RNA–Protein interactions for RNA: ENST00000560369.5

LRRC49-223, Transcript of leucine rich repeat containing 49, human

APPRIS ALT1 TSL 2 BASIC

Gene LRRC49, Length 2,586 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LRRC49-223	ENST00000560369	RNPEPL1	Q9HAU8	725 aa		5.92	□□□□□ -1.46
LRRC49-223	ENST00000560369	SSU72	Q9NP77	194 aa	Known RBP	5.92	□□□□□ -1.46
LRRC49-223	ENST00000560369	DDIT4	Q9NX09	232 aa		5.92	□□□□□ -1.46
LRRC49-223	ENST00000560369	PCDH10	Q9P2E7	1040 aa		5.92	□□□□□ -1.46
LRRC49-223	ENST00000560369	ZFP69B	Q9UJL9	534 aa		5.92	□□□□□ -1.46
LRRC49-223	ENST00000560369	PDE4DIP	Q5VU43	2346 aa		5.92	□□□□□ -1.46
LRRC49-223	ENST00000560369	FRMPD3	Q5JV73	1810 aa		5.92	□□□□□ -1.46
LRRC49-223	ENST00000560369	C2CD2L	O14523	706 aa		5.92	□□□□□ -1.46
LRRC49-223	ENST00000560369	TPP1	O14773	563 aa		5.92	□□□□□ -1.46
LRRC49-223	ENST00000560369	TNPO2	O14787	897 aa	Known RBP	5.92	□□□□□ -1.46
LRRC49-223	ENST00000560369	TM9SF1	O15321	606 aa		5.92	□□□□□ -1.46
LRRC49-223	ENST00000560369	MSI1	O43347	362 aa	Known RBP	5.92	□□□□□ -1.46
LRRC49-223	ENST00000560369	FAM200B	P0CF97	657 aa		5.92	□□□□□ -1.46
LRRC49-223	ENST00000560369	TPBGL	P0DKB5	382 aa		5.92	□□□□□ -1.46
LRRC49-223	ENST00000560369	TPSB2	P20231	275 aa		5.92	□□□□□ -1.46
LRRC49-223	ENST00000560369	CALB2	P22676	271 aa		5.92	□□□□□ -1.46
LRRC49-223	ENST00000560369	PTPN3	P26045	913 aa		5.92	□□□□□ -1.46
LRRC49-223	ENST00000560369	AXL	P30530	894 aa		5.92	□□□□□ -1.46
LRRC49-223	ENST00000560369	CPT1A	P50416	773 aa		5.92	□□□□□ -1.46
LRRC49-223	ENST00000560369	NIPAL4	Q0D2K0	466 aa		5.92	□□□□□ -1.46
LRRC49-223	ENST00000560369	SEMA3B	Q13214	749 aa		5.92	□□□□□ -1.46
LRRC49-223	ENST00000560369	PDE1C	Q14123	709 aa	Predicted RBP	5.92	□□□□□ -1.46
LRRC49-223	ENST00000560369	TPSAB1	Q15661	275 aa		5.92	□□□□□ -1.46
LRRC49-223	ENST00000560369	EML3	Q32P44	896 aa		5.92	□□□□□ -1.46
LRRC49-223	ENST00000560369	TEX44	Q53QW1	395 aa		5.92	□□□□□ -1.46
LRRC49-223	ENST00000560369	ARTN	Q5T4W7	220 aa		5.92	□□□□□ -1.46
LRRC49-223	ENST00000560369	DSTYK	Q6XUX3	929 aa		5.92	□□□□□ -1.46
LRRC49-223	ENST00000560369	OTOP3	Q7RTS5	596 aa		5.92	□□□□□ -1.46
LRRC49-223	ENST00000560369	PID1	Q7Z2X4	250 aa		5.92	□□□□□ -1.46
LRRC49-223	ENST00000560369	TOP6BL	Q8N6T0	577 aa		5.92	□□□□□ -1.46
LRRC49-223	ENST00000560369	UCMA	Q8WVF2	138 aa		5.92	□□□□□ -1.46
LRRC49-223	ENST00000560369	MYLPF	Q96A32	169 aa		5.92	□□□□□ -1.46
LRRC49-223	ENST00000560369	GRAMD1A	Q96CP6	724 aa		5.92	□□□□□ -1.46
LRRC49-223	ENST00000560369	MFSD3	Q96ES6	412 aa		5.92	□□□□□ -1.46
LRRC49-223	ENST00000560369	TNIP3	Q96KP6	325 aa		5.92	□□□□□ -1.46
LRRC49-223	ENST00000560369	RAB3IP	Q96QF0	476 aa	Predicted RBP	5.92	□□□□□ -1.46
LRRC49-223	ENST00000560369	NMUR2	Q9GZQ4	415 aa		5.92	□□□□□ -1.46
LRRC49-223	ENST00000560369	DENND2D	Q9H6A0	471 aa	Predicted RBP	5.92	□□□□□ -1.46
LRRC49-223	ENST00000560369	XPNPEP3	Q9NQH7	507 aa		5.92	□□□□□ -1.46
LRRC49-223	ENST00000560369	TXLNG	Q9NUQ3	528 aa		5.92	□□□□□ -1.46
LRRC49-223	ENST00000560369	FNDC1	Q4ZHG4	1894 aa	Predicted RBP	5.91	□□□□□ -1.46
LRRC49-223	ENST00000560369	ZC3H11B	A0A1B0GUI2	810 aa	Predicted RBP	5.91	□□□□□ -1.46
LRRC49-223	ENST00000560369	CAPN9	O14815	690 aa		5.91	□□□□□ -1.46
LRRC49-223	ENST00000560369	TH	P07101	528 aa		5.91	□□□□□ -1.46
LRRC49-223	ENST00000560369	SRGAP2B	P0DMP2	458 aa		5.91	□□□□□ -1.46
LRRC49-223	ENST00000560369	CCND3	P30281	292 aa	Predicted RBP	5.91	□□□□□ -1.46
LRRC49-223	ENST00000560369	THPO	P40225	353 aa		5.91	□□□□□ -1.46
LRRC49-223	ENST00000560369	CCNF	P41002	786 aa		5.91	□□□□□ -1.46
LRRC49-223	ENST00000560369	ACADSB	P45954	432 aa		5.91	□□□□□ -1.46
LRRC49-223	ENST00000560369	CCR10	P46092	362 aa		5.91	□□□□□ -1.46
LRRC49-223	ENST00000560369	PTDSS1	P48651	473 aa	Known RBP	5.91	□□□□□ -1.46
LRRC49-223	ENST00000560369	GPR15	P49685	360 aa		5.91	□□□□□ -1.46
LRRC49-223	ENST00000560369	ARFIP2	P53365	341 aa		5.91	□□□□□ -1.46
LRRC49-223	ENST00000560369	MXRA7	P84157	204 aa		5.91	□□□□□ -1.46
LRRC49-223	ENST00000560369	IRF9	Q00978	393 aa		5.91	□□□□□ -1.46
LRRC49-223	ENST00000560369	CCDC15	Q0P6D6	951 aa		5.91	□□□□□ -1.46
LRRC49-223	ENST00000560369	SETDB1	Q15047	1291 aa		5.91	□□□□□ -1.46
LRRC49-223	ENST00000560369	UPP1	Q16831	310 aa		5.91	□□□□□ -1.46
LRRC49-223	ENST00000560369	PACS1	Q6VY07	963 aa		5.91	□□□□□ -1.46
LRRC49-223	ENST00000560369	KDELC2	Q7Z4H8	507 aa		5.91	□□□□□ -1.46
LRRC49-223	ENST00000560369	TAC4	Q86UU9	113 aa		5.91	□□□□□ -1.46
LRRC49-223	ENST00000560369	IFNL1	Q8IU54	200 aa		5.91	□□□□□ -1.46
LRRC49-223	ENST00000560369	ARID3B	Q8IVW6	561 aa	Predicted RBP	5.91	□□□□□ -1.46
LRRC49-223	ENST00000560369	SPATA22	Q8NHS9	363 aa		5.91	□□□□□ -1.46
LRRC49-223	ENST00000560369	ZSCAN18	Q8TBC5	510 aa	Predicted RBP	5.91	□□□□□ -1.46
LRRC49-223	ENST00000560369	GPR152	Q8TDT2	470 aa		5.91	□□□□□ -1.46
LRRC49-223	ENST00000560369	SKA1	Q96BD8	255 aa		5.91	□□□□□ -1.46
LRRC49-223	ENST00000560369	CADM1	Q9BY67	442 aa	Known RBP	5.91	□□□□□ -1.46
LRRC49-223	ENST00000560369	UNK	Q9C0B0	810 aa	Known RBP	5.91	□□□□□ -1.46
LRRC49-223	ENST00000560369	SENP6	Q9GZR1	1112 aa	Predicted RBP	5.91	□□□□□ -1.46
LRRC49-223	ENST00000560369	TKTL2	Q9H0I9	626 aa		5.91	□□□□□ -1.46
LRRC49-223	ENST00000560369	SIK2	Q9H0K1	926 aa		5.91	□□□□□ -1.46
LRRC49-223	ENST00000560369	LRMDA	Q9H2I8	198 aa		5.91	□□□□□ -1.46
LRRC49-223	ENST00000560369	TRMT13	Q9NUP7	481 aa	Known RBP	5.91	□□□□□ -1.46
LRRC49-223	ENST00000560369	TMEM216	Q9P0N5	145 aa		5.91	□□□□□ -1.46
LRRC49-223	ENST00000560369	SFMBT1	Q9UHJ3	866 aa		5.91	□□□□□ -1.46
LRRC49-223	ENST00000560369	PADI3	Q9ULW8	664 aa		5.91	□□□□□ -1.46
LRRC49-223	ENST00000560369	TTC24	A2A3L6	582 aa	Predicted RBP	5.91	□□□□□ -1.46
LRRC49-223	ENST00000560369	ATP9B	O43861	1147 aa		5.91	□□□□□ -1.46
LRRC49-223	ENST00000560369	SMIM24	O75264	130 aa		5.91	□□□□□ -1.46
LRRC49-223	ENST00000560369	B3GAT3	O94766	335 aa		5.91	□□□□□ -1.46
LRRC49-223	ENST00000560369	LRIG2	O94898	1065 aa		5.91	□□□□□ -1.46
LRRC49-223	ENST00000560369	GNAT1	P11488	350 aa		5.91	□□□□□ -1.46
LRRC49-223	ENST00000560369	ELN	P15502	786 aa		5.91	□□□□□ -1.46
LRRC49-223	ENST00000560369	TSHR	P16473	764 aa		5.91	□□□□□ -1.46
LRRC49-223	ENST00000560369	NFKB1	P19838	968 aa		5.91	□□□□□ -1.46
LRRC49-223	ENST00000560369	PNPLA4	P41247	253 aa		5.91	□□□□□ -1.46
LRRC49-223	ENST00000560369	NR2C2	P49116	596 aa		5.91	□□□□□ -1.46
LRRC49-223	ENST00000560369	CCNG1	P51959	295 aa		5.91	□□□□□ -1.46
LRRC49-223	ENST00000560369	TMPRSS15	P98073	1019 aa		5.91	□□□□□ -1.46
LRRC49-223	ENST00000560369	MGAT3	Q09327	533 aa		5.91	□□□□□ -1.46
LRRC49-223	ENST00000560369	ITGA7	Q13683	1181 aa		5.91	□□□□□ -1.46
LRRC49-223	ENST00000560369	UBAP2L	Q14157	1087 aa	Known RBP	5.91	□□□□□ -1.46
LRRC49-223	ENST00000560369	PPP2R5D	Q14738	602 aa		5.91	□□□□□ -1.46
LRRC49-223	ENST00000560369	PAFAH1B3	Q15102	231 aa	Known RBP	5.91	□□□□□ -1.46
LRRC49-223	ENST00000560369	KHDC1	Q4VXA5	237 aa	Known RBP	5.91	□□□□□ -1.46
LRRC49-223	ENST00000560369	NOMO2	Q5JPE7	1267 aa		5.91	□□□□□ -1.46
LRRC49-223	ENST00000560369	N4BP2L1	Q5TBK1	243 aa	Predicted RBP	5.91	□□□□□ -1.46
LRRC49-223	ENST00000560369	VWA5B1	Q5TIE3	1220 aa		5.91	□□□□□ -1.46
LRRC49-223	ENST00000560369	RNF220	Q5VTB9	566 aa		5.91	□□□□□ -1.46

Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms