RNA–Protein interactions for RNA: ENST00000560089.5

SEMA4B-215, Transcript of semaphorin 4B, humanhuman

TSL 1 (best)

Gene SEMA4B, Length 2,804 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-215ENST00000560089 TNIP2Q8NFZ5 429 aa19.58■□□□□ 0.73
SEMA4B-215ENST00000560089 CDRT15Q96T59 188 aa19.58■□□□□ 0.73
SEMA4B-215ENST00000560089 MMP19Q99542 508 aa19.58■□□□□ 0.73
SEMA4B-215ENST00000560089 NEK6Q9HC98 313 aa19.58■□□□□ 0.73
SEMA4B-215ENST00000560089 FAM172BPA6NC97 362 aa19.58■□□□□ 0.72
SEMA4B-215ENST00000560089 TRIM49D1C9J1S8 452 aa19.58■□□□□ 0.72
SEMA4B-215ENST00000560089 DCXO43602 365 aa19.58■□□□□ 0.72
SEMA4B-215ENST00000560089 EIF2B5Q13144 721 aaKnown RBP19.58■□□□□ 0.72
SEMA4B-215ENST00000560089 MAPRE1Q15691 268 aaKnown RBP19.58■□□□□ 0.72
SEMA4B-215ENST00000560089 PPP4R4Q6NUP7 873 aa19.58■□□□□ 0.72
SEMA4B-215ENST00000560089 ARHGEF19Q8IW93 802 aa19.58■□□□□ 0.72
SEMA4B-215ENST00000560089 ATL1Q8WXF7 558 aa19.58■□□□□ 0.72
SEMA4B-215ENST00000560089 COA7Q96BR5 231 aa19.58■□□□□ 0.72
SEMA4B-215ENST00000560089 ZBED3Q96IU2 234 aaPredicted RBP19.58■□□□□ 0.72
SEMA4B-215ENST00000560089 KLHL32Q96NJ5 620 aa19.58■□□□□ 0.72
SEMA4B-215ENST00000560089 REEP2Q9BRK0 252 aa19.58■□□□□ 0.72
SEMA4B-215ENST00000560089 AVENQ9NQS1 362 aaPredicted RBP19.58■□□□□ 0.72
SEMA4B-215ENST00000560089 HACL1Q9UJ83 578 aa19.58■□□□□ 0.72
SEMA4B-215ENST00000560089 LYPLA1O75608 230 aaPredicted RBP19.57■□□□□ 0.72
SEMA4B-215ENST00000560089 CSPG5O95196 566 aa19.57■□□□□ 0.72
SEMA4B-215ENST00000560089 TAL1P17542 331 aaPredicted RBP19.57■□□□□ 0.72
SEMA4B-215ENST00000560089 EEF1DP29692 281 aaKnown RBP19.57■□□□□ 0.72
SEMA4B-215ENST00000560089 ETV3P41162 512 aa19.57■□□□□ 0.72
SEMA4B-215ENST00000560089 MS4A2Q01362 244 aa19.57■□□□□ 0.72
SEMA4B-215ENST00000560089 SMU1Q2TAY7 513 aa19.57■□□□□ 0.72
SEMA4B-215ENST00000560089 BBS9Q3SYG4 887 aa19.57■□□□□ 0.72
SEMA4B-215ENST00000560089 SLC30A10Q6XR72 485 aa19.57■□□□□ 0.72
SEMA4B-215ENST00000560089 BNC2Q6ZN30 1099 aaPredicted RBP19.57■□□□□ 0.72
SEMA4B-215ENST00000560089 TRPM4Q8TD43 1214 aa19.57■□□□□ 0.72
SEMA4B-215ENST00000560089 ACER1Q8TDN7 264 aa19.57■□□□□ 0.72
SEMA4B-215ENST00000560089 DHRS9Q9BPW9 319 aa19.57■□□□□ 0.72
SEMA4B-215ENST00000560089 HMG20AQ9NP66 347 aa19.57■□□□□ 0.72
SEMA4B-215ENST00000560089 SCUBE2Q9NQ36 999 aa19.57■□□□□ 0.72
SEMA4B-215ENST00000560089 HOXC10Q9NYD6 342 aa19.57■□□□□ 0.72
SEMA4B-215ENST00000560089 HTRA2O43464 458 aaPredicted RBP19.57■□□□□ 0.72
SEMA4B-215ENST00000560089 EDIL3O43854 480 aa19.57■□□□□ 0.72
SEMA4B-215ENST00000560089 NPM3O75607 178 aaKnown RBP19.57■□□□□ 0.72
SEMA4B-215ENST00000560089 KCNH1O95259 989 aa19.57■□□□□ 0.72
SEMA4B-215ENST00000560089 COPZ1P61923 177 aa19.57■□□□□ 0.72
SEMA4B-215ENST00000560089 RNF148Q8N7C7 305 aa19.57■□□□□ 0.72
SEMA4B-215ENST00000560089 GIPC2Q8TF65 315 aa19.57■□□□□ 0.72
SEMA4B-215ENST00000560089 ZC3H15Q8WU90 426 aaKnown RBP19.57■□□□□ 0.72
SEMA4B-215ENST00000560089 SLC44A1Q8WWI5 657 aa19.57■□□□□ 0.72
SEMA4B-215ENST00000560089 HAS1Q92839 578 aa19.57■□□□□ 0.72
SEMA4B-215ENST00000560089 SH3YL1Q96HL8 342 aaPredicted RBP19.57■□□□□ 0.72
SEMA4B-215ENST00000560089 ZNF778Q96MU6 729 aa19.57■□□□□ 0.72
SEMA4B-215ENST00000560089 WDR83Q9BRX9 315 aaKnown RBP19.57■□□□□ 0.72
SEMA4B-215ENST00000560089 TRPV6Q9H1D0 765 aa19.57■□□□□ 0.72
SEMA4B-215ENST00000560089 PARVAQ9NVD7 372 aa19.57■□□□□ 0.72
SEMA4B-215ENST00000560089 ARMC1Q9NVT9 282 aa19.57■□□□□ 0.72
SEMA4B-215ENST00000560089 NXF1Q9UBU9 619 aaKnown RBP19.57■□□□□ 0.72
SEMA4B-215ENST00000560089 NOCTQ9UK39 431 aaKnown RBP19.57■□□□□ 0.72
SEMA4B-215ENST00000560089 SPEF1Q9Y4P9 236 aa19.57■□□□□ 0.72
SEMA4B-215ENST00000560089 ARHGAP33O14559 1287 aa19.57■□□□□ 0.72
SEMA4B-215ENST00000560089 DDNO94850 711 aaPredicted RBP19.57■□□□□ 0.72
SEMA4B-215ENST00000560089 SEC24DO94855 1032 aaPredicted RBP19.57■□□□□ 0.72
SEMA4B-215ENST00000560089 KRT6AP02538 564 aa19.57■□□□□ 0.72
SEMA4B-215ENST00000560089 KRT6BP04259 564 aa19.57■□□□□ 0.72
SEMA4B-215ENST00000560089 CD58P19256 250 aa19.57■□□□□ 0.72
SEMA4B-215ENST00000560089 PKNOX1P55347 436 aa19.57■□□□□ 0.72
SEMA4B-215ENST00000560089 MRPS5P82675 430 aaKnown RBP19.57■□□□□ 0.72
SEMA4B-215ENST00000560089 OCA2Q04671 838 aa19.57■□□□□ 0.72
SEMA4B-215ENST00000560089 ELMOD2Q8IZ81 293 aa19.57■□□□□ 0.72
SEMA4B-215ENST00000560089 FEM1CQ96JP0 617 aa19.57■□□□□ 0.72
SEMA4B-215ENST00000560089 SLC29A1Q99808 456 aa19.57■□□□□ 0.72
SEMA4B-215ENST00000560089 GLIS2Q9BZE0 524 aaPredicted RBP19.57■□□□□ 0.72
SEMA4B-215ENST00000560089 LTBP3Q9NS15 1303 aa19.57■□□□□ 0.72
SEMA4B-215ENST00000560089 TGFB1I1O43294 461 aa19.56■□□□□ 0.72
SEMA4B-215ENST00000560089 ASNA1O43681 348 aa19.56■□□□□ 0.72
SEMA4B-215ENST00000560089 KRT3P12035 628 aa19.56■□□□□ 0.72
SEMA4B-215ENST00000560089 SERPINB1P30740 379 aa19.56■□□□□ 0.72
SEMA4B-215ENST00000560089 IDH3AP50213 366 aa19.56■□□□□ 0.72
SEMA4B-215ENST00000560089 PPP2R2BQ00005 443 aa19.56■□□□□ 0.72
SEMA4B-215ENST00000560089 ZNF543Q08ER8 600 aa19.56■□□□□ 0.72
SEMA4B-215ENST00000560089 BMT2Q1RMZ1 405 aa19.56■□□□□ 0.72
SEMA4B-215ENST00000560089 LRIT3Q3SXY7 679 aa19.56■□□□□ 0.72
SEMA4B-215ENST00000560089 C16orf89Q6UX73 402 aa19.56■□□□□ 0.72
SEMA4B-215ENST00000560089 TMEM179Q6ZVK1 233 aa19.56■□□□□ 0.72
SEMA4B-215ENST00000560089 TCF12Q99081 682 aa19.56■□□□□ 0.72
SEMA4B-215ENST00000560089 TMEM117Q9H0C3 514 aa19.56■□□□□ 0.72
SEMA4B-215ENST00000560089 THG1LQ9NWX6 298 aaKnown RBP19.56■□□□□ 0.72
SEMA4B-215ENST00000560089 USP17L10C9JJH3 530 aa19.56■□□□□ 0.72
SEMA4B-215ENST00000560089 IDH3BO43837 385 aa19.56■□□□□ 0.72
SEMA4B-215ENST00000560089 TSPAN9O75954 239 aa19.56■□□□□ 0.72
SEMA4B-215ENST00000560089 BPGMP07738 259 aa19.56■□□□□ 0.72
SEMA4B-215ENST00000560089 TNNI2P48788 182 aa19.56■□□□□ 0.72
SEMA4B-215ENST00000560089 ZNF280AP59817 542 aaPredicted RBP19.56■□□□□ 0.72
SEMA4B-215ENST00000560089 FMO1Q01740 532 aa19.56■□□□□ 0.72
SEMA4B-215ENST00000560089 NEDD8Q15843 81 aa19.56■□□□□ 0.72
SEMA4B-215ENST00000560089 SLFN13Q68D06 897 aa19.56■□□□□ 0.72
SEMA4B-215ENST00000560089 FAM117BQ6P1L5 589 aa19.56■□□□□ 0.72
SEMA4B-215ENST00000560089 NACC1Q96RE7 527 aa19.56■□□□□ 0.72
SEMA4B-215ENST00000560089 CDK5RAP1Q96SZ6 601 aaKnown RBP19.56■□□□□ 0.72
SEMA4B-215ENST00000560089 CFLARO15519 480 aa19.55■□□□□ 0.72
SEMA4B-215ENST00000560089 POTEGQ6S5H5 508 aa19.55■□□□□ 0.72
SEMA4B-215ENST00000560089 PLEKHG7Q6ZR37 379 aa19.55■□□□□ 0.72
SEMA4B-215ENST00000560089 SLC47A2Q86VL8 602 aa19.55■□□□□ 0.72
SEMA4B-215ENST00000560089 ADGRF4Q8IZF3 695 aa19.55■□□□□ 0.72
SEMA4B-215ENST00000560089 MTMR14Q8NCE2 650 aa19.55■□□□□ 0.72
SEMA4B-215ENST00000560089 ZSWIM2Q8NEG5 633 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms