RNA–Protein interactions for RNA: ENST00000559754.1

SPG11-218, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-218ENST00000559754 ITGA5P08648 1049 aa4.19□□□□□ -1.74
SPG11-218ENST00000559754 HSD3B1P14060 373 aa4.19□□□□□ -1.74
SPG11-218ENST00000559754 TNFSF4P23510 183 aa4.19□□□□□ -1.74
SPG11-218ENST00000559754 EEF1GP26641 437 aaKnown RBP4.19□□□□□ -1.74
SPG11-218ENST00000559754 POLD2P49005 469 aa4.19□□□□□ -1.74
SPG11-218ENST00000559754 PGM5Q15124 567 aa4.19□□□□□ -1.74
SPG11-218ENST00000559754 PUM3Q15397 648 aaKnown RBP4.19□□□□□ -1.74
SPG11-218ENST00000559754 SLC35G1Q2M3R5 365 aa4.19□□□□□ -1.74
SPG11-218ENST00000559754 DGKKQ5KSL6 1271 aa4.19□□□□□ -1.74
SPG11-218ENST00000559754 IZUMO3Q5VZ72 239 aa4.19□□□□□ -1.74
SPG11-218ENST00000559754 MSANTD2Q6P1R3 559 aa4.19□□□□□ -1.74
SPG11-218ENST00000559754 PDXDC1Q6P996 788 aa4.19□□□□□ -1.74
SPG11-218ENST00000559754 C16orf89Q6UX73 402 aa4.19□□□□□ -1.74
SPG11-218ENST00000559754 DDIASQ8IXT1 998 aa4.19□□□□□ -1.74
SPG11-218ENST00000559754 PELI3Q8N2H9 469 aa4.19□□□□□ -1.74
SPG11-218ENST00000559754 TMEM199Q8N511 208 aa4.19□□□□□ -1.74
SPG11-218ENST00000559754 PPHLN1Q8NEY8 458 aaKnown RBP4.19□□□□□ -1.74
SPG11-218ENST00000559754 OR52N4Q8NGI2 321 aa4.19□□□□□ -1.74
SPG11-218ENST00000559754 WASF1Q92558 559 aa4.19□□□□□ -1.74
SPG11-218ENST00000559754 LPAR1Q92633 364 aa4.19□□□□□ -1.74
SPG11-218ENST00000559754 MPP4Q96JB8 637 aa4.19□□□□□ -1.74
SPG11-218ENST00000559754 TBATAQ96M53 351 aa4.19□□□□□ -1.74
SPG11-218ENST00000559754 ISCA1Q9BUE6 129 aa4.19□□□□□ -1.74
SPG11-218ENST00000559754 TASP1Q9H6P5 420 aa4.19□□□□□ -1.74
SPG11-218ENST00000559754 MRPL44Q9H9J2 332 aaKnown RBP4.19□□□□□ -1.74
SPG11-218ENST00000559754 ARFGAP3Q9NP61 516 aa4.19□□□□□ -1.74
SPG11-218ENST00000559754 FNIP2Q9P278 1114 aa4.19□□□□□ -1.74
SPG11-218ENST00000559754 NRBP1Q9UHY1 535 aa4.19□□□□□ -1.74
SPG11-218ENST00000559754 NFU1Q9UMS0 254 aa4.19□□□□□ -1.74
SPG11-218ENST00000559754 B3GNT3Q9Y2A9 372 aa4.19□□□□□ -1.74
SPG11-218ENST00000559754 A0A1W2PPC1 479 aa4.18□□□□□ -1.74
SPG11-218ENST00000559754 M0QZQ0 153 aa4.18□□□□□ -1.74
SPG11-218ENST00000559754 SPTLC2O15270 562 aa4.18□□□□□ -1.74
SPG11-218ENST00000559754 DHHO43323 396 aa4.18□□□□□ -1.74
SPG11-218ENST00000559754 ATG13O75143 517 aa4.18□□□□□ -1.74
SPG11-218ENST00000559754 PPP6R2O75170 966 aa4.18□□□□□ -1.74
SPG11-218ENST00000559754 NTSR2O95665 410 aa4.18□□□□□ -1.74
SPG11-218ENST00000559754 ALDOAP04075 364 aaKnown RBP4.18□□□□□ -1.74
SPG11-218ENST00000559754 RFPL3SP0C7P2 107 aa4.18□□□□□ -1.74
SPG11-218ENST00000559754 CIITAP33076 1130 aa4.18□□□□□ -1.74
SPG11-218ENST00000559754 GRK6P43250 576 aa4.18□□□□□ -1.74
SPG11-218ENST00000559754 PPATQ06203 517 aa4.18□□□□□ -1.74
SPG11-218ENST00000559754 SLC4A8Q2Y0W8 1093 aa4.18□□□□□ -1.74
SPG11-218ENST00000559754 PIK3CD-AS1Q5SR53 167 aa4.18□□□□□ -1.74
SPG11-218ENST00000559754 C6orf10Q5SRN2 563 aa4.18□□□□□ -1.74
SPG11-218ENST00000559754 CCDC174Q6PII3 467 aa4.18□□□□□ -1.74
SPG11-218ENST00000559754 SLC39A5Q6ZMH5 540 aa4.18□□□□□ -1.74
SPG11-218ENST00000559754 LDHAL6AQ6ZMR3 332 aa4.18□□□□□ -1.74
SPG11-218ENST00000559754 SLC22A17Q8WUG5 538 aa4.18□□□□□ -1.74
SPG11-218ENST00000559754 WDR60Q8WVS4 1066 aa4.18□□□□□ -1.74
SPG11-218ENST00000559754 CCT6BQ92526 530 aa4.18□□□□□ -1.74
SPG11-218ENST00000559754 NPIPB3Q92617 1050 aa4.18□□□□□ -1.74
SPG11-218ENST00000559754 MSI2Q96DH6 328 aaKnown RBP4.18□□□□□ -1.74
SPG11-218ENST00000559754 CRB3Q9BUF7 120 aa4.18□□□□□ -1.74
SPG11-218ENST00000559754 WDR12Q9GZL7 423 aaKnown RBP4.18□□□□□ -1.74
SPG11-218ENST00000559754 UTS2RQ9UKP6 389 aa4.18□□□□□ -1.74
SPG11-218ENST00000559754 LAMP3Q9UQV4 416 aa4.18□□□□□ -1.74
SPG11-218ENST00000559754 LRCH1Q9Y2L9 728 aa4.18□□□□□ -1.74
SPG11-218ENST00000559754 KAT6BQ8WYB5 2073 aa4.17□□□□□ -1.74
SPG11-218ENST00000559754 C3orf70A6NLC5 250 aaPredicted RBP4.17□□□□□ -1.74
SPG11-218ENST00000559754 LACTBL1A8MY62 500 aa4.17□□□□□ -1.74
SPG11-218ENST00000559754 RHODO00212 210 aa4.17□□□□□ -1.74
SPG11-218ENST00000559754 NCK2O43639 380 aa4.17□□□□□ -1.74
SPG11-218ENST00000559754 TAF5LO75529 589 aa4.17□□□□□ -1.74
SPG11-218ENST00000559754 CNTN5O94779 1100 aa4.17□□□□□ -1.74
SPG11-218ENST00000559754 P2RX3P56373 397 aa4.17□□□□□ -1.74
SPG11-218ENST00000559754 GEMIN4P57678 1058 aaKnown RBP4.17□□□□□ -1.74
SPG11-218ENST00000559754 GAD2Q05329 585 aa4.17□□□□□ -1.74
SPG11-218ENST00000559754 TBX2Q13207 712 aaPredicted RBP4.17□□□□□ -1.74
SPG11-218ENST00000559754 TRIM14Q14142 442 aa4.17□□□□□ -1.74
SPG11-218ENST00000559754 GPR162Q16538 588 aa4.17□□□□□ -1.74
SPG11-218ENST00000559754 TTC39AQ5SRH9 613 aa4.17□□□□□ -1.74
SPG11-218ENST00000559754 HYIQ5T013 277 aa4.17□□□□□ -1.74
SPG11-218ENST00000559754 JAKMIP3Q5VZ66 844 aa4.17□□□□□ -1.74
SPG11-218ENST00000559754 ZNF280DQ6N043 979 aa4.17□□□□□ -1.74
SPG11-218ENST00000559754 TMEM88Q6PEY1 159 aa4.17□□□□□ -1.74
SPG11-218ENST00000559754 CYB5R4Q7L1T6 521 aa4.17□□□□□ -1.74
SPG11-218ENST00000559754 PAQR4Q8N4S7 273 aaPredicted RBP4.17□□□□□ -1.74
SPG11-218ENST00000559754 OR2C3Q8N628 320 aa4.17□□□□□ -1.74
SPG11-218ENST00000559754 IL17REQ8NFR9 667 aa4.17□□□□□ -1.74
SPG11-218ENST00000559754 TRIM63Q969Q1 353 aa4.17□□□□□ -1.74
SPG11-218ENST00000559754 SKA1Q96BD8 255 aa4.17□□□□□ -1.74
SPG11-218ENST00000559754 RIPOR3Q96MK2 946 aa4.17□□□□□ -1.74
SPG11-218ENST00000559754 TMEM204Q9BSN7 226 aa4.17□□□□□ -1.74
SPG11-218ENST00000559754 SFXN1Q9H9B4 322 aa4.17□□□□□ -1.74
SPG11-218ENST00000559754 NKX2-8O15522 239 aa4.16□□□□□ -1.74
SPG11-218ENST00000559754 TIMM44O43615 452 aa4.16□□□□□ -1.74
SPG11-218ENST00000559754 ZNF500O60304 480 aaPredicted RBP4.16□□□□□ -1.74
SPG11-218ENST00000559754 NFATC1O95644 943 aa4.16□□□□□ -1.74
SPG11-218ENST00000559754 ANXA6P08133 673 aa4.16□□□□□ -1.74
SPG11-218ENST00000559754 TGFB3P10600 412 aa4.16□□□□□ -1.74
SPG11-218ENST00000559754 CHRNB1P11230 501 aa4.16□□□□□ -1.74
SPG11-218ENST00000559754 SLC37A1P57057 533 aa4.16□□□□□ -1.74
SPG11-218ENST00000559754 TNFAIP2Q03169 654 aa4.16□□□□□ -1.74
SPG11-218ENST00000559754 TLE3Q04726 772 aa4.16□□□□□ -1.74
SPG11-218ENST00000559754 DDX10Q13206 875 aaKnown RBP4.16□□□□□ -1.74
SPG11-218ENST00000559754 KCTD2Q14681 263 aa4.16□□□□□ -1.74
SPG11-218ENST00000559754 RAB30Q15771 203 aa4.16□□□□□ -1.74
SPG11-218ENST00000559754 AAK1Q2M2I8 961 aa4.16□□□□□ -1.74
SPG11-218ENST00000559754 TUBB8Q3ZCM7 444 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms