0.25
COMMD4-206ENST00000562610 PRDM16Q9HAZ2 1276 aa16.63■□□□□ 0.25
COMMD4-206ENST00000562610 CYP8B1Q9UNU6 501 aa16.63■□□□□ 0.25
COMMD4-206ENST00000562610 PTPRZ1P23471 2315 aaPredicted RBP16.62■□□□□ 0.25
COMMD4-206ENST00000562610 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.62■□□□□ 0.25
COMMD4-206ENST00000562610 SIGLEC16A6NMB1 481 aa16.62■□□□□ 0.25
COMMD4-206ENST00000562610 E9PAM4 449 aa16.62■□□□□ 0.25
COMMD4-206ENST00000562610 CCP110O43303 1012 aa16.62■□□□□ 0.25
COMMD4-206ENST00000562610 EPN2O95208 641 aa16.62■□□□□ 0.25
COMMD4-206ENST00000562610 GYPCP04921 128 aa16.62■□□□□ 0.25
COMMD4-206ENST00000562610 DESP17661 470 aa16.62■□□□□ 0.25
COMMD4-206ENST00000562610 ZBED6P86452 979 aa16.62■□□□□ 0.25
COMMD4-206ENST00000562610 ZNF177Q13360 481 aaPredicted RBP16.62■□□□□ 0.25
COMMD4-206ENST00000562610 ARL13BQ3SXY8 428 aa16.62■□□□□ 0.25
COMMD4-206ENST00000562610 PMS2CLQ68D20 193 aa16.62■□□□□ 0.25
COMMD4-206ENST00000562610 WDR59Q6PJI9 974 aa16.62■□□□□ 0.25
COMMD4-206ENST00000562610 STRADAQ7RTN6 431 aa16.62■□□□□ 0.25
COMMD4-206ENST00000562610 DNAAF5Q86Y56 855 aa16.62■□□□□ 0.25
COMMD4-206ENST00000562610 APCDD1Q8J025 514 aa16.62■□□□□ 0.25
COMMD4-206ENST00000562610 TTC17Q96AE7 1141 aa16.62■□□□□ 0.25
COMMD4-206ENST00000562610 LOXL4Q96JB6 756 aa16.62■□□□□ 0.25
COMMD4-206ENST00000562610 MKRN2Q9H000 416 aaKnown RBP16.62■□□□□ 0.25
COMMD4-206ENST00000562610 ARRDC1-AS1Q9H2J1 176 aa16.62■□□□□ 0.25
COMMD4-206ENST00000562610 TMEM245Q9H330 911 aa16.62■□□□□ 0.25
COMMD4-206ENST00000562610 LUC7L2Q9Y383 392 aaKnown RBP16.62■□□□□ 0.25
COMMD4-206ENST00000562610 GVINP1Q7Z2Y8 2422 aa16.62■□□□□ 0.25
COMMD4-206ENST00000562610 ITIH6Q6UXX5 1313 aa16.62■□□□□ 0.25
COMMD4-206ENST00000562610 CHD5Q8TDI0 1954 aa16.62■□□□□ 0.25
COMMD4-206ENST00000562610 SRGAP2O75044 1071 aa16.61■□□□□ 0.25
COMMD4-206ENST00000562610 ZNF217O75362 1048 aa16.61■□□□□ 0.25
COMMD4-206ENST00000562610 CLDN11O75508 207 aa16.61■□□□□ 0.25
COMMD4-206ENST00000562610 CNTN5O94779 1100 aa16.61■□□□□ 0.25
COMMD4-206ENST00000562610 ENDOD1O94919 500 aa16.61■□□□□ 0.25
COMMD4-206ENST00000562610 MZF1P28698 734 aaPredicted RBP16.61■□□□□ 0.25
COMMD4-206ENST00000562610 CTSOP43234 321 aaPredicted RBP16.61■□□□□ 0.25
COMMD4-206ENST00000562610 DHPSP49366 369 aaPredicted RBP16.61■□□□□ 0.25
COMMD4-206ENST00000562610 CDH4P55283 916 aa16.61■□□□□ 0.25
COMMD4-206ENST00000562610 OXCT1P55809 520 aa16.61■□□□□ 0.25
COMMD4-206ENST00000562610 RPL7AP62424 266 aaKnown RBP16.61■□□□□ 0.25
COMMD4-206ENST00000562610 CREB5Q02930 508 aa16.61■□□□□ 0.25
COMMD4-206ENST00000562610 SLC12A1Q13621 1099 aa16.61■□□□□ 0.25
COMMD4-206ENST00000562610 CCDC6Q16204 474 aa16.61■□□□□ 0.25
COMMD4-206ENST00000562610 MAP7D1Q3KQU3 841 aa16.61■□□□□ 0.25
COMMD4-206ENST00000562610 ACBD5Q5T8D3 534 aaPredicted RBP16.61■□□□□ 0.25
COMMD4-206ENST00000562610 CXorf57Q6NSI4 855 aaKnown RBP16.61■□□□□ 0.25
COMMD4-206ENST00000562610 ARMCX6Q7L4S7 300 aa16.61■□□□□ 0.25
COMMD4-206ENST00000562610 VPS36Q86VN1 386 aa16.61■□□□□ 0.25
COMMD4-206ENST00000562610 PRCCQ92733 491 aaPredicted RBP16.61■□□□□ 0.25
COMMD4-206ENST00000562610 ZNF653Q96CK0 615 aa16.61■□□□□ 0.25
COMMD4-206ENST00000562610 VCPIP1Q96JH7 1222 aa16.61■□□□□ 0.25
COMMD4-206ENST00000562610 HAPLN3Q96S86 360 aa16.61■□□□□ 0.25
COMMD4-206ENST00000562610 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.61■□□□□ 0.25
COMMD4-206ENST00000562610 MUC3BQ9H195 1237 aa16.61■□□□□ 0.25
COMMD4-206ENST00000562610 PARD6AQ9NPB6 346 aa16.61■□□□□ 0.25
COMMD4-206ENST00000562610 CD93Q9NPY3 652 aa16.61■□□□□ 0.25
COMMD4-206ENST00000562610 MBD1Q9UIS9 605 aaPredicted RBP16.61■□□□□ 0.25
COMMD4-206ENST00000562610 CAPN11Q9UMQ6 739 aa16.61■□□□□ 0.25
COMMD4-206ENST00000562610 ERVW-1Q9UQF0 538 aa16.61■□□□□ 0.25
COMMD4-206ENST00000562610 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.61■□□□□ 0.25
COMMD4-206ENST00000562610 ADAMTS9Q9P2N4 1935 aa16.6■□□□□ 0.25
COMMD4-206ENST00000562610 TCRBV5S1A1TA0A578 114 aa16.6■□□□□ 0.25
COMMD4-206ENST00000562610 DDX3XO00571 662 aaKnown RBP eCLIP16.6■□□□□ 0.253e-7■■□□□ 12.4
COMMD4-206ENST00000562610 RHOCP08134 193 aa16.6■□□□□ 0.25
COMMD4-206ENST00000562610 SRPRAP08240 638 aaKnown RBP16.6■□□□□ 0.25
COMMD4-206ENST00000562610 ACADMP11310 421 aa16.6■□□□□ 0.25
COMMD4-206ENST00000562610 CASP14P31944 242 aa16.6■□□□□ 0.25
COMMD4-206ENST00000562610 STK19P49842 368 aaPredicted RBP16.6■□□□□ 0.25
COMMD4-206ENST00000562610 ZNF143P52747 638 aaPredicted RBP16.6■□□□□ 0.25
COMMD4-206ENST00000562610 COPAP53621 1224 aa16.6■□□□□ 0.25
COMMD4-206ENST00000562610 HDAC4P56524 1084 aa16.6■□□□□ 0.25
COMMD4-206ENST00000562610 ECT2LQ008S8 904 aa16.6■□□□□ 0.25
COMMD4-206ENST00000562610 RPL6Q02878 288 aaKnown RBP16.6■□□□□ 0.25
COMMD4-206ENST00000562610 CAMK2GQ13555 558 aaPredicted RBP16.6■□□□□ 0.25
COMMD4-206ENST00000562610 C5orf22Q49AR2 442 aa16.6■□□□□ 0.25
COMMD4-206ENST00000562610 ALFQ53S48 1182 aa16.6■□□□□ 0.25
COMMD4-206ENST00000562610 LPCAT2Q7L5N7 544 aa16.6■□□□□ 0.25
COMMD4-206ENST00000562610 TFAP2DQ7Z6R9 452 aa16.6■□□□□ 0.25
COMMD4-206ENST00000562610 TMPRSS6Q8IU80 811 aa16.6■□□□□ 0.25
COMMD4-206ENST00000562610 GPR161Q8N6U8 529 aaKnown RBP16.6■□□□□ 0.25
COMMD4-206ENST00000562610 CCDC185Q8N715 623 aa16.6■□□□□ 0.25
COMMD4-206ENST00000562610 OR2T3Q8NH03 318 aa16.6■□□□□ 0.25
COMMD4-206ENST00000562610 SYN2Q92777 582 aaPredicted RBP16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms