RNA–Protein interactions for RNA: ENST00000559222.5

CASC4-209, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-209ENST00000559222 TFAP2DQ7Z6R9 452 aa19.28■□□□□ 0.68
CASC4-209ENST00000559222 AHI1Q8N157 1196 aa19.28■□□□□ 0.68
CASC4-209ENST00000559222 MDGA1Q8NFP4 955 aa19.28■□□□□ 0.68
CASC4-209ENST00000559222 TSTD1Q8NFU3 115 aa19.28■□□□□ 0.68
CASC4-209ENST00000559222 WFIKKN2Q8TEU8 576 aa19.28■□□□□ 0.68
CASC4-209ENST00000559222 HAPLN3Q96S86 360 aa19.28■□□□□ 0.68
CASC4-209ENST00000559222 GABRG3Q99928 467 aa19.28■□□□□ 0.68
CASC4-209ENST00000559222 MTG2Q9H4K7 406 aa19.28■□□□□ 0.68
CASC4-209ENST00000559222 NHEJ1Q9H9Q4 299 aaPredicted RBP19.28■□□□□ 0.68
CASC4-209ENST00000559222 ZNF212Q9UDV6 495 aa19.28■□□□□ 0.68
CASC4-209ENST00000559222 VPS13AQ96RL7 3174 aa19.28■□□□□ 0.68
CASC4-209ENST00000559222 DMDP11532 3685 aa19.27■□□□□ 0.68
CASC4-209ENST00000559222 SSU72P8A0A1W2PR75 194 aa19.27■□□□□ 0.68
CASC4-209ENST00000559222 TCRBV21S2A2A0A5A6 115 aa19.27■□□□□ 0.68
CASC4-209ENST00000559222 ANKRD62A6NC57 917 aa19.27■□□□□ 0.68
CASC4-209ENST00000559222 DRGXA6NNA5 263 aa19.27■□□□□ 0.68
CASC4-209ENST00000559222 HRO43593 1189 aa19.27■□□□□ 0.68
CASC4-209ENST00000559222 APBB3O95704 486 aa19.27■□□□□ 0.68
CASC4-209ENST00000559222 CYP1A2P05177 515 aa19.27■□□□□ 0.68
CASC4-209ENST00000559222 MYBL1P10243 752 aa19.27■□□□□ 0.68
CASC4-209ENST00000559222 ENPP2Q13822 863 aa19.27■□□□□ 0.68
CASC4-209ENST00000559222 EIF4HQ15056 248 aaKnown RBP19.27■□□□□ 0.68
CASC4-209ENST00000559222 CA9Q16790 459 aa19.27■□□□□ 0.68
CASC4-209ENST00000559222 HSF5Q4G112 596 aaPredicted RBP19.27■□□□□ 0.68
CASC4-209ENST00000559222 NUDT18Q6ZVK8 323 aa19.27■□□□□ 0.68
CASC4-209ENST00000559222 WDR5BQ86VZ2 330 aa19.27■□□□□ 0.68
CASC4-209ENST00000559222 CNGA4Q8IV77 575 aa19.27■□□□□ 0.68
CASC4-209ENST00000559222 NTAN1Q96AB6 310 aa19.27■□□□□ 0.68
CASC4-209ENST00000559222 ALG14Q96F25 216 aa19.27■□□□□ 0.68
CASC4-209ENST00000559222 TRIM11Q96F44 468 aa19.27■□□□□ 0.68
CASC4-209ENST00000559222 MYO19Q96H55 970 aa19.27■□□□□ 0.68
CASC4-209ENST00000559222 C1orf74Q96LT6 269 aa19.27■□□□□ 0.68
CASC4-209ENST00000559222 NUP85Q9BW27 656 aa19.27■□□□□ 0.68
CASC4-209ENST00000559222 CD93Q9NPY3 652 aa19.27■□□□□ 0.68
CASC4-209ENST00000559222 FZD10Q9ULW2 581 aa19.27■□□□□ 0.68
CASC4-209ENST00000559222 INVSQ9Y283 1065 aa19.27■□□□□ 0.68
CASC4-209ENST00000559222 PAXBP1Q9Y5B6 917 aa19.27■□□□□ 0.68
CASC4-209ENST00000559222 SCINQ9Y6U3 715 aa19.27■□□□□ 0.68
CASC4-209ENST00000559222 CHD5Q8TDI0 1954 aa19.26■□□□□ 0.67
CASC4-209ENST00000559222 PLXND1Q9Y4D7 1925 aa19.26■□□□□ 0.67
CASC4-209ENST00000559222 HOXA6P31267 233 aa19.26■□□□□ 0.67
CASC4-209ENST00000559222 STK19P49842 368 aaPredicted RBP19.26■□□□□ 0.67
CASC4-209ENST00000559222 PLEKHG6Q3KR16 790 aa19.26■□□□□ 0.67
CASC4-209ENST00000559222 TTC39BQ5VTQ0 682 aaPredicted RBP19.26■□□□□ 0.67
CASC4-209ENST00000559222 ALYREFQ86V81 257 aaKnown RBP19.26■□□□□ 0.67
CASC4-209ENST00000559222 LONP2Q86WA8 852 aa19.26■□□□□ 0.67
CASC4-209ENST00000559222 RASSF3Q86WH2 238 aa19.26■□□□□ 0.67
CASC4-209ENST00000559222 CCDC26Q8TAB7 109 aa19.26■□□□□ 0.67
CASC4-209ENST00000559222 KCNV2Q8TDN2 545 aa19.26■□□□□ 0.67
CASC4-209ENST00000559222 HMGB4Q8WW32 186 aa19.26■□□□□ 0.67
CASC4-209ENST00000559222 MRGPRX3Q96LB0 322 aa19.26■□□□□ 0.67
CASC4-209ENST00000559222 DEF6Q9H4E7 631 aa19.26■□□□□ 0.67
CASC4-209ENST00000559222 NDFIP2Q9NV92 336 aa19.26■□□□□ 0.67
CASC4-209ENST00000559222 ZNHIT6Q9NWK9 470 aaKnown RBP19.26■□□□□ 0.67
CASC4-209ENST00000559222 KIAA1522Q9P206 1035 aaPredicted RBP19.26■□□□□ 0.67
CASC4-209ENST00000559222 PCSK1NQ9UHG2 260 aa19.26■□□□□ 0.67
CASC4-209ENST00000559222 PCDHGA2Q9Y5H1 932 aa19.26■□□□□ 0.67
CASC4-209ENST00000559222 OR51B4Q9Y5P0 310 aa19.26■□□□□ 0.67
CASC4-209ENST00000559222 DCLK1O15075 740 aa19.25■□□□□ 0.67
CASC4-209ENST00000559222 LRCH4O75427 683 aa19.25■□□□□ 0.67
CASC4-209ENST00000559222 LRIG2O94898 1065 aa19.25■□□□□ 0.67
CASC4-209ENST00000559222 GABRG2P18507 467 aa19.25■□□□□ 0.67
CASC4-209ENST00000559222 DGKEP52429 567 aa19.25■□□□□ 0.67
CASC4-209ENST00000559222 CDH4P55283 916 aa19.25■□□□□ 0.67
CASC4-209ENST00000559222 SCAPQ12770 1279 aa19.25■□□□□ 0.67
CASC4-209ENST00000559222 FNDC3BQ53EP0 1204 aaKnown RBP19.25■□□□□ 0.67
CASC4-209ENST00000559222 ASCL5Q7RTU5 278 aa19.25■□□□□ 0.67
CASC4-209ENST00000559222 TRMT11Q7Z4G4 463 aaKnown RBP19.25■□□□□ 0.67
CASC4-209ENST00000559222 SLFN11Q7Z7L1 901 aa19.25■□□□□ 0.67
CASC4-209ENST00000559222 CAMKK1Q8N5S9 505 aa19.25■□□□□ 0.67
CASC4-209ENST00000559222 FRMD1Q8N878 549 aa19.25■□□□□ 0.67
CASC4-209ENST00000559222 UCMAQ8WVF2 138 aa19.25■□□□□ 0.67
CASC4-209ENST00000559222 TTC17Q96AE7 1141 aa19.25■□□□□ 0.67
CASC4-209ENST00000559222 PSMB7Q99436 277 aa19.25■□□□□ 0.67
CASC4-209ENST00000559222 IRF2BPLQ9H1B7 796 aa19.25■□□□□ 0.67
CASC4-209ENST00000559222 OSBPL2Q9H1P3 480 aa19.25■□□□□ 0.67
CASC4-209ENST00000559222 TMEM245Q9H330 911 aa19.25■□□□□ 0.67
CASC4-209ENST00000559222 OR12D3Q9UGF7 316 aa19.25■□□□□ 0.67
CASC4-209ENST00000559222 USP34Q70CQ2 3546 aa19.25■□□□□ 0.67
CASC4-209ENST00000559222 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP19.24■□□□□ 0.67
CASC4-209ENST00000559222 AXIN1O15169 862 aa19.24■□□□□ 0.67
CASC4-209ENST00000559222 AKR1B10O60218 316 aa19.24■□□□□ 0.67
CASC4-209ENST00000559222 CLDN11O75508 207 aa19.24■□□□□ 0.67
CASC4-209ENST00000559222 DLDP09622 509 aaKnown RBP19.24■□□□□ 0.67
CASC4-209ENST00000559222 POLR2EP19388 210 aaKnown RBP19.24■□□□□ 0.67
CASC4-209ENST00000559222 NDUFV2P19404 249 aa19.24■□□□□ 0.67
CASC4-209ENST00000559222 IL1R2P27930 398 aa19.24■□□□□ 0.67
CASC4-209ENST00000559222 MIPP30301 263 aa19.24■□□□□ 0.67
CASC4-209ENST00000559222 MTA1Q13330 715 aa19.24■□□□□ 0.67
CASC4-209ENST00000559222 ZNF177Q13360 481 aaPredicted RBP19.24■□□□□ 0.67
CASC4-209ENST00000559222 LPAL2Q16609 132 aa19.24■□□□□ 0.67
CASC4-209ENST00000559222 TSR1Q2NL82 804 aaKnown RBP19.24■□□□□ 0.67
CASC4-209ENST00000559222 ARL13BQ3SXY8 428 aa19.24■□□□□ 0.67
CASC4-209ENST00000559222 RNF219Q5W0B1 726 aaPredicted RBP19.24■□□□□ 0.67
CASC4-209ENST00000559222 TXNRD3NBQ6F5E7 133 aa19.24■□□□□ 0.67
CASC4-209ENST00000559222 LRRC31Q6UY01 552 aa19.24■□□□□ 0.67
CASC4-209ENST00000559222 FNIP1Q8TF40 1166 aa19.24■□□□□ 0.67
CASC4-209ENST00000559222 ATRIPQ8WXE1 791 aa19.24■□□□□ 0.67
CASC4-209ENST00000559222 RPL10LQ96L21 214 aaKnown RBP19.24■□□□□ 0.67
CASC4-209ENST00000559222 SNRNP25Q9BV90 132 aaKnown RBP19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms