RNA–Protein interactions for RNA: ENST00000559192.5

USP3-210, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best)

Gene USP3, Length 5,499 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-210ENST00000559192 C17orf80Q9BSJ5 609 aa7.27□□□□□ -1.25
USP3-210ENST00000559192 POMKQ9H5K3 350 aa7.27□□□□□ -1.25
USP3-210ENST00000559192 WDR55Q9H6Y2 383 aaPredicted RBP7.27□□□□□ -1.25
USP3-210ENST00000559192 RNF19AQ9NV58 838 aa7.27□□□□□ -1.25
USP3-210ENST00000559192 GGA3Q9NZ52 723 aa7.27□□□□□ -1.25
USP3-210ENST00000559192 SLC17A6Q9P2U8 582 aa7.27□□□□□ -1.25
USP3-210ENST00000559192 LINC00854A0A1B0GVQ3 168 aa7.26□□□□□ -1.25
USP3-210ENST00000559192 SPDYE2BA6NHP3 402 aa7.26□□□□□ -1.25
USP3-210ENST00000559192 NCF1BA6NI72 391 aaPredicted RBP7.26□□□□□ -1.25
USP3-210ENST00000559192 NCF1CA8MVU1 366 aaPredicted RBP7.26□□□□□ -1.25
USP3-210ENST00000559192 KCNK1O00180 336 aa7.26□□□□□ -1.25
USP3-210ENST00000559192 BIRC5O15392 142 aa7.26□□□□□ -1.25
USP3-210ENST00000559192 CYP1A1P04798 512 aaPredicted RBP7.26□□□□□ -1.25
USP3-210ENST00000559192 SPDYE6P0CI01 402 aa7.26□□□□□ -1.25
USP3-210ENST00000559192 TXNP10599 105 aaKnown RBP7.26□□□□□ -1.25
USP3-210ENST00000559192 NCF1P14598 390 aaPredicted RBP7.26□□□□□ -1.25
USP3-210ENST00000559192 CCT3P49368 545 aaKnown RBP7.26□□□□□ -1.25
USP3-210ENST00000559192 RPL14P50914 215 aaKnown RBP7.26□□□□□ -1.25
USP3-210ENST00000559192 KCNK10P57789 538 aa7.26□□□□□ -1.25
USP3-210ENST00000559192 UGP2Q16851 508 aa7.26□□□□□ -1.25
USP3-210ENST00000559192 ZACNQ401N2 412 aa7.26□□□□□ -1.25
USP3-210ENST00000559192 CGB2Q6NT52 195 aa7.26□□□□□ -1.25
USP3-210ENST00000559192 ASRGL1Q7L266 308 aa7.26□□□□□ -1.25
USP3-210ENST00000559192 TMC7Q7Z402 723 aa7.26□□□□□ -1.25
USP3-210ENST00000559192 DPP9Q86TI2 863 aa7.26□□□□□ -1.25
USP3-210ENST00000559192 C12orf56Q8IXR9 622 aa7.26□□□□□ -1.25
USP3-210ENST00000559192 SAMD3Q8N6K7 520 aa7.26□□□□□ -1.25
USP3-210ENST00000559192 ENDOVQ8N8Q3 282 aaKnown RBP7.26□□□□□ -1.25
USP3-210ENST00000559192 TRAPPC12Q8WVT3 735 aa7.26□□□□□ -1.25
USP3-210ENST00000559192 C7orf26Q96N11 449 aa7.26□□□□□ -1.25
USP3-210ENST00000559192 SEPHS2Q99611 448 aa7.26□□□□□ -1.25
USP3-210ENST00000559192 NSMCE4AQ9NXX6 385 aa7.26□□□□□ -1.25
USP3-210ENST00000559192 SLC7A8Q9UHI5 535 aa7.26□□□□□ -1.25
USP3-210ENST00000559192 TMEM63AO94886 807 aa7.26□□□□□ -1.25
USP3-210ENST00000559192 VAPBO95292 243 aa7.26□□□□□ -1.25
USP3-210ENST00000559192 F7P08709 466 aaPredicted RBP7.26□□□□□ -1.25
USP3-210ENST00000559192 RARBP10826 455 aa7.26□□□□□ -1.25
USP3-210ENST00000559192 NCAM1P13591 858 aa7.26□□□□□ -1.25
USP3-210ENST00000559192 NFKBIAP25963 317 aa7.26□□□□□ -1.25
USP3-210ENST00000559192 PIK3R1P27986 724 aa7.26□□□□□ -1.25
USP3-210ENST00000559192 BRSK2Q8IWQ3 736 aa7.26□□□□□ -1.25
USP3-210ENST00000559192 MYO1HQ8N1T3 1032 aa7.26□□□□□ -1.25
USP3-210ENST00000559192 STX19Q8N4C7 294 aa7.26□□□□□ -1.25
USP3-210ENST00000559192 OR52K1Q8NGK4 314 aa7.26□□□□□ -1.25
USP3-210ENST00000559192 SLCO2A1Q92959 643 aa7.26□□□□□ -1.25
USP3-210ENST00000559192 LRRC39Q96DD0 335 aa7.26□□□□□ -1.25
USP3-210ENST00000559192 APBA2Q99767 749 aa7.26□□□□□ -1.25
USP3-210ENST00000559192 SP110Q9HB58 689 aa7.26□□□□□ -1.25
USP3-210ENST00000559192 EXOSC4Q9NPD3 245 aaKnown RBP7.26□□□□□ -1.25
USP3-210ENST00000559192 KLK14Q9P0G3 267 aa7.26□□□□□ -1.25
USP3-210ENST00000559192 DSEQ9UL01 958 aa7.26□□□□□ -1.25
USP3-210ENST00000559192 SORCS3Q9UPU3 1222 aa7.26□□□□□ -1.25
USP3-210ENST00000559192 MYO1GB0I1T2 1018 aa7.26□□□□□ -1.25
USP3-210ENST00000559192 SEMA3DO95025 777 aa7.26□□□□□ -1.25
USP3-210ENST00000559192 VTNP04004 478 aa7.26□□□□□ -1.25
USP3-210ENST00000559192 ITGA2BP08514 1039 aa7.26□□□□□ -1.25
USP3-210ENST00000559192 PLK1P53350 603 aa7.26□□□□□ -1.25
USP3-210ENST00000559192 NR1H2P55055 460 aa7.26□□□□□ -1.25
USP3-210ENST00000559192 TSTA3Q13630 321 aaPredicted RBP7.26□□□□□ -1.25
USP3-210ENST00000559192 ANGPTL8Q6UXH0 198 aa7.26□□□□□ -1.25
USP3-210ENST00000559192 SLC41A1Q8IVJ1 513 aa7.26□□□□□ -1.25
USP3-210ENST00000559192 DAW1Q8N136 415 aa7.26□□□□□ -1.25
USP3-210ENST00000559192 PQLC1Q8N2U9 271 aa7.26□□□□□ -1.25
USP3-210ENST00000559192 CAPSLQ8WWF8 208 aa7.26□□□□□ -1.25
USP3-210ENST00000559192 RNF157Q96PX1 679 aa7.26□□□□□ -1.25
USP3-210ENST00000559192 CDH19Q9H159 772 aa7.26□□□□□ -1.25
USP3-210ENST00000559192 APOBEC3GQ9HC16 384 aaKnown RBP7.26□□□□□ -1.25
USP3-210ENST00000559192 SSU72Q9NP77 194 aaKnown RBP7.26□□□□□ -1.25
USP3-210ENST00000559192 ATAD3AQ9NVI7 634 aa7.26□□□□□ -1.25
USP3-210ENST00000559192 UBIAD1Q9Y5Z9 338 aa7.26□□□□□ -1.25
USP3-210ENST00000559192 LACTBL1A8MY62 500 aa7.26□□□□□ -1.25
USP3-210ENST00000559192 GRIA4P48058 902 aa7.26□□□□□ -1.25
USP3-210ENST00000559192 PRKAA1Q13131 559 aa7.26□□□□□ -1.25
USP3-210ENST00000559192 POU6F1Q14863 301 aa7.26□□□□□ -1.25
USP3-210ENST00000559192 ANGPT1Q15389 498 aa7.26□□□□□ -1.25
USP3-210ENST00000559192 FAM83EQ2M2I3 478 aa7.26□□□□□ -1.25
USP3-210ENST00000559192 KIZQ2M2Z5 673 aa7.26□□□□□ -1.25
USP3-210ENST00000559192 SPANXN3Q5MJ09 141 aa7.26□□□□□ -1.25
USP3-210ENST00000559192 C15orf52Q6ZUT6 534 aaKnown RBP7.26□□□□□ -1.25
USP3-210ENST00000559192 NIPA1Q7RTP0 329 aa7.26□□□□□ -1.25
USP3-210ENST00000559192 PLEKHO2Q8TD55 490 aa7.26□□□□□ -1.25
USP3-210ENST00000559192 FAM162AQ96A26 154 aa7.26□□□□□ -1.25
USP3-210ENST00000559192 PHF21AQ96BD5 680 aa7.26□□□□□ -1.25
USP3-210ENST00000559192 BORCS6Q96GS4 357 aa7.26□□□□□ -1.25
USP3-210ENST00000559192 EBNA1BP2Q99848 306 aaKnown RBP7.26□□□□□ -1.25
USP3-210ENST00000559192 SNRNP25Q9BV90 132 aaKnown RBP7.26□□□□□ -1.25
USP3-210ENST00000559192 GPRC5DQ9NZD1 345 aa7.26□□□□□ -1.25
USP3-210ENST00000559192 SPATA2Q9UM82 520 aa7.26□□□□□ -1.25
USP3-210ENST00000559192 NOD1Q9Y239 953 aa7.26□□□□□ -1.25
USP3-210ENST00000559192 MRASO14807 208 aa7.25□□□□□ -1.25
USP3-210ENST00000559192 C4BPAP04003 597 aaKnown RBP7.25□□□□□ -1.25
USP3-210ENST00000559192 TSHRP16473 764 aa7.25□□□□□ -1.25
USP3-210ENST00000559192 MMP8P22894 467 aa7.25□□□□□ -1.25
USP3-210ENST00000559192 MPSTP25325 297 aa7.25□□□□□ -1.25
USP3-210ENST00000559192 CRHR1P34998 444 aa7.25□□□□□ -1.25
USP3-210ENST00000559192 PPARGP37231 505 aaPredicted RBP7.25□□□□□ -1.25
USP3-210ENST00000559192 IL12RB1P42701 662 aa7.25□□□□□ -1.25
USP3-210ENST00000559192 PTP4A2Q12974 167 aa7.25□□□□□ -1.25
USP3-210ENST00000559192 MOGSQ13724 837 aa7.25□□□□□ -1.25
USP3-210ENST00000559192 TTLL4Q14679 1199 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms