RNA–Protein interactions for RNA: ENST00000560842.1

PSMA4-221, Transcript of proteasome subunit alpha 4, humanhuman

TSL 1 (best)

Gene PSMA4, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA4-221ENST00000560842 TRAPPC9Q96Q05 1148 aa4.94□□□□□ -1.62
PSMA4-221ENST00000560842 PIMREGQ9BSJ6 248 aa4.94□□□□□ -1.62
PSMA4-221ENST00000560842 IL21RQ9HBE5 538 aa4.94□□□□□ -1.62
PSMA4-221ENST00000560842 SAYSD1Q9NPB0 183 aa4.94□□□□□ -1.62
PSMA4-221ENST00000560842 PAPOLBQ9NRJ5 636 aaKnown RBP4.94□□□□□ -1.62
PSMA4-221ENST00000560842 TMEM184CQ9NVA4 438 aa4.94□□□□□ -1.62
PSMA4-221ENST00000560842 LRP12Q9Y561 859 aa4.94□□□□□ -1.62
PSMA4-221ENST00000560842 CACNA1IQ9P0X4 2223 aa4.94□□□□□ -1.62
PSMA4-221ENST00000560842 ZNF335Q9H4Z2 1342 aaPredicted RBP4.94□□□□□ -1.62
PSMA4-221ENST00000560842 TRBV5-3A0A0A0MS03 114 aa4.93□□□□□ -1.62
PSMA4-221ENST00000560842 INSIG1O15503 277 aa4.93□□□□□ -1.62
PSMA4-221ENST00000560842 TFRCP02786 760 aaKnown RBP4.93□□□□□ -1.62
PSMA4-221ENST00000560842 WNT1P04628 370 aa4.93□□□□□ -1.62
PSMA4-221ENST00000560842 ALDOCP09972 364 aaKnown RBP4.93□□□□□ -1.62
PSMA4-221ENST00000560842 PEPDP12955 493 aa4.93□□□□□ -1.62
PSMA4-221ENST00000560842 MCM2P49736 904 aa4.93□□□□□ -1.62
PSMA4-221ENST00000560842 RCAN1P53805 252 aa4.93□□□□□ -1.62
PSMA4-221ENST00000560842 B4GALNT1Q00973 533 aa4.93□□□□□ -1.62
PSMA4-221ENST00000560842 POSTNQ15063 836 aa4.93□□□□□ -1.62
PSMA4-221ENST00000560842 PGM5Q15124 567 aa4.93□□□□□ -1.62
PSMA4-221ENST00000560842 TWIST1Q15672 202 aa4.93□□□□□ -1.62
PSMA4-221ENST00000560842 KIAA1755Q5JYT7 1200 aa4.93□□□□□ -1.62
PSMA4-221ENST00000560842 DHRS13Q6UX07 377 aa4.93□□□□□ -1.62
PSMA4-221ENST00000560842 RASGRP2Q7LDG7 609 aa4.93□□□□□ -1.62
PSMA4-221ENST00000560842 MDGA2Q7Z553 956 aa4.93□□□□□ -1.62
PSMA4-221ENST00000560842 PTGR2Q8N8N7 351 aaPredicted RBP4.93□□□□□ -1.62
PSMA4-221ENST00000560842 SPATA5Q8NB90 893 aa4.93□□□□□ -1.62
PSMA4-221ENST00000560842 PRSS3P2Q8NHM4 247 aa4.93□□□□□ -1.62
PSMA4-221ENST00000560842 SPPL3Q8TCT6 385 aa4.93□□□□□ -1.62
PSMA4-221ENST00000560842 ZFYVE19Q96K21 471 aa4.93□□□□□ -1.62
PSMA4-221ENST00000560842 HERPUD2Q9BSE4 406 aa4.93□□□□□ -1.62
PSMA4-221ENST00000560842 ISCA1Q9BUE6 129 aa4.93□□□□□ -1.62
PSMA4-221ENST00000560842 ABHD14AQ9BUJ0 271 aa4.93□□□□□ -1.62
PSMA4-221ENST00000560842 BRD8Q9H0E9 1235 aa4.93□□□□□ -1.62
PSMA4-221ENST00000560842 MYLK2Q9H1R3 596 aa4.93□□□□□ -1.62
PSMA4-221ENST00000560842 MTMR4Q9NYA4 1195 aa4.93□□□□□ -1.62
PSMA4-221ENST00000560842 PCDHA10Q9Y5I2 948 aa4.93□□□□□ -1.62
PSMA4-221ENST00000560842 LY6G6EA0A0G2JKS1 128 aa4.92□□□□□ -1.62
PSMA4-221ENST00000560842 KCNJ18B7U540 433 aa4.92□□□□□ -1.62
PSMA4-221ENST00000560842 MCIDASD6RGH6 385 aa4.92□□□□□ -1.62
PSMA4-221ENST00000560842 PPEF2O14830 753 aa4.92□□□□□ -1.62
PSMA4-221ENST00000560842 HNRNPRO43390 633 aaKnown RBP4.92□□□□□ -1.62
PSMA4-221ENST00000560842 ADD2P35612 726 aa4.92□□□□□ -1.62
PSMA4-221ENST00000560842 MMP13P45452 471 aa4.92□□□□□ -1.62
PSMA4-221ENST00000560842 ZNF91Q05481 1191 aa4.92□□□□□ -1.62
PSMA4-221ENST00000560842 PRKG1Q13976 671 aa4.92□□□□□ -1.62
PSMA4-221ENST00000560842 EFR3AQ14156 821 aa4.92□□□□□ -1.62
PSMA4-221ENST00000560842 LIPMQ5VYY2 423 aa4.92□□□□□ -1.62
PSMA4-221ENST00000560842 SAMD14Q8IZD0 417 aaPredicted RBP4.92□□□□□ -1.62
PSMA4-221ENST00000560842 ENDOVQ8N8Q3 282 aaKnown RBP4.92□□□□□ -1.62
PSMA4-221ENST00000560842 C3orf49Q96BT1 292 aa4.92□□□□□ -1.62
PSMA4-221ENST00000560842 CLMNQ96JQ2 1002 aa4.92□□□□□ -1.62
PSMA4-221ENST00000560842 PAGR1Q9BTK6 254 aa4.92□□□□□ -1.62
PSMA4-221ENST00000560842 ARHGAP39Q9C0H5 1083 aa4.92□□□□□ -1.62
PSMA4-221ENST00000560842 AGO2Q9UKV8 859 aaKnown RBP4.92□□□□□ -1.62
PSMA4-221ENST00000560842 RCE1Q9Y256 329 aa4.92□□□□□ -1.62
PSMA4-221ENST00000560842 DTX4Q9Y2E6 619 aa4.92□□□□□ -1.62
PSMA4-221ENST00000560842 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.92□□□□□ -1.62
PSMA4-221ENST00000560842 TTBK1Q5TCY1 1321 aaPredicted RBP4.92□□□□□ -1.62
PSMA4-221ENST00000560842 A0A0G2JK05 382 aa4.91□□□□□ -1.62
PSMA4-221ENST00000560842 KIR2DS5A0A0G2JLQ3 304 aa4.91□□□□□ -1.62
PSMA4-221ENST00000560842 AGAP5A6NIR3 686 aa4.91□□□□□ -1.62
PSMA4-221ENST00000560842 F8W810 466 aa4.91□□□□□ -1.62
PSMA4-221ENST00000560842 KIR2DS3K7RE56 304 aa4.91□□□□□ -1.62
PSMA4-221ENST00000560842 ADAM10O14672 748 aa4.91□□□□□ -1.62
PSMA4-221ENST00000560842 PRPF4O43172 522 aaKnown RBP eCLIP4.91□□□□□ -1.62
PSMA4-221ENST00000560842 NBNO60934 754 aa4.91□□□□□ -1.62
PSMA4-221ENST00000560842 DHRS4L1P0CG22 281 aa4.91□□□□□ -1.62
PSMA4-221ENST00000560842 CPA2P48052 419 aa4.91□□□□□ -1.62
PSMA4-221ENST00000560842 PCP4P48539 62 aa4.91□□□□□ -1.62
PSMA4-221ENST00000560842 POLGP54098 1239 aaPredicted RBP4.91□□□□□ -1.62
PSMA4-221ENST00000560842 PRKAA2P54646 552 aa4.91□□□□□ -1.62
PSMA4-221ENST00000560842 ARL4CP56559 192 aa4.91□□□□□ -1.62
PSMA4-221ENST00000560842 LAMB3Q13751 1172 aa4.91□□□□□ -1.62
PSMA4-221ENST00000560842 RPS6KA2Q15349 733 aa4.91□□□□□ -1.62
PSMA4-221ENST00000560842 ANO1Q5XXA6 986 aa4.91□□□□□ -1.62
PSMA4-221ENST00000560842 TTLL5Q6EMB2 1281 aa4.91□□□□□ -1.62
PSMA4-221ENST00000560842 ANKS1BQ7Z6G8 1248 aa4.91□□□□□ -1.62
PSMA4-221ENST00000560842 MOGAT3Q86VF5 341 aa4.91□□□□□ -1.62
PSMA4-221ENST00000560842 MPLKIPQ8TAP9 179 aa4.91□□□□□ -1.62
PSMA4-221ENST00000560842 MSI2Q96DH6 328 aaKnown RBP4.91□□□□□ -1.62
PSMA4-221ENST00000560842 PIGSQ96S52 555 aa4.91□□□□□ -1.62
PSMA4-221ENST00000560842 TUBB6Q9BUF5 446 aa4.91□□□□□ -1.62
PSMA4-221ENST00000560842 SPRTNQ9H040 489 aaPredicted RBP4.91□□□□□ -1.62
PSMA4-221ENST00000560842 PDE11AQ9HCR9 933 aa4.91□□□□□ -1.62
PSMA4-221ENST00000560842 TMEM45AQ9NWC5 275 aa4.91□□□□□ -1.62
PSMA4-221ENST00000560842 PKP3Q9Y446 797 aa4.91□□□□□ -1.62
PSMA4-221ENST00000560842 HMX3A6NHT5 357 aa4.9□□□□□ -1.63
PSMA4-221ENST00000560842 ZNF814B7Z6K7 855 aa4.9□□□□□ -1.63
PSMA4-221ENST00000560842 E7EVH7 732 aa4.9□□□□□ -1.63
PSMA4-221ENST00000560842 PIP5K1CO60331 668 aa4.9□□□□□ -1.63
PSMA4-221ENST00000560842 TK1P04183 234 aa4.9□□□□□ -1.63
PSMA4-221ENST00000560842 FGF2P09038 288 aa4.9□□□□□ -1.63
PSMA4-221ENST00000560842 SNHG28P0DPA3 235 aa4.9□□□□□ -1.63
PSMA4-221ENST00000560842 PRF1P14222 555 aa4.9□□□□□ -1.63
PSMA4-221ENST00000560842 CHN1P15882 459 aa4.9□□□□□ -1.63
PSMA4-221ENST00000560842 PRPH2P23942 346 aa4.9□□□□□ -1.63
PSMA4-221ENST00000560842 HALP42357 657 aa4.9□□□□□ -1.63
PSMA4-221ENST00000560842 MTX1Q13505 466 aa4.9□□□□□ -1.63
PSMA4-221ENST00000560842 RBMS2Q15434 407 aaKnown RBP4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms