RNA–Protein interactions for RNA: ENST00000558562.1

TMED3-205, Transcript of transmembrane p24 trafficking protein 3, humanhuman

TSL 2

Gene TMED3, Length 938 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED3-205ENST00000558562 RLN3Q8WXF3 142 aa13.99□□□□□ -0.17
TMED3-205ENST00000558562 EXOC4Q96A65 974 aa13.99□□□□□ -0.17
TMED3-205ENST00000558562 HSFY1Q96LI6 401 aa13.99□□□□□ -0.17
TMED3-205ENST00000558562 SLC22A12Q96S37 553 aa13.99□□□□□ -0.17
TMED3-205ENST00000558562 DUSP16Q9BY84 665 aa13.99□□□□□ -0.17
TMED3-205ENST00000558562 B3GNT5Q9BYG0 378 aa13.99□□□□□ -0.17
TMED3-205ENST00000558562 KRT82Q9NSB4 513 aa13.99□□□□□ -0.17
TMED3-205ENST00000558562 TMLHEQ9NVH6 421 aa13.99□□□□□ -0.17
TMED3-205ENST00000558562 ZMYM5Q9UJ78 669 aa13.99□□□□□ -0.17
TMED3-205ENST00000558562 LOC400499M0QZD8 3231 aa13.99□□□□□ -0.17
TMED3-205ENST00000558562 SMG1Q96Q15 3661 aaKnown RBP13.99□□□□□ -0.17
TMED3-205ENST00000558562 CCDC151A5D8V7 595 aa13.98□□□□□ -0.17
TMED3-205ENST00000558562 TAF4O00268 1085 aa13.98□□□□□ -0.17
TMED3-205ENST00000558562 PAPSS1O43252 624 aaPredicted RBP13.98□□□□□ -0.17
TMED3-205ENST00000558562 ERLIN1O75477 346 aa13.98□□□□□ -0.17
TMED3-205ENST00000558562 LCP1P13796 627 aa13.98□□□□□ -0.17
TMED3-205ENST00000558562 DDX6P26196 483 aaKnown RBP eCLIP13.98□□□□□ -0.17
TMED3-205ENST00000558562 SCNN1AP37088 669 aa13.98□□□□□ -0.17
TMED3-205ENST00000558562 IFNAR2P48551 515 aa13.98□□□□□ -0.17
TMED3-205ENST00000558562 RPL34P49207 117 aaKnown RBP13.98□□□□□ -0.17
TMED3-205ENST00000558562 SIM1P81133 766 aaPredicted RBP13.98□□□□□ -0.17
TMED3-205ENST00000558562 EML3Q32P44 896 aa13.98□□□□□ -0.17
TMED3-205ENST00000558562 INTS6LQ5JSJ4 861 aaKnown RBP13.98□□□□□ -0.17
TMED3-205ENST00000558562 ZFYVE27Q5T4F4 411 aa13.98□□□□□ -0.17
TMED3-205ENST00000558562 LRRC38Q5VT99 294 aa13.98□□□□□ -0.17
TMED3-205ENST00000558562 WDR93Q6P2C0 686 aa13.98□□□□□ -0.17
TMED3-205ENST00000558562 TMCO3Q6UWJ1 677 aa13.98□□□□□ -0.17
TMED3-205ENST00000558562 ADAT2Q7Z6V5 191 aaKnown RBP13.98□□□□□ -0.17
TMED3-205ENST00000558562 C11orf74Q86VG3 221 aa13.98□□□□□ -0.17
TMED3-205ENST00000558562 CCDC50Q8IVM0 306 aa13.98□□□□□ -0.17
TMED3-205ENST00000558562 FRMD1Q8N878 549 aa13.98□□□□□ -0.17
TMED3-205ENST00000558562 EXD1Q8NHP7 514 aa13.98□□□□□ -0.17
TMED3-205ENST00000558562 MYCBPAPQ8TBZ2 947 aa13.98□□□□□ -0.17
TMED3-205ENST00000558562 USP33Q8TEY7 942 aa13.98□□□□□ -0.17
TMED3-205ENST00000558562 C2orf15Q8WU43 125 aaKnown RBP13.98□□□□□ -0.17
TMED3-205ENST00000558562 MAIP1Q8WWC4 291 aa13.98□□□□□ -0.17
TMED3-205ENST00000558562 ATP2A3Q93084 1043 aa13.98□□□□□ -0.17
TMED3-205ENST00000558562 MYLPFQ96A32 169 aa13.98□□□□□ -0.17
TMED3-205ENST00000558562 RBM41Q96IZ5 413 aaKnown RBP13.98□□□□□ -0.17
TMED3-205ENST00000558562 PIWIL1Q96J94 861 aaKnown RBP13.98□□□□□ -0.17
TMED3-205ENST00000558562 LINC00597Q9H2U6 94 aa13.98□□□□□ -0.17
TMED3-205ENST00000558562 SLC32A1Q9H598 525 aa13.98□□□□□ -0.17
TMED3-205ENST00000558562 FSCN3Q9NQT6 498 aa13.98□□□□□ -0.17
TMED3-205ENST00000558562 TMEM74BQ9NUR3 256 aa13.98□□□□□ -0.17
TMED3-205ENST00000558562 ASNSD1Q9NWL6 643 aa13.98□□□□□ -0.17
TMED3-205ENST00000558562 MSRB2Q9Y3D2 182 aa13.98□□□□□ -0.17
TMED3-205ENST00000558562 SETXQ7Z333 2677 aaKnown RBP13.98□□□□□ -0.17
TMED3-205ENST00000558562 ATXN2Q99700 1313 aaKnown RBP13.97□□□□□ -0.17
TMED3-205ENST00000558562 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.97□□□□□ -0.17
TMED3-205ENST00000558562 C2CD4BA6NLJ0 364 aa13.97□□□□□ -0.17
TMED3-205ENST00000558562 K7EQS6 105 aa13.97□□□□□ -0.17
TMED3-205ENST00000558562 RAD51CO43502 376 aa13.97□□□□□ -0.17
TMED3-205ENST00000558562 PHF2O75151 1096 aa13.97□□□□□ -0.17
TMED3-205ENST00000558562 AP1G2O75843 785 aa13.97□□□□□ -0.17
TMED3-205ENST00000558562 GABBR2O75899 941 aa13.97□□□□□ -0.17
TMED3-205ENST00000558562 RNF8O76064 485 aa13.97□□□□□ -0.17
TMED3-205ENST00000558562 TCF4P15884 667 aa13.97□□□□□ -0.17
TMED3-205ENST00000558562 DESP17661 470 aa13.97□□□□□ -0.17
TMED3-205ENST00000558562 ENGP17813 658 aa13.97□□□□□ -0.17
TMED3-205ENST00000558562 CETN2P41208 172 aa13.97□□□□□ -0.17
TMED3-205ENST00000558562 PTGER3P43115 390 aa13.97□□□□□ -0.17
TMED3-205ENST00000558562 MRPS25P82663 173 aaKnown RBP13.97□□□□□ -0.17
TMED3-205ENST00000558562 TSPY1Q01534 308 aa13.97□□□□□ -0.17
TMED3-205ENST00000558562 SLC7A5Q01650 507 aa13.97□□□□□ -0.17
TMED3-205ENST00000558562 ZNF77Q15935 545 aa13.97□□□□□ -0.17
TMED3-205ENST00000558562 DDR2Q16832 855 aa13.97□□□□□ -0.17
TMED3-205ENST00000558562 HADHQ16836 314 aaKnown RBP13.97□□□□□ -0.17
TMED3-205ENST00000558562 C19orf48Q6RUI8 117 aa13.97□□□□□ -0.17
TMED3-205ENST00000558562 CLEC20AQ6ZU45 233 aa13.97□□□□□ -0.17
TMED3-205ENST00000558562 PAQR9Q6ZVX9 377 aa13.97□□□□□ -0.17
TMED3-205ENST00000558562 SLC26A9Q7LBE3 791 aa13.97□□□□□ -0.17
TMED3-205ENST00000558562 PIGZQ86VD9 579 aa13.97□□□□□ -0.17
TMED3-205ENST00000558562 RASSF3Q86WH2 238 aa13.97□□□□□ -0.17
TMED3-205ENST00000558562 TMEFF1Q8IYR6 380 aa13.97□□□□□ -0.17
TMED3-205ENST00000558562 CCDC26Q8TAB7 109 aa13.97□□□□□ -0.17
TMED3-205ENST00000558562 RXFP2Q8WXD0 754 aa13.97□□□□□ -0.17
TMED3-205ENST00000558562 PCED1BQ96HM7 432 aa13.97□□□□□ -0.17
TMED3-205ENST00000558562 ACBD6Q9BR61 282 aa13.97□□□□□ -0.17
TMED3-205ENST00000558562 CNPY3Q9BT09 278 aa13.97□□□□□ -0.17
TMED3-205ENST00000558562 NUSAP1Q9BXS6 441 aaKnown RBP13.97□□□□□ -0.17
TMED3-205ENST00000558562 DDX47Q9H0S4 455 aaKnown RBP13.97□□□□□ -0.17
TMED3-205ENST00000558562 DDX56Q9NY93 547 aaKnown RBP13.97□□□□□ -0.17
TMED3-205ENST00000558562 STIM2Q9P246 746 aa13.97□□□□□ -0.17
TMED3-205ENST00000558562 PCDHB5Q9Y5E4 795 aa13.97□□□□□ -0.17
TMED3-205ENST00000558562 PI4KAP42356 2102 aa13.96□□□□□ -0.17
TMED3-205ENST00000558562 CELSR3Q9NYQ7 3312 aa13.96□□□□□ -0.17
TMED3-205ENST00000558562 MAP3K13O43283 966 aa13.96□□□□□ -0.17
TMED3-205ENST00000558562 LRCH4O75427 683 aa13.96□□□□□ -0.17
TMED3-205ENST00000558562 GRAP2O75791 330 aa13.96□□□□□ -0.17
TMED3-205ENST00000558562 HEXIM1O94992 359 aaKnown RBP13.96□□□□□ -0.17
TMED3-205ENST00000558562 ZRANB2O95218 330 aaKnown RBP eCLIP13.96□□□□□ -0.17
TMED3-205ENST00000558562 CKMP06732 381 aa13.96□□□□□ -0.17
TMED3-205ENST00000558562 CSH1P0DML2 217 aa13.96□□□□□ -0.17
TMED3-205ENST00000558562 CSH2P0DML3 217 aa13.96□□□□□ -0.17
TMED3-205ENST00000558562 HNRNPLP14866 589 aaKnown RBP eCLIP13.96□□□□□ -0.173e-7■■■□□ 14.8
TMED3-205ENST00000558562 PDGFRAP16234 1089 aa13.96□□□□□ -0.17
TMED3-205ENST00000558562 FLT3P36888 993 aa13.96□□□□□ -0.17
TMED3-205ENST00000558562 ZNF143P52747 638 aaPredicted RBP13.96□□□□□ -0.17
TMED3-205ENST00000558562 SLC25A11Q02978 314 aaKnown RBP13.96□□□□□ -0.17
TMED3-205ENST00000558562 ADIGQ0VDE8 80 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms