RNA–Protein interactions for RNA: ENST00000560829.5

SNX1-211, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 1,869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-211ENST00000560829 GSTA2P09210 222 aa13.25□□□□□ -0.29
SNX1-211ENST00000560829 CSH1P0DML2 217 aa13.25□□□□□ -0.29
SNX1-211ENST00000560829 CSH2P0DML3 217 aa13.25□□□□□ -0.29
SNX1-211ENST00000560829 HMGA1P17096 107 aaKnown RBP13.25□□□□□ -0.29
SNX1-211ENST00000560829 CCNCP24863 283 aa13.25□□□□□ -0.29
SNX1-211ENST00000560829 SSTR1P30872 391 aa13.25□□□□□ -0.29
SNX1-211ENST00000560829 HTRA4P83105 476 aaPredicted RBP13.25□□□□□ -0.29
SNX1-211ENST00000560829 KLHL38Q2WGJ6 581 aa13.25□□□□□ -0.29
SNX1-211ENST00000560829 TEX44Q53QW1 395 aa13.25□□□□□ -0.29
SNX1-211ENST00000560829 MS4A13Q5J8X5 152 aa13.25□□□□□ -0.29
SNX1-211ENST00000560829 SYCP2LQ5T4T6 812 aa13.25□□□□□ -0.29
SNX1-211ENST00000560829 C3orf62Q6ZUJ4 267 aa13.25□□□□□ -0.29
SNX1-211ENST00000560829 C16orf59Q7L2K0 433 aa13.25□□□□□ -0.29
SNX1-211ENST00000560829 TAOK1Q7L7X3 1001 aa13.25□□□□□ -0.29
SNX1-211ENST00000560829 TADA2BQ86TJ2 420 aa13.25□□□□□ -0.29
SNX1-211ENST00000560829 EXOC3L1Q86VI1 746 aa13.25□□□□□ -0.29
SNX1-211ENST00000560829 NLRP14Q86W24 1093 aa13.25□□□□□ -0.29
SNX1-211ENST00000560829 MAML1Q92585 1016 aa13.25□□□□□ -0.29
SNX1-211ENST00000560829 TRMT2BQ96GJ1 504 aaKnown RBP13.25□□□□□ -0.29
SNX1-211ENST00000560829 CTNNAL1Q9UBT7 734 aa13.25□□□□□ -0.29
SNX1-211ENST00000560829 HBS1LQ9Y450 684 aaKnown RBP13.25□□□□□ -0.29
SNX1-211ENST00000560829 ACTL7BQ9Y614 415 aa13.25□□□□□ -0.29
SNX1-211ENST00000560829 SLC12A8A0AV02 714 aa13.24□□□□□ -0.29
SNX1-211ENST00000560829 AVILO75366 819 aa13.24□□□□□ -0.29
SNX1-211ENST00000560829 RHOQP17081 205 aa13.24□□□□□ -0.29
SNX1-211ENST00000560829 PSMB4P28070 264 aa13.24□□□□□ -0.29
SNX1-211ENST00000560829 GNGT1P63211 74 aa13.24□□□□□ -0.29
SNX1-211ENST00000560829 LRRC8BQ6P9F7 803 aa13.24□□□□□ -0.29
SNX1-211ENST00000560829 PID1Q7Z2X4 250 aa13.24□□□□□ -0.29
SNX1-211ENST00000560829 MIB1Q86YT6 1006 aa13.24□□□□□ -0.29
SNX1-211ENST00000560829 KLHDC8BQ8IXV7 354 aa13.24□□□□□ -0.29
SNX1-211ENST00000560829 ARHGEF2Q92974 986 aaKnown RBP13.24□□□□□ -0.29
SNX1-211ENST00000560829 CELF6Q96J87 481 aaKnown RBP13.24□□□□□ -0.29
SNX1-211ENST00000560829 SIGLEC10Q96LC7 697 aa13.24□□□□□ -0.29
SNX1-211ENST00000560829 DHRS4Q9BTZ2 278 aa13.24□□□□□ -0.29
SNX1-211ENST00000560829 CCSER2Q9H7U1 834 aa13.24□□□□□ -0.29
SNX1-211ENST00000560829 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.24□□□□□ -0.29
SNX1-211ENST00000560829 DONSONQ9NYP3 566 aa13.24□□□□□ -0.29
SNX1-211ENST00000560829 SEPT10Q9P0V9 454 aa13.24□□□□□ -0.29
SNX1-211ENST00000560829 KLHL8Q9P2G9 620 aaPredicted RBP13.24□□□□□ -0.29
SNX1-211ENST00000560829 MAGED2Q9UNF1 606 aaPredicted RBP13.24□□□□□ -0.29
SNX1-211ENST00000560829 YIPF1Q9Y548 306 aa13.24□□□□□ -0.29
SNX1-211ENST00000560829 ZNF840PA6NDX5 716 aa13.23□□□□□ -0.29
SNX1-211ENST00000560829 DRGXA6NNA5 263 aa13.23□□□□□ -0.29
SNX1-211ENST00000560829 ERI2A8K979 691 aaKnown RBP13.23□□□□□ -0.29
SNX1-211ENST00000560829 CACNG3O60359 315 aa13.23□□□□□ -0.29
SNX1-211ENST00000560829 LILRB3O75022 631 aa13.23□□□□□ -0.29
SNX1-211ENST00000560829 SUN1O94901 812 aa13.23□□□□□ -0.29
SNX1-211ENST00000560829 GJB5O95377 273 aa13.23□□□□□ -0.29
SNX1-211ENST00000560829 LINC00271P0C7V0 271 aa13.23□□□□□ -0.29
SNX1-211ENST00000560829 GEMIN4P57678 1058 aaKnown RBP13.23□□□□□ -0.29
SNX1-211ENST00000560829 ZBTB17Q13105 803 aa13.23□□□□□ -0.29
SNX1-211ENST00000560829 NR1H3Q13133 447 aa13.23□□□□□ -0.29
SNX1-211ENST00000560829 PPIGQ13427 754 aaKnown RBP eCLIP13.23□□□□□ -0.292e-7■■□□□ 12.1
SNX1-211ENST00000560829 MTM1Q13496 603 aa13.23□□□□□ -0.29
SNX1-211ENST00000560829 SKIDA1Q1XH10 827 aa13.23□□□□□ -0.29
SNX1-211ENST00000560829 NUGGCQ68CJ6 796 aa13.23□□□□□ -0.29
SNX1-211ENST00000560829 ITPRIPL1Q6GPH6 555 aa13.23□□□□□ -0.29
SNX1-211ENST00000560829 LRRC31Q6UY01 552 aa13.23□□□□□ -0.29
SNX1-211ENST00000560829 CAPN12Q6ZSI9 719 aa13.23□□□□□ -0.29
SNX1-211ENST00000560829 OTOP2Q7RTS6 562 aa13.23□□□□□ -0.29
SNX1-211ENST00000560829 TCEAL8Q8IYN2 117 aa13.23□□□□□ -0.29
SNX1-211ENST00000560829 CYP4X1Q8N118 509 aa13.23□□□□□ -0.29
SNX1-211ENST00000560829 UMODL1-AS1Q8N2C9 162 aa13.23□□□□□ -0.29
SNX1-211ENST00000560829 PDCD7Q8N8D1 485 aaKnown RBP13.23□□□□□ -0.29
SNX1-211ENST00000560829 FBF1Q8TES7 1133 aa13.23□□□□□ -0.29
SNX1-211ENST00000560829 CENPTQ96BT3 561 aa13.23□□□□□ -0.29
SNX1-211ENST00000560829 TEKT5Q96M29 485 aa13.23□□□□□ -0.29
SNX1-211ENST00000560829 PRMT1Q99873 361 aaKnown RBP13.23□□□□□ -0.29
SNX1-211ENST00000560829 GORASP1Q9BQQ3 440 aa13.23□□□□□ -0.29
SNX1-211ENST00000560829 CEP41Q9BYV8 373 aa13.23□□□□□ -0.29
SNX1-211ENST00000560829 ZYG11BQ9C0D3 744 aa13.23□□□□□ -0.29
SNX1-211ENST00000560829 SLC39A8Q9C0K1 460 aa13.23□□□□□ -0.29
SNX1-211ENST00000560829 GBA3Q9H227 469 aa13.23□□□□□ -0.29
SNX1-211ENST00000560829 CYP4F11Q9HBI6 524 aa13.23□□□□□ -0.29
SNX1-211ENST00000560829 RXFP1Q9HBX9 757 aa13.23□□□□□ -0.29
SNX1-211ENST00000560829 TMEM248Q9NWD8 314 aa13.23□□□□□ -0.29
SNX1-211ENST00000560829 DNMT3LQ9UJW3 386 aa13.23□□□□□ -0.29
SNX1-211ENST00000560829 MAFKO60675 156 aa13.23□□□□□ -0.29
SNX1-211ENST00000560829 C1QAP02745 245 aa13.23□□□□□ -0.29
SNX1-211ENST00000560829 CD68P34810 354 aaPredicted RBP13.23□□□□□ -0.29
SNX1-211ENST00000560829 ATP5C1P36542 298 aaKnown RBP13.23□□□□□ -0.29
SNX1-211ENST00000560829 ALDH1A3P47895 512 aa13.23□□□□□ -0.29
SNX1-211ENST00000560829 PPP3CCP48454 512 aa13.23□□□□□ -0.29
SNX1-211ENST00000560829 NDST2P52849 883 aa13.23□□□□□ -0.29
SNX1-211ENST00000560829 GUCY1A3Q02108 690 aa13.23□□□□□ -0.29
SNX1-211ENST00000560829 CREMQ03060 361 aa13.23□□□□□ -0.29
SNX1-211ENST00000560829 ATPAF2Q8N5M1 289 aa13.23□□□□□ -0.29
SNX1-211ENST00000560829 DEPDC1BQ8WUY9 529 aa13.23□□□□□ -0.29
SNX1-211ENST00000560829 FATE1Q969F0 183 aa13.23□□□□□ -0.29
SNX1-211ENST00000560829 CYTH2Q99418 400 aa13.23□□□□□ -0.29
SNX1-211ENST00000560829 EBNA1BP2Q99848 306 aaKnown RBP13.23□□□□□ -0.29
SNX1-211ENST00000560829 PLAC1Q9HBJ0 212 aa13.23□□□□□ -0.29
SNX1-211ENST00000560829 MRPL17Q9NRX2 175 aaKnown RBP13.23□□□□□ -0.29
SNX1-211ENST00000560829 NDFIP2Q9NV92 336 aa13.23□□□□□ -0.29
SNX1-211ENST00000560829 PSMC3IPQ9P2W1 217 aaPredicted RBP13.23□□□□□ -0.29
SNX1-211ENST00000560829 VANGL2Q9ULK5 521 aa13.23□□□□□ -0.29
SNX1-211ENST00000560829 PCDHB12Q9Y5F1 795 aa13.23□□□□□ -0.29
SNX1-211ENST00000560829 MYO16Q9Y6X6 1858 aa13.22□□□□□ -0.29
SNX1-211ENST00000560829 TCRBV9S1A1TA0A576 114 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms