RNA–Protein interactions for RNA: ENST00000560127.1

RABGGTA-213, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-213ENST00000560127 GOLGA6L7A0A1B0GV03 622 aa13.29□□□□□ -0.28
RABGGTA-213ENST00000560127 A0A1W2PNU3 283 aaPredicted RBP13.29□□□□□ -0.28
RABGGTA-213ENST00000560127 TARSL2A2RTX5 802 aaKnown RBP13.29□□□□□ -0.28
RABGGTA-213ENST00000560127 TBC1D3FA6NER0 549 aaPredicted RBP13.29□□□□□ -0.28
RABGGTA-213ENST00000560127 TTC34A8MYJ7 566 aa13.29□□□□□ -0.28
RABGGTA-213ENST00000560127 TBC1D3LB9A6J9 549 aa13.29□□□□□ -0.28
RABGGTA-213ENST00000560127 MSI1O43347 362 aaKnown RBP13.29□□□□□ -0.28
RABGGTA-213ENST00000560127 ZBED1O96006 694 aa13.29□□□□□ -0.28
RABGGTA-213ENST00000560127 TBC1D3HP0C7X1 549 aa13.29□□□□□ -0.28
RABGGTA-213ENST00000560127 GIMD1P0DJR0 217 aa13.29□□□□□ -0.28
RABGGTA-213ENST00000560127 CKMT1AP12532 417 aa13.29□□□□□ -0.28
RABGGTA-213ENST00000560127 DGKAP23743 735 aa13.29□□□□□ -0.28
RABGGTA-213ENST00000560127 CASP1P29466 404 aa13.29□□□□□ -0.28
RABGGTA-213ENST00000560127 SLC6A4P31645 630 aa13.29□□□□□ -0.28
RABGGTA-213ENST00000560127 CTSOP43234 321 aaPredicted RBP13.29□□□□□ -0.28
RABGGTA-213ENST00000560127 TKTL1P51854 596 aa13.29□□□□□ -0.28
RABGGTA-213ENST00000560127 AMPD3Q01432 767 aa13.29□□□□□ -0.28
RABGGTA-213ENST00000560127 NFATC3Q12968 1075 aa13.29□□□□□ -0.28
RABGGTA-213ENST00000560127 SLC39A14Q15043 492 aa13.29□□□□□ -0.28
RABGGTA-213ENST00000560127 ZNF394Q53GI3 561 aa13.29□□□□□ -0.28
RABGGTA-213ENST00000560127 TBC1D3GQ6DHY5 549 aa13.29□□□□□ -0.28
RABGGTA-213ENST00000560127 TBC1D3CQ6IPX1 549 aa13.29□□□□□ -0.28
RABGGTA-213ENST00000560127 TBC1D3Q8IZP1 549 aaPredicted RBP13.29□□□□□ -0.28
RABGGTA-213ENST00000560127 EXD3Q8N9H8 876 aa13.29□□□□□ -0.28
RABGGTA-213ENST00000560127 OR4C6Q8NH72 309 aa13.29□□□□□ -0.28
RABGGTA-213ENST00000560127 DHX58Q96C10 678 aa13.29□□□□□ -0.28
RABGGTA-213ENST00000560127 USP28Q96RU2 1077 aa13.29□□□□□ -0.28
RABGGTA-213ENST00000560127 CAAP1Q9H8G2 361 aa13.29□□□□□ -0.28
RABGGTA-213ENST00000560127 OLA1Q9NTK5 396 aaKnown RBP13.29□□□□□ -0.28
RABGGTA-213ENST00000560127 TERTO14746 1132 aaKnown RBP13.28□□□□□ -0.28
RABGGTA-213ENST00000560127 IKBKBO14920 756 aa13.28□□□□□ -0.28
RABGGTA-213ENST00000560127 FFAR2O15552 330 aa13.28□□□□□ -0.28
RABGGTA-213ENST00000560127 MAGEC1O60732 1142 aa13.28□□□□□ -0.28
RABGGTA-213ENST00000560127 ASLP04424 464 aa13.28□□□□□ -0.28
RABGGTA-213ENST00000560127 MYF5P13349 255 aa13.28□□□□□ -0.28
RABGGTA-213ENST00000560127 C5AR1P21730 350 aa13.28□□□□□ -0.28
RABGGTA-213ENST00000560127 MAT2AP31153 395 aaKnown RBP13.28□□□□□ -0.28
RABGGTA-213ENST00000560127 DRD3P35462 400 aa13.28□□□□□ -0.28
RABGGTA-213ENST00000560127 METAP1P53582 386 aa13.28□□□□□ -0.28
RABGGTA-213ENST00000560127 OVGP1Q12889 678 aa13.28□□□□□ -0.28
RABGGTA-213ENST00000560127 FAM133BQ5BKY9 247 aaKnown RBP13.28□□□□□ -0.28
RABGGTA-213ENST00000560127 IGF2-ASQ6U949 168 aa13.28□□□□□ -0.28
RABGGTA-213ENST00000560127 TMC6Q7Z403 805 aa13.28□□□□□ -0.28
RABGGTA-213ENST00000560127 PRPF39Q86UA1 669 aaKnown RBP13.28□□□□□ -0.28
RABGGTA-213ENST00000560127 SLC9A9Q8IVB4 645 aa13.28□□□□□ -0.28
RABGGTA-213ENST00000560127 MFN1Q8IWA4 741 aa13.28□□□□□ -0.28
RABGGTA-213ENST00000560127 STK40Q8N2I9 435 aa13.28□□□□□ -0.28
RABGGTA-213ENST00000560127 KDM1BQ8NB78 822 aa13.28□□□□□ -0.28
RABGGTA-213ENST00000560127 FIBINQ8TAL6 211 aa13.28□□□□□ -0.28
RABGGTA-213ENST00000560127 GOLGA5Q8TBA6 731 aa13.28□□□□□ -0.28
RABGGTA-213ENST00000560127 TMC2Q8TDI7 906 aa13.28□□□□□ -0.28
RABGGTA-213ENST00000560127 EDEM1Q92611 657 aa13.28□□□□□ -0.28
RABGGTA-213ENST00000560127 FAM131CQ96AQ9 280 aa13.28□□□□□ -0.28
RABGGTA-213ENST00000560127 HEXIM2Q96MH2 286 aaKnown RBP13.28□□□□□ -0.28
RABGGTA-213ENST00000560127 FAM117AQ9C073 453 aa13.28□□□□□ -0.28
RABGGTA-213ENST00000560127 NIF3L1Q9GZT8 377 aa13.28□□□□□ -0.28
RABGGTA-213ENST00000560127 CUEDC2Q9H467 287 aa13.28□□□□□ -0.28
RABGGTA-213ENST00000560127 STIM2Q9P246 746 aa13.28□□□□□ -0.28
RABGGTA-213ENST00000560127 CYTH4Q9UIA0 394 aa13.28□□□□□ -0.28
RABGGTA-213ENST00000560127 SLCO3A1Q9UIG8 710 aa13.28□□□□□ -0.28
RABGGTA-213ENST00000560127 SATB2Q9UPW6 733 aa13.28□□□□□ -0.28
RABGGTA-213ENST00000560127 ERVW-1Q9UQF0 538 aa13.28□□□□□ -0.28
RABGGTA-213ENST00000560127 CA5BQ9Y2D0 317 aa13.28□□□□□ -0.28
RABGGTA-213ENST00000560127 SCN8AQ9UQD0 1980 aa13.28□□□□□ -0.28
RABGGTA-213ENST00000560127 ITIH6Q6UXX5 1313 aa13.28□□□□□ -0.28
RABGGTA-213ENST00000560127 ICE1Q9Y2F5 2266 aa13.28□□□□□ -0.28
RABGGTA-213ENST00000560127 LY6G6EA0A0G2JKS1 128 aa13.27□□□□□ -0.29
RABGGTA-213ENST00000560127 EDDM13A0A1B0GTR0 161 aa13.27□□□□□ -0.29
RABGGTA-213ENST00000560127 TULP2O00295 520 aa13.27□□□□□ -0.29
RABGGTA-213ENST00000560127 LZTS3O60299 673 aaPredicted RBP13.27□□□□□ -0.29
RABGGTA-213ENST00000560127 ADH1BP00325 375 aa13.27□□□□□ -0.29
RABGGTA-213ENST00000560127 MZF1P28698 734 aaPredicted RBP13.27□□□□□ -0.29
RABGGTA-213ENST00000560127 PKP1Q13835 747 aa13.27□□□□□ -0.29
RABGGTA-213ENST00000560127 C3orf38Q5JPI3 329 aa13.27□□□□□ -0.29
RABGGTA-213ENST00000560127 BSPRYQ5W0U4 402 aa13.27□□□□□ -0.29
RABGGTA-213ENST00000560127 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.27□□□□□ -0.29
RABGGTA-213ENST00000560127 MMS22LQ6ZRQ5 1243 aa13.27□□□□□ -0.29
RABGGTA-213ENST00000560127 SLC4A11Q8NBS3 891 aa13.27□□□□□ -0.29
RABGGTA-213ENST00000560127 TAS1R2Q8TE23 839 aa13.27□□□□□ -0.29
RABGGTA-213ENST00000560127 RNF139Q8WU17 664 aa13.27□□□□□ -0.29
RABGGTA-213ENST00000560127 TMEM174Q8WUU8 243 aa13.27□□□□□ -0.29
RABGGTA-213ENST00000560127 PTPRN2Q92932 1015 aa13.27□□□□□ -0.29
RABGGTA-213ENST00000560127 MYEOVQ96EZ4 313 aa13.27□□□□□ -0.29
RABGGTA-213ENST00000560127 PRR11Q96HE9 360 aaPredicted RBP13.27□□□□□ -0.29
RABGGTA-213ENST00000560127 PRICKLE1Q96MT3 831 aaPredicted RBP13.27□□□□□ -0.29
RABGGTA-213ENST00000560127 SLC46A1Q96NT5 459 aa13.27□□□□□ -0.29
RABGGTA-213ENST00000560127 IRX2Q9BZI1 471 aaPredicted RBP13.27□□□□□ -0.29
RABGGTA-213ENST00000560127 OSBPL2Q9H1P3 480 aa13.27□□□□□ -0.29
RABGGTA-213ENST00000560127 BLZF1Q9H2G9 400 aa13.27□□□□□ -0.29
RABGGTA-213ENST00000560127 DMTF1Q9Y222 760 aa13.27□□□□□ -0.29
RABGGTA-213ENST00000560127 HEMK1Q9Y5R4 338 aaPredicted RBP13.27□□□□□ -0.29
RABGGTA-213ENST00000560127 U3KQA8 63 aa13.27□□□□□ -0.29
RABGGTA-213ENST00000560127 YJEFN3A6XGL0 299 aa13.26□□□□□ -0.29
RABGGTA-213ENST00000560127 E7ENQ6 273 aa13.26□□□□□ -0.29
RABGGTA-213ENST00000560127 IRAK2O43187 625 aa13.26□□□□□ -0.29
RABGGTA-213ENST00000560127 RTN2O75298 545 aa13.26□□□□□ -0.29
RABGGTA-213ENST00000560127 IL1BP01584 269 aa13.26□□□□□ -0.29
RABGGTA-213ENST00000560127 IGLV3-27P01718 113 aa13.26□□□□□ -0.29
RABGGTA-213ENST00000560127 GP1BAP07359 652 aa13.26□□□□□ -0.29
RABGGTA-213ENST00000560127 SRPRAP08240 638 aaKnown RBP13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms