RNA–Protein interactions for RNA: ENST00000559850.5

RABGGTA-211, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-211ENST00000559850 CALB1P05937 261 aa15.3■□□□□ 0.04
RABGGTA-211ENST00000559850 CCDC172P0C7W6 258 aa15.3■□□□□ 0.04
RABGGTA-211ENST00000559850 GPD1P21695 349 aa15.3■□□□□ 0.04
RABGGTA-211ENST00000559850 SDC4P31431 198 aa15.3■□□□□ 0.04
RABGGTA-211ENST00000559850 DHPSP49366 369 aaPredicted RBP15.3■□□□□ 0.04
RABGGTA-211ENST00000559850 STK19P49842 368 aaPredicted RBP15.3■□□□□ 0.04
RABGGTA-211ENST00000559850 COPAP53621 1224 aa15.3■□□□□ 0.04
RABGGTA-211ENST00000559850 CREB5Q02930 508 aa15.3■□□□□ 0.04
RABGGTA-211ENST00000559850 KLHL30Q0D2K2 578 aa15.3■□□□□ 0.04
RABGGTA-211ENST00000559850 SF3A2Q15428 464 aaKnown RBP15.3■□□□□ 0.04
RABGGTA-211ENST00000559850 ELF2Q15723 593 aa15.3■□□□□ 0.04
RABGGTA-211ENST00000559850 PMS2CLQ68D20 193 aa15.3■□□□□ 0.04
RABGGTA-211ENST00000559850 DNAJC24Q6P3W2 148 aa15.3■□□□□ 0.04
RABGGTA-211ENST00000559850 WDR59Q6PJI9 974 aa15.3■□□□□ 0.04
RABGGTA-211ENST00000559850 LRSAM1Q6UWE0 723 aa15.3■□□□□ 0.04
RABGGTA-211ENST00000559850 ZNF683Q8IZ20 524 aa15.3■□□□□ 0.04
RABGGTA-211ENST00000559850 MCOLN2Q8IZK6 566 aa15.3■□□□□ 0.04
RABGGTA-211ENST00000559850 TTC17Q96AE7 1141 aa15.3■□□□□ 0.04
RABGGTA-211ENST00000559850 MYO19Q96H55 970 aa15.3■□□□□ 0.04
RABGGTA-211ENST00000559850 SPACA7Q96KW9 195 aa15.3■□□□□ 0.04
RABGGTA-211ENST00000559850 RPL10LQ96L21 214 aaKnown RBP15.3■□□□□ 0.04
RABGGTA-211ENST00000559850 MRGPRX3Q96LB0 322 aa15.3■□□□□ 0.04
RABGGTA-211ENST00000559850 TMEM245Q9H330 911 aa15.3■□□□□ 0.04
RABGGTA-211ENST00000559850 PRDM16Q9HAZ2 1276 aa15.3■□□□□ 0.04
RABGGTA-211ENST00000559850 SEMA4GQ9NTN9 838 aa15.3■□□□□ 0.04
RABGGTA-211ENST00000559850 AIPL1Q9NZN9 384 aa15.3■□□□□ 0.04
RABGGTA-211ENST00000559850 MPP6Q9NZW5 540 aa15.3■□□□□ 0.04
RABGGTA-211ENST00000559850 ERVW-1Q9UQF0 538 aa15.3■□□□□ 0.04
RABGGTA-211ENST00000559850 GVINP1Q7Z2Y8 2422 aa15.29■□□□□ 0.04
RABGGTA-211ENST00000559850 ATXN2Q99700 1313 aaKnown RBP15.29■□□□□ 0.04
RABGGTA-211ENST00000559850 IGHV1OR15-9A0A0B4J2B8 117 aa15.29■□□□□ 0.04
RABGGTA-211ENST00000559850 A0A1B0GVM2 712 aa15.29■□□□□ 0.04
RABGGTA-211ENST00000559850 TCAF2A6NFQ2 919 aa15.29■□□□□ 0.04
RABGGTA-211ENST00000559850 DDX3XO00571 662 aaKnown RBP eCLIP15.29■□□□□ 0.04
RABGGTA-211ENST00000559850 NPC1O15118 1278 aa15.29■□□□□ 0.04
RABGGTA-211ENST00000559850 SRGAP2O75044 1071 aa15.29■□□□□ 0.04
RABGGTA-211ENST00000559850 ATP5BP06576 529 aaKnown RBP15.29■□□□□ 0.04
RABGGTA-211ENST00000559850 PTGER3P43115 390 aa15.29■□□□□ 0.04
RABGGTA-211ENST00000559850 RPL7AP62424 266 aaKnown RBP15.29■□□□□ 0.04
RABGGTA-211ENST00000559850 C1QBPQ07021 282 aaKnown RBP15.29■□□□□ 0.04
RABGGTA-211ENST00000559850 PLEKHG6Q3KR16 790 aa15.29■□□□□ 0.04
RABGGTA-211ENST00000559850 ARTNQ5T4W7 220 aa15.29■□□□□ 0.04
RABGGTA-211ENST00000559850 TTC39BQ5VTQ0 682 aaPredicted RBP15.29■□□□□ 0.04
RABGGTA-211ENST00000559850 TCEAL6Q6IPX3 200 aa15.29■□□□□ 0.04
RABGGTA-211ENST00000559850 ARCQ7LC44 396 aa15.29■□□□□ 0.04
RABGGTA-211ENST00000559850 TFAP2DQ7Z6R9 452 aa15.29■□□□□ 0.04
RABGGTA-211ENST00000559850 TMPRSS6Q8IU80 811 aa15.29■□□□□ 0.04
RABGGTA-211ENST00000559850 CCDC185Q8N715 623 aa15.29■□□□□ 0.04
RABGGTA-211ENST00000559850 ZNF557Q8N988 423 aaPredicted RBP15.29■□□□□ 0.04
RABGGTA-211ENST00000559850 C3orf20Q8ND61 904 aa15.29■□□□□ 0.04
RABGGTA-211ENST00000559850 FAM172AQ8WUF8 416 aa15.29■□□□□ 0.04
RABGGTA-211ENST00000559850 TCEAL3Q969E4 200 aa15.29■□□□□ 0.04
RABGGTA-211ENST00000559850 MCEEQ96PE7 176 aa15.29■□□□□ 0.04
RABGGTA-211ENST00000559850 SLCO3A1Q9UIG8 710 aa15.29■□□□□ 0.04
RABGGTA-211ENST00000559850 ADAMTS9Q9P2N4 1935 aa15.29■□□□□ 0.04
RABGGTA-211ENST00000559850 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.28■□□□□ 0.04
RABGGTA-211ENST00000559850 SIGLEC16A6NMB1 481 aa15.28■□□□□ 0.04
RABGGTA-211ENST00000559850 TTC34A8MYJ7 566 aa15.28■□□□□ 0.04
RABGGTA-211ENST00000559850 E9PAM4 449 aa15.28■□□□□ 0.04
RABGGTA-211ENST00000559850 CCP110O43303 1012 aa15.28■□□□□ 0.04
RABGGTA-211ENST00000559850 ENDOD1O94919 500 aa15.28■□□□□ 0.04
RABGGTA-211ENST00000559850 PLEKP08567 350 aaPredicted RBP15.28■□□□□ 0.04
RABGGTA-211ENST00000559850 MPLP40238 635 aa15.28■□□□□ 0.04
RABGGTA-211ENST00000559850 PRKCIP41743 596 aa15.28■□□□□ 0.04
RABGGTA-211ENST00000559850 PTPN9P43378 593 aa15.28■□□□□ 0.04
RABGGTA-211ENST00000559850 HDAC4P56524 1084 aa15.28■□□□□ 0.04
RABGGTA-211ENST00000559850 GSCP56915 257 aaPredicted RBP15.28■□□□□ 0.04
RABGGTA-211ENST00000559850 OGDHQ02218 1023 aa15.28■□□□□ 0.04
RABGGTA-211ENST00000559850 RPL6Q02878 288 aaKnown RBP15.28■□□□□ 0.04
RABGGTA-211ENST00000559850 ZNF177Q13360 481 aaPredicted RBP15.28■□□□□ 0.04
RABGGTA-211ENST00000559850 CAMK2GQ13555 558 aaPredicted RBP15.28■□□□□ 0.04
RABGGTA-211ENST00000559850 C5orf22Q49AR2 442 aa15.28■□□□□ 0.04
RABGGTA-211ENST00000559850 FIGNQ5HY92 759 aa15.28■□□□□ 0.04
RABGGTA-211ENST00000559850 PPP1R15BQ5SWA1 713 aa15.28■□□□□ 0.04
RABGGTA-211ENST00000559850 RNF219Q5W0B1 726 aaPredicted RBP15.28■□□□□ 0.04
RABGGTA-211ENST00000559850 FAM124AQ86V42 546 aa15.28■□□□□ 0.04
RABGGTA-211ENST00000559850 NUP58Q9BVL2 599 aa15.28■□□□□ 0.04
RABGGTA-211ENST00000559850 EDEM3Q9BZQ6 932 aa15.28■□□□□ 0.04
RABGGTA-211ENST00000559850 PRSS16Q9NQE7 514 aa15.28■□□□□ 0.04
RABGGTA-211ENST00000559850 PAXBP1Q9Y5B6 917 aa15.28■□□□□ 0.04
RABGGTA-211ENST00000559850 PTPRZ1P23471 2315 aaPredicted RBP15.28■□□□□ 0.04
RABGGTA-211ENST00000559850 CFAP54Q96N23 3096 aa15.27■□□□□ 0.04
RABGGTA-211ENST00000559850 FAM72CH0Y354 149 aa15.27■□□□□ 0.04
RABGGTA-211ENST00000559850 GDF9O60383 454 aa15.27■□□□□ 0.04
RABGGTA-211ENST00000559850 SIN3BO75182 1162 aa15.27■□□□□ 0.04
RABGGTA-211ENST00000559850 MOCS3O95396 460 aa15.27■□□□□ 0.04
RABGGTA-211ENST00000559850 ASLP04424 464 aa15.27■□□□□ 0.04
RABGGTA-211ENST00000559850 GYPCP04921 128 aa15.27■□□□□ 0.04
RABGGTA-211ENST00000559850 VAV1P15498 845 aa15.27■□□□□ 0.04
RABGGTA-211ENST00000559850 ST8SIA6P61647 398 aa15.27■□□□□ 0.04
RABGGTA-211ENST00000559850 ECT2LQ008S8 904 aa15.27■□□□□ 0.04
RABGGTA-211ENST00000559850 CSRP2Q16527 193 aa15.27■□□□□ 0.04
RABGGTA-211ENST00000559850 TDRD12Q587J7 1177 aaKnown RBP15.27■□□□□ 0.04
RABGGTA-211ENST00000559850 FAM72AQ5TYM5 149 aa15.27■□□□□ 0.04
RABGGTA-211ENST00000559850 HGSNATQ68CP4 663 aa15.27■□□□□ 0.04
RABGGTA-211ENST00000559850 FAM72DQ6L9T8 149 aa15.27■□□□□ 0.04
RABGGTA-211ENST00000559850 PRR23CQ6ZRP0 262 aa15.27■□□□□ 0.04
RABGGTA-211ENST00000559850 LPCAT2Q7L5N7 544 aa15.27■□□□□ 0.04
RABGGTA-211ENST00000559850 FAM72BQ86X60 149 aa15.27■□□□□ 0.04
RABGGTA-211ENST00000559850 OR2T3Q8NH03 318 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms