RNA–Protein interactions for RNA: ENST00000560492.1

CDC42BPB-207, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 646 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-207ENST00000560492 ACSL4O60488 711 aa10.88□□□□□ -0.67
CDC42BPB-207ENST00000560492 STX10O60499 249 aa10.88□□□□□ -0.67
CDC42BPB-207ENST00000560492 SDC3O75056 442 aa10.88□□□□□ -0.67
CDC42BPB-207ENST00000560492 IL1BP01584 269 aa10.88□□□□□ -0.67
CDC42BPB-207ENST00000560492 EPB41P11171 864 aaKnown RBP10.88□□□□□ -0.67
CDC42BPB-207ENST00000560492 GLDCP23378 1020 aa10.88□□□□□ -0.67
CDC42BPB-207ENST00000560492 EPHA8P29322 1005 aaPredicted RBP10.88□□□□□ -0.67
CDC42BPB-207ENST00000560492 ACTN2P35609 894 aa10.88□□□□□ -0.67
CDC42BPB-207ENST00000560492 RGS7P49802 495 aa10.88□□□□□ -0.67
CDC42BPB-207ENST00000560492 TBX4P57082 545 aa10.88□□□□□ -0.67
CDC42BPB-207ENST00000560492 YWHAEP62258 255 aaKnown RBP10.88□□□□□ -0.67
CDC42BPB-207ENST00000560492 NUCB2P80303 420 aa10.88□□□□□ -0.67
CDC42BPB-207ENST00000560492 DAB2P98082 770 aa10.88□□□□□ -0.67
CDC42BPB-207ENST00000560492 BNIP3Q12983 259 aa10.88□□□□□ -0.67
CDC42BPB-207ENST00000560492 HNRNPA1L2Q32P51 320 aaKnown RBP10.88□□□□□ -0.67
CDC42BPB-207ENST00000560492 PIK3R6Q5UE93 754 aa10.88□□□□□ -0.67
CDC42BPB-207ENST00000560492 NUGGCQ68CJ6 796 aa10.88□□□□□ -0.67
CDC42BPB-207ENST00000560492 PM20D1Q6GTS8 502 aa10.88□□□□□ -0.67
CDC42BPB-207ENST00000560492 KDM7AQ6ZMT4 941 aa10.88□□□□□ -0.67
CDC42BPB-207ENST00000560492 OXR1Q8N573 874 aa10.88□□□□□ -0.67
CDC42BPB-207ENST00000560492 SAP25Q8TEE9 199 aa10.88□□□□□ -0.67
CDC42BPB-207ENST00000560492 NRSN2Q9GZP1 204 aa10.88□□□□□ -0.67
CDC42BPB-207ENST00000560492 PRORYQ9H606 182 aa10.88□□□□□ -0.67
CDC42BPB-207ENST00000560492 CFAP45Q9UL16 551 aa10.88□□□□□ -0.67
CDC42BPB-207ENST00000560492 CLCA2Q9UQC9 943 aa10.88□□□□□ -0.67
CDC42BPB-207ENST00000560492 TRAF3IP3Q9Y228 551 aa10.88□□□□□ -0.67
CDC42BPB-207ENST00000560492 DOCK9Q9BZ29 2069 aa10.88□□□□□ -0.67
CDC42BPB-207ENST00000560492 EDDM13A0A1B0GTR0 161 aa10.87□□□□□ -0.67
CDC42BPB-207ENST00000560492 TTC34A8MYJ7 566 aa10.87□□□□□ -0.67
CDC42BPB-207ENST00000560492 TLR4O00206 839 aa10.87□□□□□ -0.67
CDC42BPB-207ENST00000560492 IRAK2O43187 625 aa10.87□□□□□ -0.67
CDC42BPB-207ENST00000560492 C1QL1O75973 258 aa10.87□□□□□ -0.67
CDC42BPB-207ENST00000560492 F13A1P00488 732 aa10.87□□□□□ -0.67
CDC42BPB-207ENST00000560492 SETSIPP0DME0 302 aa10.87□□□□□ -0.67
CDC42BPB-207ENST00000560492 ZSCAN22P10073 491 aaPredicted RBP10.87□□□□□ -0.67
CDC42BPB-207ENST00000560492 PLA2G2AP14555 144 aa10.87□□□□□ -0.67
CDC42BPB-207ENST00000560492 PFKFB1P16118 471 aa10.87□□□□□ -0.67
CDC42BPB-207ENST00000560492 MAT2AP31153 395 aaKnown RBP10.87□□□□□ -0.67
CDC42BPB-207ENST00000560492 SLC6A4P31645 630 aa10.87□□□□□ -0.67
CDC42BPB-207ENST00000560492 GTF2H1P32780 548 aa10.87□□□□□ -0.67
CDC42BPB-207ENST00000560492 NNMTP40261 264 aa10.87□□□□□ -0.67
CDC42BPB-207ENST00000560492 LRMPQ12912 555 aa10.87□□□□□ -0.67
CDC42BPB-207ENST00000560492 BROXQ5VW32 411 aa10.87□□□□□ -0.67
CDC42BPB-207ENST00000560492 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.87□□□□□ -0.67
CDC42BPB-207ENST00000560492 MMS22LQ6ZRQ5 1243 aa10.87□□□□□ -0.67
CDC42BPB-207ENST00000560492 BHLHA9Q7RTU4 235 aa10.87□□□□□ -0.67
CDC42BPB-207ENST00000560492 PRPF39Q86UA1 669 aaKnown RBP10.87□□□□□ -0.67
CDC42BPB-207ENST00000560492 CFAP52Q8N1V2 620 aa10.87□□□□□ -0.67
CDC42BPB-207ENST00000560492 STK40Q8N2I9 435 aa10.87□□□□□ -0.67
CDC42BPB-207ENST00000560492 TMEM174Q8WUU8 243 aa10.87□□□□□ -0.67
CDC42BPB-207ENST00000560492 FGF11Q92914 225 aa10.87□□□□□ -0.67
CDC42BPB-207ENST00000560492 RPL10LQ96L21 214 aaKnown RBP10.87□□□□□ -0.67
CDC42BPB-207ENST00000560492 ORAI3Q9BRQ5 295 aa10.87□□□□□ -0.67
CDC42BPB-207ENST00000560492 MIS12Q9H081 205 aa10.87□□□□□ -0.67
CDC42BPB-207ENST00000560492 EBF2Q9HAK2 575 aa10.87□□□□□ -0.67
CDC42BPB-207ENST00000560492 CNGB3Q9NQW8 809 aa10.87□□□□□ -0.67
CDC42BPB-207ENST00000560492 WDR70Q9NW82 654 aa10.87□□□□□ -0.67
CDC42BPB-207ENST00000560492 FZD4Q9ULV1 537 aa10.87□□□□□ -0.67
CDC42BPB-207ENST00000560492 ERVW-1Q9UQF0 538 aa10.87□□□□□ -0.67
CDC42BPB-207ENST00000560492 HELZ2Q9BYK8 2649 aaKnown RBP10.86□□□□□ -0.67
CDC42BPB-207ENST00000560492 TEX51A0A1B0GUA7 166 aa10.86□□□□□ -0.67
CDC42BPB-207ENST00000560492 M0QYV0 167 aa10.86□□□□□ -0.67
CDC42BPB-207ENST00000560492 WNT9AO14904 365 aa10.86□□□□□ -0.67
CDC42BPB-207ENST00000560492 MAGEC1O60732 1142 aa10.86□□□□□ -0.67
CDC42BPB-207ENST00000560492 ADH1BP00325 375 aa10.86□□□□□ -0.67
CDC42BPB-207ENST00000560492 LTFP02788 710 aa10.86□□□□□ -0.67
CDC42BPB-207ENST00000560492 VDRP11473 427 aa10.86□□□□□ -0.67
CDC42BPB-207ENST00000560492 GOT1P17174 413 aa10.86□□□□□ -0.67
CDC42BPB-207ENST00000560492 CKMT2P17540 419 aa10.86□□□□□ -0.67
CDC42BPB-207ENST00000560492 CTSOP43234 321 aaPredicted RBP10.86□□□□□ -0.67
CDC42BPB-207ENST00000560492 CCR5P51681 352 aa10.86□□□□□ -0.67
CDC42BPB-207ENST00000560492 ADPRHP54922 357 aa10.86□□□□□ -0.67
CDC42BPB-207ENST00000560492 NXPH1P58417 271 aa10.86□□□□□ -0.67
CDC42BPB-207ENST00000560492 DAOAP59103 153 aa10.86□□□□□ -0.67
CDC42BPB-207ENST00000560492 RPS24P62847 133 aaKnown RBP10.86□□□□□ -0.67
CDC42BPB-207ENST00000560492 ECT2LQ008S8 904 aa10.86□□□□□ -0.67
CDC42BPB-207ENST00000560492 CFHR1Q03591 330 aa10.86□□□□□ -0.67
CDC42BPB-207ENST00000560492 DNM1Q05193 864 aaKnown RBP10.86□□□□□ -0.67
CDC42BPB-207ENST00000560492 CUL2Q13617 745 aa10.86□□□□□ -0.67
CDC42BPB-207ENST00000560492 KCNJ12Q14500 433 aa10.86□□□□□ -0.67
CDC42BPB-207ENST00000560492 RTP5Q14D33 572 aa10.86□□□□□ -0.67
CDC42BPB-207ENST00000560492 SHBQ15464 509 aa10.86□□□□□ -0.67
CDC42BPB-207ENST00000560492 POM121L1PQ3SYA9 428 aa10.86□□□□□ -0.67
CDC42BPB-207ENST00000560492 PITRM1Q5JRX3 1037 aa10.86□□□□□ -0.67
CDC42BPB-207ENST00000560492 MPP7Q5T2T1 576 aa10.86□□□□□ -0.67
CDC42BPB-207ENST00000560492 NAPEPLDQ6IQ20 393 aa10.86□□□□□ -0.67
CDC42BPB-207ENST00000560492 FBXL19Q6PCT2 694 aa10.86□□□□□ -0.67
CDC42BPB-207ENST00000560492 KIAA0907Q7Z7F0 614 aaPredicted RBP10.86□□□□□ -0.67
CDC42BPB-207ENST00000560492 ZNF843Q8N446 348 aa10.86□□□□□ -0.67
CDC42BPB-207ENST00000560492 ZNF454Q8N9F8 522 aa10.86□□□□□ -0.67
CDC42BPB-207ENST00000560492 SNIP1Q8TAD8 396 aaKnown RBP10.86□□□□□ -0.67
CDC42BPB-207ENST00000560492 FIBINQ8TAL6 211 aa10.86□□□□□ -0.67
CDC42BPB-207ENST00000560492 FAM149B1Q96BN6 582 aa10.86□□□□□ -0.67
CDC42BPB-207ENST00000560492 PRICKLE1Q96MT3 831 aaPredicted RBP10.86□□□□□ -0.67
CDC42BPB-207ENST00000560492 MYOCQ99972 504 aa10.86□□□□□ -0.67
CDC42BPB-207ENST00000560492 USP25Q9UHP3 1055 aa10.86□□□□□ -0.67
CDC42BPB-207ENST00000560492 STOML2Q9UJZ1 356 aa10.86□□□□□ -0.67
CDC42BPB-207ENST00000560492 KALRNO60229 2985 aa10.86□□□□□ -0.67
CDC42BPB-207ENST00000560492 PTPRQQ9UMZ3 2332 aa10.85□□□□□ -0.67
CDC42BPB-207ENST00000560492 A0A1W2PR77 199 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms