RNA–Protein interactions for RNA: ENST00000558575.1

LINC01220-201, Transcript of long intergenic non-protein coding RNA 1220, humanhuman

TSL 1 (best) BASIC

Gene LINC01220, Length 715 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01220-201ENST00000558575 CLEC4EQ9ULY5 219 aa16.06■□□□□ 0.16
LINC01220-201ENST00000558575 ANTXRLA6NF34 631 aa16.05■□□□□ 0.16
LINC01220-201ENST00000558575 CCP110O43303 1012 aa16.05■□□□□ 0.16
LINC01220-201ENST00000558575 PAGE1O75459 146 aa16.05■□□□□ 0.16
LINC01220-201ENST00000558575 LCA5LO95447 670 aa16.05■□□□□ 0.16
LINC01220-201ENST00000558575 ADH1CP00326 375 aa16.05■□□□□ 0.16
LINC01220-201ENST00000558575 PENKP01210 267 aaPredicted RBP16.05■□□□□ 0.16
LINC01220-201ENST00000558575 CHKAP35790 457 aa16.05■□□□□ 0.16
LINC01220-201ENST00000558575 SLC11A2P49281 568 aa16.05■□□□□ 0.16
LINC01220-201ENST00000558575 CCINQ13939 588 aa16.05■□□□□ 0.16
LINC01220-201ENST00000558575 PON2Q15165 354 aa16.05■□□□□ 0.16
LINC01220-201ENST00000558575 CDO1Q16878 200 aa16.05■□□□□ 0.16
LINC01220-201ENST00000558575 ANO4Q32M45 955 aa16.05■□□□□ 0.16
LINC01220-201ENST00000558575 TMEM196Q5HYL7 178 aa16.05■□□□□ 0.16
LINC01220-201ENST00000558575 DGKKQ5KSL6 1271 aa16.05■□□□□ 0.16
LINC01220-201ENST00000558575 PIK3R6Q5UE93 754 aa16.05■□□□□ 0.16
LINC01220-201ENST00000558575 FSTL4Q6MZW2 842 aa16.05■□□□□ 0.16
LINC01220-201ENST00000558575 DCUN1D2Q6PH85 259 aa16.05■□□□□ 0.16
LINC01220-201ENST00000558575 STRADAQ7RTN6 431 aa16.05■□□□□ 0.16
LINC01220-201ENST00000558575 C14orf80Q86SX3 495 aa16.05■□□□□ 0.16
LINC01220-201ENST00000558575 FAM131BQ86XD5 332 aa16.05■□□□□ 0.16
LINC01220-201ENST00000558575 PHTF2Q8N3S3 785 aa16.05■□□□□ 0.16
LINC01220-201ENST00000558575 BHMTQ93088 406 aa16.05■□□□□ 0.16
LINC01220-201ENST00000558575 TRIM11Q96F44 468 aa16.05■□□□□ 0.16
LINC01220-201ENST00000558575 ZC3H10Q96K80 434 aaKnown RBP16.05■□□□□ 0.16
LINC01220-201ENST00000558575 BTN2A3PQ96KV6 586 aa16.05■□□□□ 0.16
LINC01220-201ENST00000558575 CNPY3Q9BT09 278 aa16.05■□□□□ 0.16
LINC01220-201ENST00000558575 BBS2Q9BXC9 721 aa16.05■□□□□ 0.16
LINC01220-201ENST00000558575 TKTL2Q9H0I9 626 aa16.05■□□□□ 0.16
LINC01220-201ENST00000558575 DEF6Q9H4E7 631 aa16.05■□□□□ 0.16
LINC01220-201ENST00000558575 WDCPQ9H6R7 721 aa16.05■□□□□ 0.16
LINC01220-201ENST00000558575 FBXO10Q9UK96 956 aa16.05■□□□□ 0.16
LINC01220-201ENST00000558575 SNX10Q9Y5X0 201 aa16.05■□□□□ 0.16
LINC01220-201ENST00000558575 TENM4Q6N022 2769 aa16.04■□□□□ 0.16
LINC01220-201ENST00000558575 PLXNB3Q9ULL4 1909 aa16.04■□□□□ 0.16
LINC01220-201ENST00000558575 APC2O95996 2303 aa16.04■□□□□ 0.16
LINC01220-201ENST00000558575 LNP1A1A4G5 178 aa16.04■□□□□ 0.16
LINC01220-201ENST00000558575 SOWAHDA6NJG2 315 aa16.04■□□□□ 0.16
LINC01220-201ENST00000558575 HYAL3O43820 417 aaPredicted RBP16.04■□□□□ 0.16
LINC01220-201ENST00000558575 APOEP02649 317 aa16.04■□□□□ 0.16
LINC01220-201ENST00000558575 H2AFZP0C0S5 128 aa16.04■□□□□ 0.16
LINC01220-201ENST00000558575 CISD3P0C7P0 127 aa16.04■□□□□ 0.16
LINC01220-201ENST00000558575 SLC2A3P11169 496 aa16.04■□□□□ 0.16
LINC01220-201ENST00000558575 TYRP14679 529 aa16.04■□□□□ 0.16
LINC01220-201ENST00000558575 RDXP35241 583 aaKnown RBP16.04■□□□□ 0.16
LINC01220-201ENST00000558575 MS4A13Q5J8X5 152 aa16.04■□□□□ 0.16
LINC01220-201ENST00000558575 BRMS1LQ5PSV4 323 aa16.04■□□□□ 0.16
LINC01220-201ENST00000558575 RAP1GAP2Q684P5 730 aa16.04■□□□□ 0.16
LINC01220-201ENST00000558575 RAD9BQ6WBX8 426 aa16.04■□□□□ 0.16
LINC01220-201ENST00000558575 H2AFVQ71UI9 128 aa16.04■□□□□ 0.16
LINC01220-201ENST00000558575 TMTC1Q8IUR5 882 aa16.04■□□□□ 0.16
LINC01220-201ENST00000558575 SFTPA1Q8IWL2 248 aa16.04■□□□□ 0.16
LINC01220-201ENST00000558575 ATP6V0D2Q8N8Y2 350 aa16.04■□□□□ 0.16
LINC01220-201ENST00000558575 FAM172AQ8WUF8 416 aa16.04■□□□□ 0.16
LINC01220-201ENST00000558575 RNF34Q969K3 372 aa16.04■□□□□ 0.16
LINC01220-201ENST00000558575 TMA16Q96EY4 203 aaKnown RBP16.04■□□□□ 0.16
LINC01220-201ENST00000558575 MSANTD3Q96H12 275 aa16.04■□□□□ 0.16
LINC01220-201ENST00000558575 PRICKLE1Q96MT3 831 aaPredicted RBP16.04■□□□□ 0.16
LINC01220-201ENST00000558575 P2RY13Q9BPV8 354 aa16.04■□□□□ 0.16
LINC01220-201ENST00000558575 HS3ST4Q9Y661 456 aa16.04■□□□□ 0.16
LINC01220-201ENST00000558575 EPN1Q9Y6I3 576 aaPredicted RBP16.04■□□□□ 0.16
LINC01220-201ENST00000558575 A0A0A0MRY4 1105 aa16.03■□□□□ 0.16
LINC01220-201ENST00000558575 NEDD8-MDP1E9PL57 170 aa16.03■□□□□ 0.16
LINC01220-201ENST00000558575 CACNG3O60359 315 aa16.03■□□□□ 0.16
LINC01220-201ENST00000558575 TULP3O75386 442 aa16.03■□□□□ 0.16
LINC01220-201ENST00000558575 CEACAM1P13688 526 aa16.03■□□□□ 0.16
LINC01220-201ENST00000558575 CSRP1P21291 193 aaKnown RBP16.03■□□□□ 0.16
LINC01220-201ENST00000558575 TACR2P21452 398 aa16.03■□□□□ 0.16
LINC01220-201ENST00000558575 ADRA1BP35368 520 aa16.03■□□□□ 0.16
LINC01220-201ENST00000558575 GGCXP38435 758 aa16.03■□□□□ 0.16
LINC01220-201ENST00000558575 RPS24P62847 133 aaKnown RBP16.03■□□□□ 0.16
LINC01220-201ENST00000558575 PLK5Q496M5 336 aa16.03■□□□□ 0.16
LINC01220-201ENST00000558575 MPPE1Q53F39 396 aa16.03■□□□□ 0.16
LINC01220-201ENST00000558575 CCDC170Q8IYT3 715 aa16.03■□□□□ 0.16
LINC01220-201ENST00000558575 ZNF683Q8IZ20 524 aa16.03■□□□□ 0.16
LINC01220-201ENST00000558575 FNIP1Q8TF40 1166 aa16.03■□□□□ 0.16
LINC01220-201ENST00000558575 CD101Q93033 1021 aa16.03■□□□□ 0.16
LINC01220-201ENST00000558575 BTBD6Q96KE9 485 aa16.03■□□□□ 0.16
LINC01220-201ENST00000558575 NUP85Q9BW27 656 aa16.03■□□□□ 0.16
LINC01220-201ENST00000558575 DUSP15Q9H1R2 295 aaPredicted RBP16.03■□□□□ 0.16
LINC01220-201ENST00000558575 MRPL47Q9HD33 250 aaKnown RBP16.03■□□□□ 0.16
LINC01220-201ENST00000558575 SLC12A6Q9UHW9 1150 aa16.03■□□□□ 0.16
LINC01220-201ENST00000558575 KLK13Q9UKR3 277 aa16.03■□□□□ 0.16
LINC01220-201ENST00000558575 NEUROG3Q9Y4Z2 214 aa16.03■□□□□ 0.16
LINC01220-201ENST00000558575 SCINQ9Y6U3 715 aa16.03■□□□□ 0.16
LINC01220-201ENST00000558575 CEP192Q8TEP8 1941 aa16.03■□□□□ 0.16
LINC01220-201ENST00000558575 CCDC163A0A0D9SF12 145 aa16.02■□□□□ 0.16
LINC01220-201ENST00000558575 EGFP01133 1207 aa16.02■□□□□ 0.16
LINC01220-201ENST00000558575 TMEM253P0C7T8 217 aa16.02■□□□□ 0.16
LINC01220-201ENST00000558575 CHRM1P11229 460 aaPredicted RBP16.02■□□□□ 0.16
LINC01220-201ENST00000558575 HOXD9P28356 352 aaPredicted RBP16.02■□□□□ 0.16
LINC01220-201ENST00000558575 IRAK1P51617 712 aa16.02■□□□□ 0.16
LINC01220-201ENST00000558575 AMPD2Q01433 879 aa16.02■□□□□ 0.16
LINC01220-201ENST00000558575 AUHQ13825 339 aaKnown RBP16.02■□□□□ 0.16
LINC01220-201ENST00000558575 DAB2IPQ5VWQ8 1189 aa16.02■□□□□ 0.16
LINC01220-201ENST00000558575 FBXL22Q6P050 247 aa16.02■□□□□ 0.16
LINC01220-201ENST00000558575 C1orf228Q6PIY5 440 aa16.02■□□□□ 0.16
LINC01220-201ENST00000558575 C19orf48Q6RUI8 117 aa16.02■□□□□ 0.16
LINC01220-201ENST00000558575 SND1Q7KZF4 910 aaKnown RBP eCLIP16.02■□□□□ 0.16
LINC01220-201ENST00000558575 LGI2Q8N0V4 545 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms