RNA–Protein interactions for RNA: ENST00000559061.5

SNX1-204, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-204ENST00000559061 OR12D3Q9UGF7 316 aa11.79□□□□□ -0.52
SNX1-204ENST00000559061 PCSK1NQ9UHG2 260 aa11.79□□□□□ -0.52
SNX1-204ENST00000559061 GGA2Q9UJY4 613 aa11.79□□□□□ -0.52
SNX1-204ENST00000559061 INTUQ9ULD6 942 aa11.79□□□□□ -0.52
SNX1-204ENST00000559061 TBC1D30Q9Y2I9 924 aa11.79□□□□□ -0.52
SNX1-204ENST00000559061 PCDHA13Q9Y5I0 950 aa11.79□□□□□ -0.52
SNX1-204ENST00000559061 EPN1Q9Y6I3 576 aaPredicted RBP11.79□□□□□ -0.52
SNX1-204ENST00000559061 A0A1W2PQF6 199 aa11.78□□□□□ -0.52
SNX1-204ENST00000559061 TBC1D3BA6NDS4 549 aa11.78□□□□□ -0.52
SNX1-204ENST00000559061 GOLGA6L3A6NEY3 463 aa11.78□□□□□ -0.52
SNX1-204ENST00000559061 WASH3PC4AMC7 463 aa11.78□□□□□ -0.52
SNX1-204ENST00000559061 PROSCO94903 275 aa11.78□□□□□ -0.52
SNX1-204ENST00000559061 PAPSS2O95340 614 aaPredicted RBP11.78□□□□□ -0.52
SNX1-204ENST00000559061 PRKCHP24723 683 aa11.78□□□□□ -0.52
SNX1-204ENST00000559061 PCK1P35558 622 aa11.78□□□□□ -0.52
SNX1-204ENST00000559061 TIE1P35590 1138 aa11.78□□□□□ -0.52
SNX1-204ENST00000559061 IL12RB1P42701 662 aa11.78□□□□□ -0.52
SNX1-204ENST00000559061 MAGEA9P43362 315 aa11.78□□□□□ -0.52
SNX1-204ENST00000559061 CCZ1BP86790 482 aa11.78□□□□□ -0.52
SNX1-204ENST00000559061 CCZ1P86791 482 aaPredicted RBP11.78□□□□□ -0.52
SNX1-204ENST00000559061 TSR1Q2NL82 804 aaKnown RBP11.78□□□□□ -0.52
SNX1-204ENST00000559061 FBXO43Q4G163 708 aa11.78□□□□□ -0.52
SNX1-204ENST00000559061 PITRM1Q5JRX3 1037 aa11.78□□□□□ -0.52
SNX1-204ENST00000559061 TTC39BQ5VTQ0 682 aaPredicted RBP11.78□□□□□ -0.52
SNX1-204ENST00000559061 KIAA1211LQ6NV74 962 aa11.78□□□□□ -0.52
SNX1-204ENST00000559061 SCYL2Q6P3W7 929 aa11.78□□□□□ -0.52
SNX1-204ENST00000559061 TFAP2DQ7Z6R9 452 aa11.78□□□□□ -0.52
SNX1-204ENST00000559061 SLFN11Q7Z7L1 901 aa11.78□□□□□ -0.52
SNX1-204ENST00000559061 C1orf210Q8IVY1 113 aa11.78□□□□□ -0.52
SNX1-204ENST00000559061 CCDC33Q8N5R6 958 aa11.78□□□□□ -0.52
SNX1-204ENST00000559061 CYB5D2Q8WUJ1 264 aa11.78□□□□□ -0.52
SNX1-204ENST00000559061 CTNNBL1Q8WYA6 563 aaPredicted RBP11.78□□□□□ -0.52
SNX1-204ENST00000559061 RFFLQ8WZ73 363 aa11.78□□□□□ -0.52
SNX1-204ENST00000559061 TTC17Q96AE7 1141 aa11.78□□□□□ -0.52
SNX1-204ENST00000559061 DESI2Q9BSY9 194 aa11.78□□□□□ -0.52
SNX1-204ENST00000559061 KLC2Q9H0B6 622 aa11.78□□□□□ -0.52
SNX1-204ENST00000559061 GOLPH3Q9H4A6 298 aa11.78□□□□□ -0.52
SNX1-204ENST00000559061 SPATA6Q9NWH7 488 aaPredicted RBP11.78□□□□□ -0.52
SNX1-204ENST00000559061 CTTNBP2NLQ9P2B4 639 aa11.78□□□□□ -0.52
SNX1-204ENST00000559061 THAP10Q9P2Z0 257 aaPredicted RBP11.78□□□□□ -0.52
SNX1-204ENST00000559061 SLC12A6Q9UHW9 1150 aa11.78□□□□□ -0.52
SNX1-204ENST00000559061 USP18Q9UMW8 372 aa11.78□□□□□ -0.52
SNX1-204ENST00000559061 AP4E1Q9UPM8 1137 aa11.78□□□□□ -0.52
SNX1-204ENST00000559061 MFHAS1Q9Y4C4 1052 aa11.78□□□□□ -0.52
SNX1-204ENST00000559061 DUSP10Q9Y6W6 482 aa11.78□□□□□ -0.52
SNX1-204ENST00000559061 A0A0D9SEW6 157 aa11.77□□□□□ -0.53
SNX1-204ENST00000559061 NCAM2O15394 837 aa11.77□□□□□ -0.53
SNX1-204ENST00000559061 SRGAP2O75044 1071 aa11.77□□□□□ -0.53
SNX1-204ENST00000559061 KLF8O95600 359 aaPredicted RBP11.77□□□□□ -0.53
SNX1-204ENST00000559061 GLDCP23378 1020 aa11.77□□□□□ -0.53
SNX1-204ENST00000559061 L1CAMP32004 1257 aa11.77□□□□□ -0.53
SNX1-204ENST00000559061 WASP42768 502 aa11.77□□□□□ -0.53
SNX1-204ENST00000559061 MAGEA1P43355 309 aa11.77□□□□□ -0.53
SNX1-204ENST00000559061 PLK1P53350 603 aa11.77□□□□□ -0.53
SNX1-204ENST00000559061 HADHBP55084 474 aaKnown RBP11.77□□□□□ -0.53
SNX1-204ENST00000559061 CDH4P55283 916 aa11.77□□□□□ -0.53
SNX1-204ENST00000559061 MRPS21P82921 87 aaKnown RBP11.77□□□□□ -0.53
SNX1-204ENST00000559061 MTA1Q13330 715 aa11.77□□□□□ -0.53
SNX1-204ENST00000559061 ANGPT1Q15389 498 aa11.77□□□□□ -0.53
SNX1-204ENST00000559061 SMTNL2Q2TAL5 461 aa11.77□□□□□ -0.53
SNX1-204ENST00000559061 PLEKHG6Q3KR16 790 aa11.77□□□□□ -0.53
SNX1-204ENST00000559061 ATP13A4Q4VNC1 1196 aa11.77□□□□□ -0.53
SNX1-204ENST00000559061 KCNT1Q5JUK3 1230 aa11.77□□□□□ -0.53
SNX1-204ENST00000559061 RABGAP1LQ5R372 815 aa11.77□□□□□ -0.53
SNX1-204ENST00000559061 MBLAC2Q68D91 279 aa11.77□□□□□ -0.53
SNX1-204ENST00000559061 SYT13Q7L8C5 426 aa11.77□□□□□ -0.53
SNX1-204ENST00000559061 ZNF513Q8N8E2 541 aaPredicted RBP11.77□□□□□ -0.53
SNX1-204ENST00000559061 TXNDC5Q8NBS9 432 aaKnown RBP11.77□□□□□ -0.53
SNX1-204ENST00000559061 FAM71BQ8TC56 605 aa11.77□□□□□ -0.53
SNX1-204ENST00000559061 TSC1Q92574 1164 aa11.77□□□□□ -0.53
SNX1-204ENST00000559061 GABRG3Q99928 467 aa11.77□□□□□ -0.53
SNX1-204ENST00000559061 IER2Q9BTL4 223 aa11.77□□□□□ -0.53
SNX1-204ENST00000559061 TMEM245Q9H330 911 aa11.77□□□□□ -0.53
SNX1-204ENST00000559061 MTG2Q9H4K7 406 aa11.77□□□□□ -0.53
SNX1-204ENST00000559061 TMEM51Q9NW97 253 aa11.77□□□□□ -0.53
SNX1-204ENST00000559061 ELOVL2Q9NXB9 296 aa11.77□□□□□ -0.53
SNX1-204ENST00000559061 CACNA2D2Q9NY47 1150 aa11.77□□□□□ -0.53
SNX1-204ENST00000559061 TRIM10Q9UDY6 481 aa11.77□□□□□ -0.53
SNX1-204ENST00000559061 IP6K2Q9UHH9 426 aa11.77□□□□□ -0.53
SNX1-204ENST00000559061 MMP17Q9ULZ9 603 aa11.77□□□□□ -0.53
SNX1-204ENST00000559061 PAXBP1Q9Y5B6 917 aa11.77□□□□□ -0.53
SNX1-204ENST00000559061 RAD54BQ9Y620 910 aa11.77□□□□□ -0.53
SNX1-204ENST00000559061 PLXND1Q9Y4D7 1925 aa11.77□□□□□ -0.53
SNX1-204ENST00000559061 CACNA1HO95180 2353 aa11.76□□□□□ -0.53
SNX1-204ENST00000559061 NUP205Q92621 2012 aa11.76□□□□□ -0.53
SNX1-204ENST00000559061 CLDN11O75508 207 aa11.76□□□□□ -0.53
SNX1-204ENST00000559061 ZMPSTE24O75844 475 aa11.76□□□□□ -0.53
SNX1-204ENST00000559061 CD160O95971 181 aa11.76□□□□□ -0.53
SNX1-204ENST00000559061 CD48P09326 243 aa11.76□□□□□ -0.53
SNX1-204ENST00000559061 SP9P0CG40 484 aa11.76□□□□□ -0.53
SNX1-204ENST00000559061 RARAP10276 462 aa11.76□□□□□ -0.53
SNX1-204ENST00000559061 IL4RP24394 825 aa11.76□□□□□ -0.53
SNX1-204ENST00000559061 MAN1A1P33908 653 aa11.76□□□□□ -0.53
SNX1-204ENST00000559061 STK19P49842 368 aaPredicted RBP11.76□□□□□ -0.53
SNX1-204ENST00000559061 AIF1P55008 147 aa11.76□□□□□ -0.53
SNX1-204ENST00000559061 CDH18Q13634 790 aa11.76□□□□□ -0.53
SNX1-204ENST00000559061 DPYSQ14117 519 aa11.76□□□□□ -0.53
SNX1-204ENST00000559061 PIGHQ14442 188 aaPredicted RBP11.76□□□□□ -0.53
SNX1-204ENST00000559061 DMC1Q14565 340 aa11.76□□□□□ -0.53
SNX1-204ENST00000559061 ZNF234Q14588 700 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms