RNA–Protein interactions for RNA: ENST00000561817.5

CAPN3-210, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-210ENST00000561817 DSG1Q02413 1049 aa6.74□□□□□ -1.33
CAPN3-210ENST00000561817 GAD2Q05329 585 aa6.74□□□□□ -1.33
CAPN3-210ENST00000561817 SMARCB1Q12824 385 aa6.74□□□□□ -1.33
CAPN3-210ENST00000561817 CALCOCO2Q13137 446 aa6.74□□□□□ -1.33
CAPN3-210ENST00000561817 NME3Q13232 169 aa6.74□□□□□ -1.33
CAPN3-210ENST00000561817 PPIGQ13427 754 aaKnown RBP eCLIP6.74□□□□□ -1.33
CAPN3-210ENST00000561817 SLC29A2Q14542 456 aa6.74□□□□□ -1.33
CAPN3-210ENST00000561817 KCNJ11Q14654 390 aa6.74□□□□□ -1.33
CAPN3-210ENST00000561817 SLMAPQ14BN4 828 aa6.74□□□□□ -1.33
CAPN3-210ENST00000561817 PRKD1Q15139 912 aaPredicted RBP6.74□□□□□ -1.33
CAPN3-210ENST00000561817 SLC45A4Q5BKX6 768 aa6.74□□□□□ -1.33
CAPN3-210ENST00000561817 EFHC2Q5JST6 749 aa6.74□□□□□ -1.33
CAPN3-210ENST00000561817 FAM182AQ5T1J6 154 aa6.74□□□□□ -1.33
CAPN3-210ENST00000561817 DARS2Q6PI48 645 aaKnown RBP6.74□□□□□ -1.33
CAPN3-210ENST00000561817 KCNT2Q6UVM3 1135 aa6.74□□□□□ -1.33
CAPN3-210ENST00000561817 RFX8Q6ZV50 586 aa6.74□□□□□ -1.33
CAPN3-210ENST00000561817 ANKS3Q6ZW76 656 aa6.74□□□□□ -1.33
CAPN3-210ENST00000561817 GSTA5Q7RTV2 222 aa6.74□□□□□ -1.33
CAPN3-210ENST00000561817 TMCO2Q7Z6W1 182 aaPredicted RBP6.74□□□□□ -1.33
CAPN3-210ENST00000561817 HOOK3Q86VS8 718 aa6.74□□□□□ -1.33
CAPN3-210ENST00000561817 MON1AQ86VX9 555 aa6.74□□□□□ -1.33
CAPN3-210ENST00000561817 CEP57Q86XR8 500 aa6.74□□□□□ -1.33
CAPN3-210ENST00000561817 SCN4BQ8IWT1 228 aa6.74□□□□□ -1.33
CAPN3-210ENST00000561817 TP53INP2Q8IXH6 220 aa6.74□□□□□ -1.33
CAPN3-210ENST00000561817 CMTR2Q8IYT2 770 aaKnown RBP6.74□□□□□ -1.33
CAPN3-210ENST00000561817 ZNF683Q8IZ20 524 aa6.74□□□□□ -1.33
CAPN3-210ENST00000561817 ZSCAN18Q8TBC5 510 aaPredicted RBP6.74□□□□□ -1.33
CAPN3-210ENST00000561817 SPPL2BQ8TCT7 592 aa6.74□□□□□ -1.33
CAPN3-210ENST00000561817 C2orf15Q8WU43 125 aaKnown RBP6.74□□□□□ -1.33
CAPN3-210ENST00000561817 CASP10Q92851 521 aa6.74□□□□□ -1.33
CAPN3-210ENST00000561817 PGLYRP2Q96PD5 576 aa6.74□□□□□ -1.33
CAPN3-210ENST00000561817 CLSTN3Q9BQT9 956 aa6.74□□□□□ -1.33
CAPN3-210ENST00000561817 TRIM62Q9BVG3 475 aa6.74□□□□□ -1.33
CAPN3-210ENST00000561817 HERC2P3Q9BVR0 1158 aa6.74□□□□□ -1.33
CAPN3-210ENST00000561817 TTLL2Q9BWV7 592 aa6.74□□□□□ -1.33
CAPN3-210ENST00000561817 COL25A1Q9BXS0 654 aaPredicted RBP6.74□□□□□ -1.33
CAPN3-210ENST00000561817 MAK16Q9BXY0 300 aaKnown RBP6.74□□□□□ -1.33
CAPN3-210ENST00000561817 PHACTR1Q9C0D0 580 aa6.74□□□□□ -1.33
CAPN3-210ENST00000561817 CDC42EP4Q9H3Q1 356 aaKnown RBP6.74□□□□□ -1.33
CAPN3-210ENST00000561817 FAM204AQ9H8W3 233 aa6.74□□□□□ -1.33
CAPN3-210ENST00000561817 ABCC13Q9NSE7 274 aa6.74□□□□□ -1.33
CAPN3-210ENST00000561817 COMMD8Q9NX08 183 aa6.74□□□□□ -1.33
CAPN3-210ENST00000561817 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.74□□□□□ -1.33
CAPN3-210ENST00000561817 NINJ2Q9NZG7 142 aa6.74□□□□□ -1.33
CAPN3-210ENST00000561817 GMIPQ9P107 970 aa6.74□□□□□ -1.33
CAPN3-210ENST00000561817 PRKAB1Q9Y478 270 aa6.74□□□□□ -1.33
CAPN3-210ENST00000561817 MKI67P46013 3256 aaKnown RBP6.74□□□□□ -1.33
CAPN3-210ENST00000561817 SYNJ2BP-COX16A0A087WUM0 186 aa6.73□□□□□ -1.33
CAPN3-210ENST00000561817 C5orf60A6NFR6 353 aa6.73□□□□□ -1.33
CAPN3-210ENST00000561817 HACD1B0YJ81 288 aa6.73□□□□□ -1.33
CAPN3-210ENST00000561817 H7C0C1 242 aa6.73□□□□□ -1.33
CAPN3-210ENST00000561817 ERVH48-1M5A8F1 160 aa6.73□□□□□ -1.33
CAPN3-210ENST00000561817 EEF2KO00418 725 aaKnown RBP6.73□□□□□ -1.33
CAPN3-210ENST00000561817 CAPN9O14815 690 aa6.73□□□□□ -1.33
CAPN3-210ENST00000561817 POLR3GO15318 223 aaPredicted RBP6.73□□□□□ -1.33
CAPN3-210ENST00000561817 GCATO75600 419 aa6.73□□□□□ -1.33
CAPN3-210ENST00000561817 TCEA3O75764 348 aa6.73□□□□□ -1.33
CAPN3-210ENST00000561817 LRIG2O94898 1065 aa6.73□□□□□ -1.33
CAPN3-210ENST00000561817 ABLIM3O94929 683 aa6.73□□□□□ -1.33
CAPN3-210ENST00000561817 MAP3K6O95382 1288 aa6.73□□□□□ -1.33
CAPN3-210ENST00000561817 SEC24AO95486 1093 aa6.73□□□□□ -1.33
CAPN3-210ENST00000561817 TTC4O95801 387 aa6.73□□□□□ -1.33
CAPN3-210ENST00000561817 IFNB1P01574 187 aa6.73□□□□□ -1.33
CAPN3-210ENST00000561817 IGLV3-27P01718 113 aa6.73□□□□□ -1.33
CAPN3-210ENST00000561817 SOD2P04179 222 aa6.73□□□□□ -1.33
CAPN3-210ENST00000561817 ADH1AP07327 375 aa6.73□□□□□ -1.33
CAPN3-210ENST00000561817 ABHD2P08910 425 aa6.73□□□□□ -1.33
CAPN3-210ENST00000561817 ERCC2P18074 760 aa6.73□□□□□ -1.33
CAPN3-210ENST00000561817 ARL4AP40617 200 aa6.73□□□□□ -1.33
CAPN3-210ENST00000561817 ATP5OP48047 213 aa6.73□□□□□ -1.33
CAPN3-210ENST00000561817 GLUD2P49448 558 aa6.73□□□□□ -1.33
CAPN3-210ENST00000561817 ZNF135P52742 658 aaPredicted RBP6.73□□□□□ -1.33
CAPN3-210ENST00000561817 EIF3BP55884 814 aaKnown RBP6.73□□□□□ -1.33
CAPN3-210ENST00000561817 FAM193AP78312 1265 aa6.73□□□□□ -1.33
CAPN3-210ENST00000561817 HTRA4P83105 476 aaPredicted RBP6.73□□□□□ -1.33
CAPN3-210ENST00000561817 GABPB1Q06547 395 aaPredicted RBP6.73□□□□□ -1.33
CAPN3-210ENST00000561817 WASHC5Q12768 1159 aa6.73□□□□□ -1.33
CAPN3-210ENST00000561817 DUSP4Q13115 394 aa6.73□□□□□ -1.33
CAPN3-210ENST00000561817 GPS2Q13227 327 aa6.73□□□□□ -1.33
CAPN3-210ENST00000561817 PPP2R5DQ14738 602 aa6.73□□□□□ -1.33
CAPN3-210ENST00000561817 PSMD5Q16401 504 aa6.73□□□□□ -1.33
CAPN3-210ENST00000561817 USP41Q3LFD5 358 aa6.73□□□□□ -1.33
CAPN3-210ENST00000561817 BRMS1LQ5PSV4 323 aa6.73□□□□□ -1.33
CAPN3-210ENST00000561817 CEP85LQ5SZL2 805 aa6.73□□□□□ -1.33
CAPN3-210ENST00000561817 FNBP1LQ5T0N5 605 aa6.73□□□□□ -1.33
CAPN3-210ENST00000561817 AGBL2Q5U5Z8 902 aa6.73□□□□□ -1.33
CAPN3-210ENST00000561817 RASIP1Q5U651 963 aa6.73□□□□□ -1.33
CAPN3-210ENST00000561817 BTBD8Q5XKL5 378 aa6.73□□□□□ -1.33
CAPN3-210ENST00000561817 AFMIDQ63HM1 303 aa6.73□□□□□ -1.33
CAPN3-210ENST00000561817 ZC3H18Q86VM9 953 aaKnown RBP6.73□□□□□ -1.33
CAPN3-210ENST00000561817 CDKL3Q8IVW4 592 aaPredicted RBP6.73□□□□□ -1.33
CAPN3-210ENST00000561817 PPIL6Q8IXY8 311 aa6.73□□□□□ -1.33
CAPN3-210ENST00000561817 GPR65Q8IYL9 337 aa6.73□□□□□ -1.33
CAPN3-210ENST00000561817 RGL4Q8IZJ4 473 aa6.73□□□□□ -1.33
CAPN3-210ENST00000561817 AGGF1Q8N302 714 aaeCLIP6.73□□□□□ -1.33
CAPN3-210ENST00000561817 ZNF276Q8N554 614 aa6.73□□□□□ -1.33
CAPN3-210ENST00000561817 NPWQ8N729 165 aa6.73□□□□□ -1.33
CAPN3-210ENST00000561817 COLGALT1Q8NBJ5 622 aa6.73□□□□□ -1.33
CAPN3-210ENST00000561817 TRAF3IP1Q8TDR0 691 aaPredicted RBP6.73□□□□□ -1.33
CAPN3-210ENST00000561817 UBLCP1Q8WVY7 318 aaPredicted RBP6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms