RNA–Protein interactions for RNA: ENST00000559281.5

TPM1-218, Transcript of tropomyosin 1, humanhuman

TSL 5 BASIC

Gene TPM1, Length 851 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-218ENST00000559281 SEMA4FO95754 770 aa18.33■□□□□ 0.52
TPM1-218ENST00000559281 F9P00740 461 aa18.33■□□□□ 0.52
TPM1-218ENST00000559281 PNMA6AP0CW24 399 aaPredicted RBP18.33■□□□□ 0.52
TPM1-218ENST00000559281 ACSL1P33121 698 aa18.33■□□□□ 0.52
TPM1-218ENST00000559281 MATKP42679 507 aa18.33■□□□□ 0.52
TPM1-218ENST00000559281 PTPN20Q4JDL3 420 aa18.33■□□□□ 0.52
TPM1-218ENST00000559281 DPY19L2P1Q6NXN4 242 aa18.33■□□□□ 0.52
TPM1-218ENST00000559281 IL27RAQ6UWB1 636 aa18.33■□□□□ 0.52
TPM1-218ENST00000559281 USP30Q70CQ3 517 aa18.33■□□□□ 0.52
TPM1-218ENST00000559281 SND1Q7KZF4 910 aaKnown RBP eCLIP18.33■□□□□ 0.52
TPM1-218ENST00000559281 PIP4P1Q86T03 277 aa18.33■□□□□ 0.52
TPM1-218ENST00000559281 ERICH1Q86X53 443 aa18.33■□□□□ 0.52
TPM1-218ENST00000559281 CCAR2Q8N163 923 aaKnown RBP18.33■□□□□ 0.52
TPM1-218ENST00000559281 ZCCHC9Q8N567 271 aaKnown RBP18.33■□□□□ 0.52
TPM1-218ENST00000559281 SNX19Q92543 992 aa18.33■□□□□ 0.52
TPM1-218ENST00000559281 C18orf8Q96DM3 657 aa18.33■□□□□ 0.52
TPM1-218ENST00000559281 MYO19Q96H55 970 aa18.33■□□□□ 0.52
TPM1-218ENST00000559281 MRGPRX3Q96LB0 322 aa18.33■□□□□ 0.52
TPM1-218ENST00000559281 RPRD1AQ96P16 312 aaPredicted RBP18.33■□□□□ 0.52
TPM1-218ENST00000559281 PRMT1Q99873 361 aaKnown RBP18.33■□□□□ 0.52
TPM1-218ENST00000559281 PLCB1Q9NQ66 1216 aa18.33■□□□□ 0.52
TPM1-218ENST00000559281 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.33■□□□□ 0.52
TPM1-218ENST00000559281 EIF2B4Q9UI10 523 aaKnown RBP18.33■□□□□ 0.52
TPM1-218ENST00000559281 FHOD1Q9Y613 1164 aa18.33■□□□□ 0.52
TPM1-218ENST00000559281 ACACBO00763 2458 aa18.32■□□□□ 0.52
TPM1-218ENST00000559281 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.32■□□□□ 0.52
TPM1-218ENST00000559281 EDDM13A0A1B0GTR0 161 aa18.32■□□□□ 0.52
TPM1-218ENST00000559281 SIN3BO75182 1162 aa18.32■□□□□ 0.52
TPM1-218ENST00000559281 CDH5P33151 784 aaPredicted RBP18.32■□□□□ 0.52
TPM1-218ENST00000559281 SCNN1AP37088 669 aa18.32■□□□□ 0.52
TPM1-218ENST00000559281 RNASE9P60153 205 aaKnown RBP18.32■□□□□ 0.52
TPM1-218ENST00000559281 ZNF177Q13360 481 aaPredicted RBP18.32■□□□□ 0.52
TPM1-218ENST00000559281 AUHQ13825 339 aaKnown RBP18.32■□□□□ 0.52
TPM1-218ENST00000559281 FKBP15Q5T1M5 1219 aa18.32■□□□□ 0.52
TPM1-218ENST00000559281 FBXL22Q6P050 247 aa18.32■□□□□ 0.52
TPM1-218ENST00000559281 DHX40Q8IX18 779 aaKnown RBP18.32■□□□□ 0.52
TPM1-218ENST00000559281 APCDD1Q8J025 514 aa18.32■□□□□ 0.52
TPM1-218ENST00000559281 NAA15Q9BXJ9 866 aaKnown RBP18.32■□□□□ 0.52
TPM1-218ENST00000559281 WDCPQ9H6R7 721 aa18.32■□□□□ 0.52
TPM1-218ENST00000559281 LSM8O95777 96 aaKnown RBP18.31■□□□□ 0.52
TPM1-218ENST00000559281 PDGFRAP16234 1089 aa18.31■□□□□ 0.52
TPM1-218ENST00000559281 GABRB2P47870 512 aa18.31■□□□□ 0.52
TPM1-218ENST00000559281 AFF3P51826 1226 aaKnown RBP18.31■□□□□ 0.52
TPM1-218ENST00000559281 PLK1P53350 603 aa18.31■□□□□ 0.52
TPM1-218ENST00000559281 GRIK2Q13002 908 aa18.31■□□□□ 0.52
TPM1-218ENST00000559281 TEAD4Q15561 434 aa18.31■□□□□ 0.52
TPM1-218ENST00000559281 BRMS1LQ5PSV4 323 aa18.31■□□□□ 0.52
TPM1-218ENST00000559281 C9orf64Q5T6V5 341 aa18.31■□□□□ 0.52
TPM1-218ENST00000559281 ACBD5Q5T8D3 534 aaPredicted RBP18.31■□□□□ 0.52
TPM1-218ENST00000559281 SASS6Q6UVJ0 657 aa18.31■□□□□ 0.52
TPM1-218ENST00000559281 ANKRD20A12PQ8NF67 263 aa18.31■□□□□ 0.52
TPM1-218ENST00000559281 PABPC3Q9H361 631 aaKnown RBP18.31■□□□□ 0.52
TPM1-218ENST00000559281 MTG2Q9H4K7 406 aa18.31■□□□□ 0.52
TPM1-218ENST00000559281 C6orf106Q9H6K1 298 aaPredicted RBP18.31■□□□□ 0.52
TPM1-218ENST00000559281 FBXL12Q9NXK8 326 aa18.31■□□□□ 0.52
TPM1-218ENST00000559281 TAB2Q9NYJ8 693 aa18.31■□□□□ 0.52
TPM1-218ENST00000559281 SLCO3A1Q9UIG8 710 aa18.31■□□□□ 0.52
TPM1-218ENST00000559281 ZBTB32Q9Y2Y4 487 aaPredicted RBP18.31■□□□□ 0.52
TPM1-218ENST00000559281 ITIH6Q6UXX5 1313 aa18.3■□□□□ 0.52
TPM1-218ENST00000559281 TTC34A8MYJ7 566 aa18.3■□□□□ 0.52
TPM1-218ENST00000559281 CLDN11O75508 207 aa18.3■□□□□ 0.52
TPM1-218ENST00000559281 CER1O95813 267 aa18.3■□□□□ 0.52
TPM1-218ENST00000559281 CD59P13987 128 aa18.3■□□□□ 0.52
TPM1-218ENST00000559281 CTSOP43234 321 aaPredicted RBP18.3■□□□□ 0.52
TPM1-218ENST00000559281 FOXC1Q12948 553 aa18.3■□□□□ 0.52
TPM1-218ENST00000559281 CST6Q15828 149 aa18.3■□□□□ 0.52
TPM1-218ENST00000559281 TAF3Q5VWG9 929 aa18.3■□□□□ 0.52
TPM1-218ENST00000559281 ZNF677Q86XU0 584 aa18.3■□□□□ 0.52
TPM1-218ENST00000559281 MMAAQ8IVH4 418 aaKnown RBP18.3■□□□□ 0.52
TPM1-218ENST00000559281 OR2I1PQ8NGU4 316 aa18.3■□□□□ 0.52
TPM1-218ENST00000559281 RPL10LQ96L21 214 aaKnown RBP18.3■□□□□ 0.52
TPM1-218ENST00000559281 NPY6RQ99463 290 aa18.3■□□□□ 0.52
TPM1-218ENST00000559281 OMDQ99983 421 aa18.3■□□□□ 0.52
TPM1-218ENST00000559281 VPS16Q9H269 839 aa18.3■□□□□ 0.52
TPM1-218ENST00000559281 OSGEPQ9NPF4 335 aa18.3■□□□□ 0.52
TPM1-218ENST00000559281 VANGL2Q9ULK5 521 aa18.3■□□□□ 0.52
TPM1-218ENST00000559281 DAAM1Q9Y4D1 1078 aa18.3■□□□□ 0.52
TPM1-218ENST00000559281 PCDHB9Q9Y5E1 797 aa18.3■□□□□ 0.52
TPM1-218ENST00000559281 HS3ST4Q9Y661 456 aa18.3■□□□□ 0.52
TPM1-218ENST00000559281 F8VZ95 297 aa18.29■□□□□ 0.52
TPM1-218ENST00000559281 PAGE1O75459 146 aa18.29■□□□□ 0.52
TPM1-218ENST00000559281 FSBPO95073 299 aa18.29■□□□□ 0.52
TPM1-218ENST00000559281 CD27P26842 260 aa18.29■□□□□ 0.52
TPM1-218ENST00000559281 SLC8A1P32418 973 aa18.29■□□□□ 0.52
TPM1-218ENST00000559281 CXCR3P49682 368 aa18.29■□□□□ 0.52
TPM1-218ENST00000559281 SIM1P81133 766 aaPredicted RBP18.29■□□□□ 0.52
TPM1-218ENST00000559281 DEUP1Q05D60 604 aa18.29■□□□□ 0.52
TPM1-218ENST00000559281 SLC25A52Q3SY17 297 aa18.29■□□□□ 0.52
TPM1-218ENST00000559281 FAM102AQ5T9C2 384 aaPredicted RBP18.29■□□□□ 0.52
TPM1-218ENST00000559281 LRRC31Q6UY01 552 aa18.29■□□□□ 0.52
TPM1-218ENST00000559281 CIR1Q86X95 450 aaPredicted RBP18.29■□□□□ 0.52
TPM1-218ENST00000559281 C1orf216Q8TAB5 229 aa18.29■□□□□ 0.52
TPM1-218ENST00000559281 IGSF8Q969P0 613 aa18.29■□□□□ 0.52
TPM1-218ENST00000559281 BIRC7Q96CA5 298 aa18.29■□□□□ 0.52
TPM1-218ENST00000559281 PGAP3Q96FM1 320 aaPredicted RBP18.29■□□□□ 0.52
TPM1-218ENST00000559281 TKTL2Q9H0I9 626 aa18.29■□□□□ 0.52
TPM1-218ENST00000559281 SIK2Q9H0K1 926 aa18.29■□□□□ 0.52
TPM1-218ENST00000559281 GAREM1Q9H706 876 aa18.29■□□□□ 0.52
TPM1-218ENST00000559281 ANO10Q9NW15 660 aa18.29■□□□□ 0.52
TPM1-218ENST00000559281 LAMA1P25391 3075 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms