RNA–Protein interactions for RNA: ENST00000560514.1

TSPAN3-208, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 638 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-208ENST00000560514 PROX2Q3B8N5 592 aa18.48■□□□□ 0.55
TSPAN3-208ENST00000560514 C1orf220Q5T0J3 134 aa18.48■□□□□ 0.55
TSPAN3-208ENST00000560514 ARHGAP17Q68EM7 881 aa18.48■□□□□ 0.55
TSPAN3-208ENST00000560514 CARNMT1Q8N4J0 409 aa18.48■□□□□ 0.55
TSPAN3-208ENST00000560514 KDM1BQ8NB78 822 aa18.48■□□□□ 0.55
TSPAN3-208ENST00000560514 SLC4A11Q8NBS3 891 aa18.48■□□□□ 0.55
TSPAN3-208ENST00000560514 HJURPQ8NCD3 748 aaPredicted RBP18.48■□□□□ 0.55
TSPAN3-208ENST00000560514 KIAA0895Q8NCT3 520 aa18.48■□□□□ 0.55
TSPAN3-208ENST00000560514 FIBINQ8TAL6 211 aa18.48■□□□□ 0.55
TSPAN3-208ENST00000560514 MYO19Q96H55 970 aa18.48■□□□□ 0.55
TSPAN3-208ENST00000560514 KCTD10Q9H3F6 313 aa18.48■□□□□ 0.55
TSPAN3-208ENST00000560514 CISHQ9NSE2 258 aa18.48■□□□□ 0.55
TSPAN3-208ENST00000560514 ERVW-1Q9UQF0 538 aa18.48■□□□□ 0.55
TSPAN3-208ENST00000560514 PCDHB1Q9Y5F3 818 aa18.48■□□□□ 0.55
TSPAN3-208ENST00000560514 GOLGA6L7A0A1B0GV03 622 aa18.47■□□□□ 0.55
TSPAN3-208ENST00000560514 CYSRT1A8MQ03 144 aa18.47■□□□□ 0.55
TSPAN3-208ENST00000560514 MAPK13O15264 365 aa18.47■□□□□ 0.55
TSPAN3-208ENST00000560514 KLK10O43240 276 aa18.47■□□□□ 0.55
TSPAN3-208ENST00000560514 SIGLEC6O43699 453 aa18.47■□□□□ 0.55
TSPAN3-208ENST00000560514 YEATS4O95619 227 aa18.47■□□□□ 0.55
TSPAN3-208ENST00000560514 IL1BP01584 269 aa18.47■□□□□ 0.55
TSPAN3-208ENST00000560514 MPOP05164 745 aa18.47■□□□□ 0.55
TSPAN3-208ENST00000560514 SRPRAP08240 638 aaKnown RBP18.47■□□□□ 0.55
TSPAN3-208ENST00000560514 NUDT1P36639 197 aa18.47■□□□□ 0.55
TSPAN3-208ENST00000560514 NNMTP40261 264 aa18.47■□□□□ 0.55
TSPAN3-208ENST00000560514 RAD23BP54727 409 aa18.47■□□□□ 0.55
TSPAN3-208ENST00000560514 GABREP78334 506 aa18.47■□□□□ 0.55
TSPAN3-208ENST00000560514 ZNF211Q13398 564 aaPredicted RBP18.47■□□□□ 0.55
TSPAN3-208ENST00000560514 LY6DQ14210 128 aa18.47■□□□□ 0.55
TSPAN3-208ENST00000560514 ARID5BQ14865 1188 aa18.47■□□□□ 0.55
TSPAN3-208ENST00000560514 GOLGA7BQ2TAP0 167 aa18.47■□□□□ 0.55
TSPAN3-208ENST00000560514 IQCHQ86VS3 1027 aa18.47■□□□□ 0.55
TSPAN3-208ENST00000560514 SPATS2Q86XZ4 545 aaKnown RBP18.47■□□□□ 0.55
TSPAN3-208ENST00000560514 AADATQ8N5Z0 425 aa18.47■□□□□ 0.55
TSPAN3-208ENST00000560514 FAXDC2Q96IV6 333 aa18.47■□□□□ 0.55
TSPAN3-208ENST00000560514 DEPDC7Q96QD5 511 aa18.47■□□□□ 0.55
TSPAN3-208ENST00000560514 YJEFN3A6XGL0 299 aa18.46■□□□□ 0.55
TSPAN3-208ENST00000560514 TTC34A8MYJ7 566 aa18.46■□□□□ 0.55
TSPAN3-208ENST00000560514 E7ENQ6 273 aa18.46■□□□□ 0.55
TSPAN3-208ENST00000560514 SLC28A2O43868 658 aa18.46■□□□□ 0.55
TSPAN3-208ENST00000560514 ACSL4O60488 711 aa18.46■□□□□ 0.55
TSPAN3-208ENST00000560514 ERVPABLB-1P60509 514 aa18.46■□□□□ 0.55
TSPAN3-208ENST00000560514 PPP3CAQ08209 521 aa18.46■□□□□ 0.55
TSPAN3-208ENST00000560514 BST2Q10589 180 aaKnown RBP18.46■□□□□ 0.55
TSPAN3-208ENST00000560514 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP18.46■□□□□ 0.55
TSPAN3-208ENST00000560514 BHLHA9Q7RTU4 235 aa18.46■□□□□ 0.55
TSPAN3-208ENST00000560514 KANSL1Q7Z3B3 1105 aa18.46■□□□□ 0.55
TSPAN3-208ENST00000560514 GRAMD1CQ8IYS0 662 aa18.46■□□□□ 0.55
TSPAN3-208ENST00000560514 STK40Q8N2I9 435 aa18.46■□□□□ 0.55
TSPAN3-208ENST00000560514 TATDN2Q93075 761 aa18.46■□□□□ 0.55
TSPAN3-208ENST00000560514 HIC2Q96JB3 615 aa18.46■□□□□ 0.55
TSPAN3-208ENST00000560514 MRGPRX3Q96LB0 322 aa18.46■□□□□ 0.55
TSPAN3-208ENST00000560514 DPH1Q9BZG8 443 aa18.46■□□□□ 0.55
TSPAN3-208ENST00000560514 TMEM8AQ9HCN3 771 aa18.46■□□□□ 0.55
TSPAN3-208ENST00000560514 TSPAN16Q9UKR8 245 aa18.46■□□□□ 0.55
TSPAN3-208ENST00000560514 DMTF1Q9Y222 760 aa18.46■□□□□ 0.55
TSPAN3-208ENST00000560514 PYCARD-AS1I3L0S3 204 aa18.45■□□□□ 0.54
TSPAN3-208ENST00000560514 TULP2O00295 520 aa18.45■□□□□ 0.54
TSPAN3-208ENST00000560514 LATO43561 262 aa18.45■□□□□ 0.54
TSPAN3-208ENST00000560514 USP12O75317 370 aa18.45■□□□□ 0.54
TSPAN3-208ENST00000560514 NR2F2P24468 414 aa18.45■□□□□ 0.54
TSPAN3-208ENST00000560514 MAT2AP31153 395 aaKnown RBP18.45■□□□□ 0.54
TSPAN3-208ENST00000560514 SLC6A4P31645 630 aa18.45■□□□□ 0.54
TSPAN3-208ENST00000560514 PPP2CBP62714 309 aa18.45■□□□□ 0.54
TSPAN3-208ENST00000560514 PPP2CAP67775 309 aa18.45■□□□□ 0.54
TSPAN3-208ENST00000560514 ECT2LQ008S8 904 aa18.45■□□□□ 0.54
TSPAN3-208ENST00000560514 VAC14Q08AM6 782 aa18.45■□□□□ 0.54
TSPAN3-208ENST00000560514 SGO2Q562F6 1265 aa18.45■□□□□ 0.54
TSPAN3-208ENST00000560514 PITRM1Q5JRX3 1037 aa18.45■□□□□ 0.54
TSPAN3-208ENST00000560514 KRT39Q6A163 491 aa18.45■□□□□ 0.54
TSPAN3-208ENST00000560514 ATL3Q6DD88 541 aa18.45■□□□□ 0.54
TSPAN3-208ENST00000560514 FAM186BQ8IYM0 893 aa18.45■□□□□ 0.54
TSPAN3-208ENST00000560514 SEMA4CQ9C0C4 833 aa18.45■□□□□ 0.54
TSPAN3-208ENST00000560514 ABCG4Q9H172 646 aa18.45■□□□□ 0.54
TSPAN3-208ENST00000560514 KDM4CQ9H3R0 1056 aa18.45■□□□□ 0.54
TSPAN3-208ENST00000560514 CNGB3Q9NQW8 809 aa18.45■□□□□ 0.54
TSPAN3-208ENST00000560514 THSD1Q9NS62 852 aa18.45■□□□□ 0.54
TSPAN3-208ENST00000560514 EVA1BQ9NVM1 165 aa18.45■□□□□ 0.54
TSPAN3-208ENST00000560514 INTS6Q9UL03 887 aaKnown RBP18.45■□□□□ 0.54
TSPAN3-208ENST00000560514 NYNRINQ9P2P1 1898 aaKnown RBP18.45■□□□□ 0.54
TSPAN3-208ENST00000560514 TRIM38O00635 465 aa18.44■□□□□ 0.54
TSPAN3-208ENST00000560514 WISP1O95388 367 aa18.44■□□□□ 0.54
TSPAN3-208ENST00000560514 ALPPL2P10696 532 aa18.44■□□□□ 0.54
TSPAN3-208ENST00000560514 LCP1P13796 627 aa18.44■□□□□ 0.54
TSPAN3-208ENST00000560514 CD19P15391 556 aa18.44■□□□□ 0.54
TSPAN3-208ENST00000560514 RPL13P26373 211 aaKnown RBP18.44■□□□□ 0.54
TSPAN3-208ENST00000560514 MZF1P28698 734 aaPredicted RBP18.44■□□□□ 0.54
TSPAN3-208ENST00000560514 LSSP48449 732 aa18.44■□□□□ 0.54
TSPAN3-208ENST00000560514 TBX4P57082 545 aa18.44■□□□□ 0.54
TSPAN3-208ENST00000560514 ELAVL3Q14576 367 aaKnown RBP18.44■□□□□ 0.54
TSPAN3-208ENST00000560514 FAM133BQ5BKY9 247 aaKnown RBP18.44■□□□□ 0.54
TSPAN3-208ENST00000560514 MSANTD2Q6P1R3 559 aa18.44■□□□□ 0.54
TSPAN3-208ENST00000560514 TMC6Q7Z403 805 aa18.44■□□□□ 0.54
TSPAN3-208ENST00000560514 DSG4Q86SJ6 1040 aa18.44■□□□□ 0.54
TSPAN3-208ENST00000560514 AZIN2Q96A70 460 aa18.44■□□□□ 0.54
TSPAN3-208ENST00000560514 KLHDC7BQ96G42 594 aa18.44■□□□□ 0.54
TSPAN3-208ENST00000560514 FAM129BQ96TA1 746 aa18.44■□□□□ 0.54
TSPAN3-208ENST00000560514 POLR1BQ9H9Y6 1135 aa18.44■□□□□ 0.54
TSPAN3-208ENST00000560514 TRAF3IP3Q9Y228 551 aa18.44■□□□□ 0.54
TSPAN3-208ENST00000560514 TDRD6O60522 2096 aaKnown RBP18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms