RNA–Protein interactions for RNA: ENST00000561395.5

TPM1-231, Transcript of tropomyosin 1, human

TSL 5

Gene TPM1, Length 673 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TPM1-231	ENST00000561395	ABLIM3	O94929	683 aa		7.76	□□□□□ -1.17
TPM1-231	ENST00000561395	KRT14	P02533	472 aa		7.76	□□□□□ -1.17
TPM1-231	ENST00000561395	UROD	P06132	367 aa		7.76	□□□□□ -1.17
TPM1-231	ENST00000561395	DCN	P07585	359 aa	Known RBP	7.76	□□□□□ -1.17
TPM1-231	ENST00000561395	RBP3	P10745	1247 aa		7.76	□□□□□ -1.17
TPM1-231	ENST00000561395	HOXB3	P14651	431 aa	Predicted RBP	7.76	□□□□□ -1.17
TPM1-231	ENST00000561395	ATF6	P18850	670 aa		7.76	□□□□□ -1.17
TPM1-231	ENST00000561395	YWHAQ	P27348	245 aa		7.76	□□□□□ -1.17
TPM1-231	ENST00000561395	HSPA9	P38646	679 aa	Known RBP	7.76	□□□□□ -1.17
TPM1-231	ENST00000561395	NR2C2	P49116	596 aa		7.76	□□□□□ -1.17
TPM1-231	ENST00000561395	TUFM	P49411	452 aa	Known RBP	7.76	□□□□□ -1.17
TPM1-231	ENST00000561395	ZNF135	P52742	658 aa	Predicted RBP	7.76	□□□□□ -1.17
TPM1-231	ENST00000561395	ARHGAP8	P85298	464 aa		7.76	□□□□□ -1.17
TPM1-231	ENST00000561395	CREM	Q03060	361 aa		7.76	□□□□□ -1.17
TPM1-231	ENST00000561395	CALCOCO2	Q13137	446 aa		7.76	□□□□□ -1.17
TPM1-231	ENST00000561395	DPYS	Q14117	519 aa		7.76	□□□□□ -1.17
TPM1-231	ENST00000561395	TRIP13	Q15645	432 aa	Predicted RBP	7.76	□□□□□ -1.17
TPM1-231	ENST00000561395	ARL13B	Q3SXY8	428 aa		7.76	□□□□□ -1.17
TPM1-231	ENST00000561395	BRMS1L	Q5PSV4	323 aa		7.76	□□□□□ -1.17
TPM1-231	ENST00000561395	ATAT1	Q5SQI0	421 aa		7.76	□□□□□ -1.17
TPM1-231	ENST00000561395	TPGS2	Q68CL5	300 aa		7.76	□□□□□ -1.17
TPM1-231	ENST00000561395	NCBP2-AS2	Q69YL0	99 aa		7.76	□□□□□ -1.17
TPM1-231	ENST00000561395	C1orf228	Q6PIY5	440 aa		7.76	□□□□□ -1.17
TPM1-231	ENST00000561395	CCDC149	Q6ZUS6	474 aa		7.76	□□□□□ -1.17
TPM1-231	ENST00000561395	DENND5B	Q6ZUT9	1274 aa		7.76	□□□□□ -1.17
TPM1-231	ENST00000561395	RFX8	Q6ZV50	586 aa		7.76	□□□□□ -1.17
TPM1-231	ENST00000561395	GSTA5	Q7RTV2	222 aa		7.76	□□□□□ -1.17
TPM1-231	ENST00000561395	TMC3	Q7Z5M5	1100 aa		7.76	□□□□□ -1.17
TPM1-231	ENST00000561395	GPR65	Q8IYL9	337 aa		7.76	□□□□□ -1.17
TPM1-231	ENST00000561395	GLIS1	Q8NBF1	620 aa		7.76	□□□□□ -1.17
TPM1-231	ENST00000561395	TSEN2	Q8NCE0	465 aa	Known RBP	7.76	□□□□□ -1.17
TPM1-231	ENST00000561395	FBXO25	Q8TCJ0	367 aa		7.76	□□□□□ -1.17
TPM1-231	ENST00000561395	GPR152	Q8TDT2	470 aa		7.76	□□□□□ -1.17
TPM1-231	ENST00000561395	P3H4	Q92791	437 aa		7.76	□□□□□ -1.17
TPM1-231	ENST00000561395	ART4	Q93070	314 aa		7.76	□□□□□ -1.17
TPM1-231	ENST00000561395	FBXO32	Q969P5	355 aa		7.76	□□□□□ -1.17
TPM1-231	ENST00000561395	TMEM121	Q9BTD3	319 aa		7.76	□□□□□ -1.17
TPM1-231	ENST00000561395	TBC1D17	Q9HA65	648 aa		7.76	□□□□□ -1.17
TPM1-231	ENST00000561395	KCNK12	Q9HB15	430 aa		7.76	□□□□□ -1.17
TPM1-231	ENST00000561395	ANLN	Q9NQW6	1124 aa		7.76	□□□□□ -1.17
TPM1-231	ENST00000561395	ARHGEF4	Q9NR80	690 aa		7.76	□□□□□ -1.17
TPM1-231	ENST00000561395	ETNK2	Q9NVF9	386 aa		7.76	□□□□□ -1.17
TPM1-231	ENST00000561395	DZANK1	Q9NVP4	752 aa		7.76	□□□□□ -1.17
TPM1-231	ENST00000561395	TMEM51	Q9NW97	253 aa		7.76	□□□□□ -1.17
TPM1-231	ENST00000561395	OSER1	Q9NX31	292 aa		7.76	□□□□□ -1.17
TPM1-231	ENST00000561395	ARHGEF38	Q9NXL2	777 aa		7.76	□□□□□ -1.17
TPM1-231	ENST00000561395	CLIC5	Q9NZA1	410 aa		7.76	□□□□□ -1.17
TPM1-231	ENST00000561395	FAM120A	Q9NZB2	1118 aa	Known RBP eCLIP	7.76	□□□□□ -1.17
TPM1-231	ENST00000561395	HSFX1	Q9UBD0	423 aa		7.76	□□□□□ -1.17
TPM1-231	ENST00000561395	CA14	Q9ULX7	337 aa		7.76	□□□□□ -1.17
TPM1-231	ENST00000561395	HPCAL4	Q9UM19	191 aa		7.76	□□□□□ -1.17
TPM1-231	ENST00000561395	PCDHGA4	Q9Y5G9	962 aa		7.76	□□□□□ -1.17
TPM1-231	ENST00000561395	SETX	Q7Z333	2677 aa	Known RBP	7.75	□□□□□ -1.17
TPM1-231	ENST00000561395	SPAG17	Q6Q759	2223 aa		7.75	□□□□□ -1.17
TPM1-231	ENST00000561395	OBSL1	O75147	1896 aa		7.75	□□□□□ -1.17
TPM1-231	ENST00000561395	BCLAF3	A2AJT9	711 aa	Known RBP	7.75	□□□□□ -1.17
TPM1-231	ENST00000561395	CFAP69	A5D8W1	941 aa		7.75	□□□□□ -1.17
TPM1-231	ENST00000561395	C2orf71	A6NGG8	1288 aa		7.75	□□□□□ -1.17
TPM1-231	ENST00000561395	SLC38A8	A6NNN8	435 aa		7.75	□□□□□ -1.17
TPM1-231	ENST00000561395	FAM72C	H0Y354	149 aa		7.75	□□□□□ -1.17
TPM1-231	ENST00000561395	SGK1	O00141	431 aa		7.75	□□□□□ -1.17
TPM1-231	ENST00000561395	EEF2K	O00418	725 aa	Known RBP	7.75	□□□□□ -1.17
TPM1-231	ENST00000561395	DCLK1	O15075	740 aa		7.75	□□□□□ -1.17
TPM1-231	ENST00000561395	MSI1	O43347	362 aa	Known RBP	7.75	□□□□□ -1.17
TPM1-231	ENST00000561395	MFSD11	O43934	449 aa		7.75	□□□□□ -1.17
TPM1-231	ENST00000561395	PPFIA2	O75334	1257 aa		7.75	□□□□□ -1.17
TPM1-231	ENST00000561395	SEC24A	O95486	1093 aa		7.75	□□□□□ -1.17
TPM1-231	ENST00000561395	ZDHHC11B	P0C7U3	371 aa		7.75	□□□□□ -1.17
TPM1-231	ENST00000561395	ITIH2	P19823	946 aa		7.75	□□□□□ -1.17
TPM1-231	ENST00000561395	AMPD1	P23109	780 aa		7.75	□□□□□ -1.17
TPM1-231	ENST00000561395	ADCY8	P40145	1251 aa		7.75	□□□□□ -1.17
TPM1-231	ENST00000561395	HCAR3	P49019	387 aa		7.75	□□□□□ -1.17
TPM1-231	ENST00000561395	VPS41	P49754	854 aa		7.75	□□□□□ -1.17
TPM1-231	ENST00000561395	PLTP	P55058	493 aa		7.75	□□□□□ -1.17
TPM1-231	ENST00000561395	GDF10	P55107	478 aa		7.75	□□□□□ -1.17
TPM1-231	ENST00000561395	CAV1	Q03135	178 aa		7.75	□□□□□ -1.17
TPM1-231	ENST00000561395	GBE1	Q04446	702 aa		7.75	□□□□□ -1.17
TPM1-231	ENST00000561395	DMWD	Q09019	674 aa		7.75	□□□□□ -1.17
TPM1-231	ENST00000561395	TAF10	Q12962	218 aa		7.75	□□□□□ -1.17
TPM1-231	ENST00000561395	GPS1	Q13098	491 aa		7.75	□□□□□ -1.17
TPM1-231	ENST00000561395	RAB33A	Q14088	237 aa		7.75	□□□□□ -1.17
TPM1-231	ENST00000561395	PPP2R5D	Q14738	602 aa		7.75	□□□□□ -1.17
TPM1-231	ENST00000561395	P3H1	Q32P28	736 aa		7.75	□□□□□ -1.17
TPM1-231	ENST00000561395	PPM1J	Q5JR12	505 aa		7.75	□□□□□ -1.17
TPM1-231	ENST00000561395	FAM72A	Q5TYM5	149 aa		7.75	□□□□□ -1.17
TPM1-231	ENST00000561395	IZUMO3	Q5VZ72	239 aa		7.75	□□□□□ -1.17
TPM1-231	ENST00000561395	FAM72D	Q6L9T8	149 aa		7.75	□□□□□ -1.17
TPM1-231	ENST00000561395	DARS2	Q6PI48	645 aa	Known RBP	7.75	□□□□□ -1.17
TPM1-231	ENST00000561395	RHBDF2	Q6PJF5	856 aa		7.75	□□□□□ -1.17
TPM1-231	ENST00000561395	OTOP3	Q7RTS5	596 aa		7.75	□□□□□ -1.17
TPM1-231	ENST00000561395	PRUNE1	Q86TP1	453 aa		7.75	□□□□□ -1.17
TPM1-231	ENST00000561395	FAM72B	Q86X60	149 aa		7.75	□□□□□ -1.17
TPM1-231	ENST00000561395	CDKL3	Q8IVW4	592 aa	Predicted RBP	7.75	□□□□□ -1.17
TPM1-231	ENST00000561395	C1orf210	Q8IVY1	113 aa		7.75	□□□□□ -1.17
TPM1-231	ENST00000561395	UNC45B	Q8IWX7	931 aa		7.75	□□□□□ -1.17
TPM1-231	ENST00000561395	VPS52	Q8N1B4	723 aa		7.75	□□□□□ -1.17
TPM1-231	ENST00000561395	BBOF1	Q8ND07	529 aa		7.75	□□□□□ -1.17
TPM1-231	ENST00000561395	GIPC2	Q8TF65	315 aa		7.75	□□□□□ -1.17
TPM1-231	ENST00000561395	RSAD2	Q8WXG1	361 aa		7.75	□□□□□ -1.17
TPM1-231	ENST00000561395	COL26A1	Q96A83	441 aa		7.75	□□□□□ -1.17

Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms