RNA–Protein interactions for RNA: ENST00000561781.1

RAB40C-206, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 2,439 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-206ENST00000561781 DHX38Q92620 1227 aaKnown RBP19.05■□□□□ 0.64
RAB40C-206ENST00000561781 ELMO3Q96BJ8 720 aa19.05■□□□□ 0.64
RAB40C-206ENST00000561781 FKBP14Q9NWM8 211 aa19.05■□□□□ 0.64
RAB40C-206ENST00000561781 MTMR4Q9NYA4 1195 aa19.05■□□□□ 0.64
RAB40C-206ENST00000561781 ANGPTL3Q9Y5C1 460 aa19.05■□□□□ 0.64
RAB40C-206ENST00000561781 ZNF536O15090 1300 aa19.05■□□□□ 0.64
RAB40C-206ENST00000561781 LOC100653049A0A140TA62 436 aa19.04■□□□□ 0.64
RAB40C-206ENST00000561781 CYB561D2O14569 222 aa19.04■□□□□ 0.64
RAB40C-206ENST00000561781 MSI1O43347 362 aaKnown RBP19.04■□□□□ 0.64
RAB40C-206ENST00000561781 KRT34O76011 436 aa19.04■□□□□ 0.64
RAB40C-206ENST00000561781 BCL10O95999 233 aa19.04■□□□□ 0.64
RAB40C-206ENST00000561781 CCNA2P20248 432 aa19.04■□□□□ 0.64
RAB40C-206ENST00000561781 NR4A1P22736 598 aa19.04■□□□□ 0.64
RAB40C-206ENST00000561781 POLR2BP30876 1174 aaKnown RBP19.04■□□□□ 0.64
RAB40C-206ENST00000561781 EIF3EP60228 445 aaKnown RBP19.04■□□□□ 0.64
RAB40C-206ENST00000561781 IKBKEQ14164 716 aa19.04■□□□□ 0.64
RAB40C-206ENST00000561781 FSCBQ5H9T9 825 aa19.04■□□□□ 0.64
RAB40C-206ENST00000561781 DCP2Q8IU60 420 aaKnown RBP19.04■□□□□ 0.64
RAB40C-206ENST00000561781 ZSWIM2Q8NEG5 633 aa19.04■□□□□ 0.64
RAB40C-206ENST00000561781 SLC44A1Q8WWI5 657 aa19.04■□□□□ 0.64
RAB40C-206ENST00000561781 CNDP2Q96KP4 475 aaKnown RBP19.04■□□□□ 0.64
RAB40C-206ENST00000561781 TP63Q9H3D4 680 aaPredicted RBP19.04■□□□□ 0.64
RAB40C-206ENST00000561781 DDX56Q9NY93 547 aaKnown RBP19.04■□□□□ 0.64
RAB40C-206ENST00000561781 VPS28Q9UK41 221 aa19.04■□□□□ 0.64
RAB40C-206ENST00000561781 VAV3Q9UKW4 847 aa19.04■□□□□ 0.64
RAB40C-206ENST00000561781 ZBTB21Q9ULJ3 1066 aa19.04■□□□□ 0.64
RAB40C-206ENST00000561781 TRAF6Q9Y4K3 522 aa19.04■□□□□ 0.64
RAB40C-206ENST00000561781 FAM86B1E9PN63 330 aa19.04■□□□□ 0.64
RAB40C-206ENST00000561781 TBX3O15119 743 aa19.04■□□□□ 0.64
RAB40C-206ENST00000561781 IDH3BO43837 385 aa19.04■□□□□ 0.64
RAB40C-206ENST00000561781 FAM86B2P0C5J1 330 aa19.04■□□□□ 0.64
RAB40C-206ENST00000561781 UNGP13051 313 aaPredicted RBP19.04■□□□□ 0.64
RAB40C-206ENST00000561781 COX4I1P13073 169 aa19.04■□□□□ 0.64
RAB40C-206ENST00000561781 MAP4P27816 1152 aaKnown RBP19.04■□□□□ 0.64
RAB40C-206ENST00000561781 DCAF15Q66K64 600 aa19.04■□□□□ 0.64
RAB40C-206ENST00000561781 PDPK2PQ6A1A2 396 aa19.04■□□□□ 0.64
RAB40C-206ENST00000561781 TATDN1Q6P1N9 297 aa19.04■□□□□ 0.64
RAB40C-206ENST00000561781 C16orf89Q6UX73 402 aa19.04■□□□□ 0.64
RAB40C-206ENST00000561781 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.04■□□□□ 0.64
RAB40C-206ENST00000561781 SEMA4DQ92854 862 aa19.04■□□□□ 0.64
RAB40C-206ENST00000561781 SLC7A5P2Q9GIP4 190 aa19.04■□□□□ 0.64
RAB40C-206ENST00000561781 PCDH9Q9HC56 1237 aa19.04■□□□□ 0.64
RAB40C-206ENST00000561781 SNCAIPQ9Y6H5 919 aa19.04■□□□□ 0.64
RAB40C-206ENST00000561781 A8MU76 341 aa19.03■□□□□ 0.64
RAB40C-206ENST00000561781 KRT6AP02538 564 aa19.03■□□□□ 0.64
RAB40C-206ENST00000561781 KRT6BP04259 564 aa19.03■□□□□ 0.64
RAB40C-206ENST00000561781 MSL3P1P0C860 447 aa19.03■□□□□ 0.64
RAB40C-206ENST00000561781 ZNF182P17025 639 aaPredicted RBP19.03■□□□□ 0.64
RAB40C-206ENST00000561781 PEX6Q13608 980 aa19.03■□□□□ 0.64
RAB40C-206ENST00000561781 BBS9Q3SYG4 887 aa19.03■□□□□ 0.64
RAB40C-206ENST00000561781 ZFYVE27Q5T4F4 411 aa19.03■□□□□ 0.64
RAB40C-206ENST00000561781 MOXD1Q6UVY6 613 aa19.03■□□□□ 0.64
RAB40C-206ENST00000561781 TMEM26Q6ZUK4 368 aa19.03■□□□□ 0.64
RAB40C-206ENST00000561781 TAS2R42Q7RTR8 314 aa19.03■□□□□ 0.64
RAB40C-206ENST00000561781 PDCD6IPQ8WUM4 868 aaKnown RBP19.03■□□□□ 0.64
RAB40C-206ENST00000561781 P2RX7Q99572 595 aaKnown RBP19.03■□□□□ 0.64
RAB40C-206ENST00000561781 C17orf80Q9BSJ5 609 aa19.03■□□□□ 0.64
RAB40C-206ENST00000561781 DHX33Q9H6R0 707 aaKnown RBP19.03■□□□□ 0.64
RAB40C-206ENST00000561781 COQ10BQ9H8M1 238 aa19.03■□□□□ 0.64
RAB40C-206ENST00000561781 DRG1Q9Y295 367 aaKnown RBP19.03■□□□□ 0.64
RAB40C-206ENST00000561781 CLDN25C9JDP6 229 aa19.03■□□□□ 0.64
RAB40C-206ENST00000561781 NUAK1O60285 661 aa19.03■□□□□ 0.64
RAB40C-206ENST00000561781 FYNP06241 537 aa19.03■□□□□ 0.64
RAB40C-206ENST00000561781 CXCR2P25025 360 aa19.03■□□□□ 0.64
RAB40C-206ENST00000561781 CAP2P40123 477 aa19.03■□□□□ 0.64
RAB40C-206ENST00000561781 GRSF1Q12849 480 aaKnown RBP eCLIP19.03■□□□□ 0.64
RAB40C-206ENST00000561781 RAB39AQ14964 217 aa19.03■□□□□ 0.64
RAB40C-206ENST00000561781 CCDC14Q49A88 953 aa19.03■□□□□ 0.64
RAB40C-206ENST00000561781 CCDC58Q4VC31 144 aa19.03■□□□□ 0.64
RAB40C-206ENST00000561781 SLX4IPQ5VYV7 408 aa19.03■□□□□ 0.64
RAB40C-206ENST00000561781 ANKRD13BQ86YJ7 626 aa19.03■□□□□ 0.64
RAB40C-206ENST00000561781 TPH2Q8IWU9 490 aa19.03■□□□□ 0.64
RAB40C-206ENST00000561781 TAB3Q8N5C8 712 aaPredicted RBP19.03■□□□□ 0.64
RAB40C-206ENST00000561781 BHLHE22Q8NFJ8 381 aaPredicted RBP19.03■□□□□ 0.64
RAB40C-206ENST00000561781 CRYGNQ8WXF5 182 aa19.03■□□□□ 0.64
RAB40C-206ENST00000561781 CPT1BQ92523 772 aa19.03■□□□□ 0.64
RAB40C-206ENST00000561781 TMA16Q96EY4 203 aaKnown RBP19.03■□□□□ 0.64
RAB40C-206ENST00000561781 FAM172BPA6NC97 362 aa19.02■□□□□ 0.64
RAB40C-206ENST00000561781 AREL1O15033 823 aa19.02■□□□□ 0.64
RAB40C-206ENST00000561781 JRKO75564 520 aa19.02■□□□□ 0.64
RAB40C-206ENST00000561781 HPCAL1P37235 193 aa19.02■□□□□ 0.64
RAB40C-206ENST00000561781 IST1P53990 364 aa19.02■□□□□ 0.64
RAB40C-206ENST00000561781 MRPS5P82675 430 aaKnown RBP19.02■□□□□ 0.64
RAB40C-206ENST00000561781 FSTL1Q12841 308 aa19.02■□□□□ 0.64
RAB40C-206ENST00000561781 PMS2P3Q13401 168 aa19.02■□□□□ 0.64
RAB40C-206ENST00000561781 TTC39BQ5VTQ0 682 aaPredicted RBP19.02■□□□□ 0.64
RAB40C-206ENST00000561781 C16orf46Q6P387 395 aa19.02■□□□□ 0.64
RAB40C-206ENST00000561781 GALNT13Q8IUC8 556 aa19.02■□□□□ 0.64
RAB40C-206ENST00000561781 PPIL6Q8IXY8 311 aa19.02■□□□□ 0.64
RAB40C-206ENST00000561781 C2orf69Q8N8R5 385 aa19.02■□□□□ 0.64
RAB40C-206ENST00000561781 FAM47BQ8NA70 645 aa19.02■□□□□ 0.64
RAB40C-206ENST00000561781 ATL1Q8WXF7 558 aa19.02■□□□□ 0.64
RAB40C-206ENST00000561781 APBB2Q92870 758 aa19.02■□□□□ 0.64
RAB40C-206ENST00000561781 CBWD1Q9BRT8 395 aa19.02■□□□□ 0.64
RAB40C-206ENST00000561781 ARMC1Q9NVT9 282 aa19.02■□□□□ 0.64
RAB40C-206ENST00000561781 GDAP2Q9NXN4 497 aa19.02■□□□□ 0.64
RAB40C-206ENST00000561781 CROCCQ5TZA2 2017 aa19.02■□□□□ 0.64
RAB40C-206ENST00000561781 SYCE1LA8MT33 242 aa19.02■□□□□ 0.63
RAB40C-206ENST00000561781 E7ESA3 106 aa19.02■□□□□ 0.63
RAB40C-206ENST00000561781 MSH4O15457 936 aa19.02■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms