RNA–Protein interactions for RNA: ENST00000562357.5

CMTM3-204, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 4

Gene CMTM3, Length 792 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-204ENST00000562357 ZNF18P17022 549 aa18.39■□□□□ 0.53
CMTM3-204ENST00000562357 JAM2P57087 298 aa18.39■□□□□ 0.53
CMTM3-204ENST00000562357 ECT2LQ008S8 904 aa18.39■□□□□ 0.53
CMTM3-204ENST00000562357 SULT2A1Q06520 285 aa18.39■□□□□ 0.53
CMTM3-204ENST00000562357 ZNF177Q13360 481 aaPredicted RBP18.39■□□□□ 0.53
CMTM3-204ENST00000562357 AUHQ13825 339 aaKnown RBP18.39■□□□□ 0.53
CMTM3-204ENST00000562357 SLC25A52Q3SY17 297 aa18.39■□□□□ 0.53
CMTM3-204ENST00000562357 FILIP1LQ4L180 1135 aa18.39■□□□□ 0.53
CMTM3-204ENST00000562357 FSCBQ5H9T9 825 aa18.39■□□□□ 0.53
CMTM3-204ENST00000562357 ACBD5Q5T8D3 534 aaPredicted RBP18.39■□□□□ 0.53
CMTM3-204ENST00000562357 PEAR1Q5VY43 1037 aaPredicted RBP18.39■□□□□ 0.53
CMTM3-204ENST00000562357 ZNF776Q68DI1 518 aaPredicted RBP18.39■□□□□ 0.53
CMTM3-204ENST00000562357 FBXL22Q6P050 247 aa18.39■□□□□ 0.53
CMTM3-204ENST00000562357 SLC23A3Q6PIS1 610 aa18.39■□□□□ 0.53
CMTM3-204ENST00000562357 LRRC31Q6UY01 552 aa18.39■□□□□ 0.53
CMTM3-204ENST00000562357 MMS22LQ6ZRQ5 1243 aa18.39■□□□□ 0.53
CMTM3-204ENST00000562357 CADM4Q8NFZ8 388 aa18.39■□□□□ 0.53
CMTM3-204ENST00000562357 SLC20A1Q8WUM9 679 aa18.39■□□□□ 0.53
CMTM3-204ENST00000562357 ZNF419Q96HQ0 510 aaPredicted RBP18.39■□□□□ 0.53
CMTM3-204ENST00000562357 LMLNQ96KR4 655 aa18.39■□□□□ 0.53
CMTM3-204ENST00000562357 ERGIC2Q96RQ1 377 aa18.39■□□□□ 0.53
CMTM3-204ENST00000562357 GPR174Q9BXC1 333 aa18.39■□□□□ 0.53
CMTM3-204ENST00000562357 TKTL2Q9H0I9 626 aa18.39■□□□□ 0.53
CMTM3-204ENST00000562357 SIK2Q9H0K1 926 aa18.39■□□□□ 0.53
CMTM3-204ENST00000562357 CD93Q9NPY3 652 aa18.39■□□□□ 0.53
CMTM3-204ENST00000562357 PRSS16Q9NQE7 514 aa18.39■□□□□ 0.53
CMTM3-204ENST00000562357 PIGVQ9NUD9 493 aa18.39■□□□□ 0.53
CMTM3-204ENST00000562357 TMEM74BQ9NUR3 256 aa18.39■□□□□ 0.53
CMTM3-204ENST00000562357 WSB2Q9NYS7 404 aaPredicted RBP18.39■□□□□ 0.53
CMTM3-204ENST00000562357 ERVW-1Q9UQF0 538 aa18.39■□□□□ 0.53
CMTM3-204ENST00000562357 C4orf47A7E2U8 309 aa18.38■□□□□ 0.53
CMTM3-204ENST00000562357 EPHB6O15197 1021 aa18.38■□□□□ 0.53
CMTM3-204ENST00000562357 IGLV3-19P01714 112 aa18.38■□□□□ 0.53
CMTM3-204ENST00000562357 PDGFRAP16234 1089 aa18.38■□□□□ 0.53
CMTM3-204ENST00000562357 NSFP46459 744 aaKnown RBP18.38■□□□□ 0.53
CMTM3-204ENST00000562357 CXCR3P49682 368 aa18.38■□□□□ 0.53
CMTM3-204ENST00000562357 NCAPHQ15003 741 aa18.38■□□□□ 0.53
CMTM3-204ENST00000562357 HNRNPA1L2Q32P51 320 aaKnown RBP18.38■□□□□ 0.53
CMTM3-204ENST00000562357 FAM124AQ86V42 546 aa18.38■□□□□ 0.53
CMTM3-204ENST00000562357 CIR1Q86X95 450 aaPredicted RBP18.38■□□□□ 0.53
CMTM3-204ENST00000562357 SLC41A1Q8IVJ1 513 aa18.38■□□□□ 0.53
CMTM3-204ENST00000562357 GANCQ8TET4 914 aa18.38■□□□□ 0.53
CMTM3-204ENST00000562357 PGAP3Q96FM1 320 aaPredicted RBP18.38■□□□□ 0.53
CMTM3-204ENST00000562357 BPIFA3Q9BQP9 254 aa18.38■□□□□ 0.53
CMTM3-204ENST00000562357 PCED1AQ9H1Q7 454 aa18.38■□□□□ 0.53
CMTM3-204ENST00000562357 SEPT11Q9NVA2 429 aaKnown RBP18.38■□□□□ 0.53
CMTM3-204ENST00000562357 INTS6Q9UL03 887 aaKnown RBP18.38■□□□□ 0.53
CMTM3-204ENST00000562357 NCKAP1Q9Y2A7 1128 aa18.38■□□□□ 0.53
CMTM3-204ENST00000562357 HS3ST4Q9Y661 456 aa18.38■□□□□ 0.53
CMTM3-204ENST00000562357 CLDN11O75508 207 aa18.37■□□□□ 0.53
CMTM3-204ENST00000562357 SYPP08247 313 aa18.37■□□□□ 0.53
CMTM3-204ENST00000562357 SERPINF2P08697 491 aa18.37■□□□□ 0.53
CMTM3-204ENST00000562357 ENGP17813 658 aa18.37■□□□□ 0.53
CMTM3-204ENST00000562357 RDXP35241 583 aaKnown RBP18.37■□□□□ 0.53
CMTM3-204ENST00000562357 MAPK8P45983 427 aa18.37■□□□□ 0.53
CMTM3-204ENST00000562357 FMO1Q01740 532 aa18.37■□□□□ 0.53
CMTM3-204ENST00000562357 CENPCQ03188 943 aa18.37■□□□□ 0.53
CMTM3-204ENST00000562357 UAP1L1Q3KQV9 507 aa18.37■□□□□ 0.53
CMTM3-204ENST00000562357 C2CD6Q53TS8 623 aa18.37■□□□□ 0.53
CMTM3-204ENST00000562357 ARCQ7LC44 396 aa18.37■□□□□ 0.53
CMTM3-204ENST00000562357 TBCBQ99426 244 aa18.37■□□□□ 0.53
CMTM3-204ENST00000562357 C11orf70Q9BRQ4 267 aa18.37■□□□□ 0.53
CMTM3-204ENST00000562357 GTPBP2Q9BX10 602 aaKnown RBP18.37■□□□□ 0.53
CMTM3-204ENST00000562357 METTL5Q9NRN9 209 aaKnown RBP18.37■□□□□ 0.53
CMTM3-204ENST00000562357 ARHGEF38Q9NXL2 777 aa18.37■□□□□ 0.53
CMTM3-204ENST00000562357 SLC25A13Q9UJS0 675 aa18.37■□□□□ 0.53
CMTM3-204ENST00000562357 SCML1Q9UN30 329 aa18.37■□□□□ 0.53
CMTM3-204ENST00000562357 DCHS1Q96JQ0 3298 aa18.37■□□□□ 0.53
CMTM3-204ENST00000562357 NUP205Q92621 2012 aa18.37■□□□□ 0.53
CMTM3-204ENST00000562357 EDDM13A0A1B0GTR0 161 aa18.36■□□□□ 0.53
CMTM3-204ENST00000562357 TARSL2A2RTX5 802 aaKnown RBP18.36■□□□□ 0.53
CMTM3-204ENST00000562357 SIN3BO75182 1162 aa18.36■□□□□ 0.53
CMTM3-204ENST00000562357 CYP1A1P04798 512 aaPredicted RBP18.36■□□□□ 0.53
CMTM3-204ENST00000562357 MMP8P22894 467 aa18.36■□□□□ 0.53
CMTM3-204ENST00000562357 FLT3P36888 993 aa18.36■□□□□ 0.53
CMTM3-204ENST00000562357 GGCXP38435 758 aa18.36■□□□□ 0.53
CMTM3-204ENST00000562357 CDH4P55283 916 aa18.36■□□□□ 0.53
CMTM3-204ENST00000562357 RPS14P62263 151 aaKnown RBP18.36■□□□□ 0.53
CMTM3-204ENST00000562357 CKAP5Q14008 2032 aa18.36■□□□□ 0.53
CMTM3-204ENST00000562357 ARID5BQ14865 1188 aa18.36■□□□□ 0.53
CMTM3-204ENST00000562357 OTUD1Q5VV17 481 aaPredicted RBP18.36■□□□□ 0.53
CMTM3-204ENST00000562357 DHX40Q8IX18 779 aaKnown RBP18.36■□□□□ 0.53
CMTM3-204ENST00000562357 APCDD1Q8J025 514 aa18.36■□□□□ 0.53
CMTM3-204ENST00000562357 HDDC3Q8N4P3 179 aa18.36■□□□□ 0.53
CMTM3-204ENST00000562357 IGSF8Q969P0 613 aa18.36■□□□□ 0.53
CMTM3-204ENST00000562357 NT5C3BQ969T7 300 aa18.36■□□□□ 0.53
CMTM3-204ENST00000562357 BTBD1Q9H0C5 482 aa18.36■□□□□ 0.53
CMTM3-204ENST00000562357 MUC3BQ9H195 1237 aa18.36■□□□□ 0.53
CMTM3-204ENST00000562357 MIR1-1HGQ9H1L0 117 aa18.36■□□□□ 0.53
CMTM3-204ENST00000562357 RSPH9Q9H1X1 276 aaPredicted RBP18.36■□□□□ 0.53
CMTM3-204ENST00000562357 VPS28Q9UK41 221 aa18.36■□□□□ 0.53
CMTM3-204ENST00000562357 ADCY5O95622 1261 aa18.35■□□□□ 0.53
CMTM3-204ENST00000562357 ATP1A3P13637 1013 aa18.35■□□□□ 0.53
CMTM3-204ENST00000562357 SDC4P31431 198 aa18.35■□□□□ 0.53
CMTM3-204ENST00000562357 ZNF165P49910 485 aa18.35■□□□□ 0.53
CMTM3-204ENST00000562357 TPM4P67936 248 aa18.35■□□□□ 0.53
CMTM3-204ENST00000562357 DCAF12L1Q5VU92 463 aa18.35■□□□□ 0.53
CMTM3-204ENST00000562357 SNX19Q92543 992 aa18.35■□□□□ 0.53
CMTM3-204ENST00000562357 MYO19Q96H55 970 aa18.35■□□□□ 0.53
CMTM3-204ENST00000562357 MRGPRX3Q96LB0 322 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms