RNA–Protein interactions for RNA: ENST00000558532.1

HERC1-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-203ENST00000558532 SAAL1Q96ER3 474 aa3.47□□□□□ -1.85
HERC1-203ENST00000558532 KAZALD1Q96I82 304 aa3.47□□□□□ -1.85
HERC1-203ENST00000558532 RSRC1Q96IZ7 334 aaKnown RBP3.47□□□□□ -1.85
HERC1-203ENST00000558532 C8orf76Q96K31 380 aa3.47□□□□□ -1.85
HERC1-203ENST00000558532 ATP6V1G3Q96LB4 118 aa3.47□□□□□ -1.85
HERC1-203ENST00000558532 SLC46A1Q96NT5 459 aa3.47□□□□□ -1.85
HERC1-203ENST00000558532 ZIM3Q96PE6 472 aa3.47□□□□□ -1.85
HERC1-203ENST00000558532 CRAMP1Q96RY5 1269 aa3.47□□□□□ -1.85
HERC1-203ENST00000558532 CCT8L2Q96SF2 557 aa3.47□□□□□ -1.85
HERC1-203ENST00000558532 SEC62Q99442 399 aaKnown RBP3.47□□□□□ -1.85
HERC1-203ENST00000558532 P2RX7Q99572 595 aaKnown RBP3.47□□□□□ -1.85
HERC1-203ENST00000558532 HEPHQ9BQS7 1158 aa3.47□□□□□ -1.85
HERC1-203ENST00000558532 FSD1Q9BTV5 496 aa3.47□□□□□ -1.85
HERC1-203ENST00000558532 SPATA5L1Q9BVQ7 753 aa3.47□□□□□ -1.85
HERC1-203ENST00000558532 AMBRA1Q9C0C7 1298 aa3.47□□□□□ -1.85
HERC1-203ENST00000558532 TTYH3Q9C0H2 523 aa3.47□□□□□ -1.85
HERC1-203ENST00000558532 SIL1Q9H173 461 aa3.47□□□□□ -1.85
HERC1-203ENST00000558532 ZMAT3Q9HA38 289 aaKnown RBP3.47□□□□□ -1.85
HERC1-203ENST00000558532 NOD2Q9HC29 1040 aa3.47□□□□□ -1.85
HERC1-203ENST00000558532 SARS2Q9NP81 518 aaKnown RBP3.47□□□□□ -1.85
HERC1-203ENST00000558532 LZTFL1Q9NQ48 299 aa3.47□□□□□ -1.85
HERC1-203ENST00000558532 SERHLQ9NQF3 203 aa3.47□□□□□ -1.85
HERC1-203ENST00000558532 HELLSQ9NRZ9 838 aa3.47□□□□□ -1.85
HERC1-203ENST00000558532 SAMSN1Q9NSI8 373 aaKnown RBP3.47□□□□□ -1.85
HERC1-203ENST00000558532 CTNNAL1Q9UBT7 734 aa3.47□□□□□ -1.85
HERC1-203ENST00000558532 CPA4Q9UI42 421 aa3.47□□□□□ -1.85
HERC1-203ENST00000558532 TLK1Q9UKI8 766 aa3.47□□□□□ -1.85
HERC1-203ENST00000558532 G3BP2Q9UN86 482 aaKnown RBP3.47□□□□□ -1.85
HERC1-203ENST00000558532 INSL6Q9Y581 213 aa3.47□□□□□ -1.85
HERC1-203ENST00000558532 UTP18Q9Y5J1 556 aaKnown RBP eCLIP3.47□□□□□ -1.85
HERC1-203ENST00000558532 RAD54BQ9Y620 910 aa3.47□□□□□ -1.85
HERC1-203ENST00000558532 RPS6KL1Q9Y6S9 549 aa3.47□□□□□ -1.85
HERC1-203ENST00000558532 PXDNQ92626 1479 aa3.47□□□□□ -1.85
HERC1-203ENST00000558532 AFDNP55196 1824 aaKnown RBP3.47□□□□□ -1.85
HERC1-203ENST00000558532 AFF2P51816 1311 aa3.46□□□□□ -1.85
HERC1-203ENST00000558532 CHD4Q14839 1912 aa3.46□□□□□ -1.85
HERC1-203ENST00000558532 LTN1O94822 1766 aa3.46□□□□□ -1.86
HERC1-203ENST00000558532 GPR75-ASB3A0A0A6YYF3 556 aa3.46□□□□□ -1.86
HERC1-203ENST00000558532 ZNF233A6NK53 670 aa3.46□□□□□ -1.86
HERC1-203ENST00000558532 E7EWF7 191 aa3.46□□□□□ -1.86
HERC1-203ENST00000558532 PPIP5K2O43314 1243 aa3.46□□□□□ -1.86
HERC1-203ENST00000558532 TRIAP1O43715 76 aa3.46□□□□□ -1.86
HERC1-203ENST00000558532 KRT86O43790 486 aa3.46□□□□□ -1.86
HERC1-203ENST00000558532 HSF2BPO75031 334 aa3.46□□□□□ -1.86
HERC1-203ENST00000558532 LUC7L3O95232 432 aaKnown RBP3.46□□□□□ -1.86
HERC1-203ENST00000558532 LCA5LO95447 670 aa3.46□□□□□ -1.86
HERC1-203ENST00000558532 GRPP07492 148 aa3.46□□□□□ -1.86
HERC1-203ENST00000558532 VIMP08670 466 aaKnown RBP3.46□□□□□ -1.86
HERC1-203ENST00000558532 LINGO3P0C6S8 592 aa3.46□□□□□ -1.86
HERC1-203ENST00000558532 TCP1P17987 556 aaKnown RBP3.46□□□□□ -1.86
HERC1-203ENST00000558532 ITGALP20701 1170 aa3.46□□□□□ -1.86
HERC1-203ENST00000558532 CD6P30203 668 aa3.46□□□□□ -1.86
HERC1-203ENST00000558532 HNRNPH3P31942 346 aaKnown RBP3.46□□□□□ -1.86
HERC1-203ENST00000558532 GCKP35557 465 aa3.46□□□□□ -1.86
HERC1-203ENST00000558532 RFX5P48382 616 aaPredicted RBP3.46□□□□□ -1.86
HERC1-203ENST00000558532 KCNJ5P48544 419 aa3.46□□□□□ -1.86
HERC1-203ENST00000558532 CACNA2D1P54289 1103 aa3.46□□□□□ -1.86
HERC1-203ENST00000558532 LOXL3P58215 753 aa3.46□□□□□ -1.86
HERC1-203ENST00000558532 NXPH1P58417 271 aa3.46□□□□□ -1.86
HERC1-203ENST00000558532 EIF4A1P60842 406 aaKnown RBP3.46□□□□□ -1.86
HERC1-203ENST00000558532 ELF3P78545 371 aaPredicted RBP3.46□□□□□ -1.86
HERC1-203ENST00000558532 AKAP17AQ02040 695 aaKnown RBP3.46□□□□□ -1.86
HERC1-203ENST00000558532 BIRC3Q13489 604 aa3.46□□□□□ -1.86
HERC1-203ENST00000558532 ITIH4Q14624 930 aa3.46□□□□□ -1.86
HERC1-203ENST00000558532 KCNB1Q14721 858 aa3.46□□□□□ -1.86
HERC1-203ENST00000558532 TAF7Q15545 349 aaPredicted RBP3.46□□□□□ -1.86
HERC1-203ENST00000558532 RABL6Q3YEC7 729 aaPredicted RBP3.46□□□□□ -1.86
HERC1-203ENST00000558532 LONRF3Q496Y0 759 aa3.46□□□□□ -1.86
HERC1-203ENST00000558532 SPECC1Q5M775 1068 aa3.46□□□□□ -1.86
HERC1-203ENST00000558532 SPDYCQ5MJ68 293 aa3.46□□□□□ -1.86
HERC1-203ENST00000558532 TTC39AQ5SRH9 613 aa3.46□□□□□ -1.86
HERC1-203ENST00000558532 SLC9C2Q5TAH2 1124 aa3.46□□□□□ -1.86
HERC1-203ENST00000558532 AGBL2Q5U5Z8 902 aa3.46□□□□□ -1.86
HERC1-203ENST00000558532 STRIP1Q5VSL9 837 aa3.46□□□□□ -1.86
HERC1-203ENST00000558532 KAZNQ674X7 775 aa3.46□□□□□ -1.86
HERC1-203ENST00000558532 CAPRIN2Q6IMN6 1127 aaKnown RBP3.46□□□□□ -1.86
HERC1-203ENST00000558532 CCDC70Q6NSX1 233 aa3.46□□□□□ -1.86
HERC1-203ENST00000558532 WDR59Q6PJI9 974 aa3.46□□□□□ -1.86
HERC1-203ENST00000558532 TMEM108Q6UXF1 575 aa3.46□□□□□ -1.86
HERC1-203ENST00000558532 FAM43BQ6ZT52 329 aaPredicted RBP3.46□□□□□ -1.86
HERC1-203ENST00000558532 CCDC121Q6ZUS5 278 aa3.46□□□□□ -1.86
HERC1-203ENST00000558532 RD3Q7Z3Z2 195 aa3.46□□□□□ -1.86
HERC1-203ENST00000558532 GALNT15Q8N3T1 639 aa3.46□□□□□ -1.86
HERC1-203ENST00000558532 PDILTQ8N807 584 aa3.46□□□□□ -1.86
HERC1-203ENST00000558532 IL17REQ8NFR9 667 aa3.46□□□□□ -1.86
HERC1-203ENST00000558532 TRIM58Q8NG06 486 aa3.46□□□□□ -1.86
HERC1-203ENST00000558532 LINS1Q8NG48 757 aa3.46□□□□□ -1.86
HERC1-203ENST00000558532 CAGE1Q8TC20 777 aa3.46□□□□□ -1.86
HERC1-203ENST00000558532 PARD3BQ8TEW8 1205 aa3.46□□□□□ -1.86
HERC1-203ENST00000558532 RFKQ969G6 155 aa3.46□□□□□ -1.86
HERC1-203ENST00000558532 FAM136AQ96C01 138 aa3.46□□□□□ -1.86
HERC1-203ENST00000558532 SPDL1Q96EA4 605 aa3.46□□□□□ -1.86
HERC1-203ENST00000558532 RRP36Q96EU6 259 aaKnown RBP3.46□□□□□ -1.86
HERC1-203ENST00000558532 DTNBP1Q96EV8 351 aa3.46□□□□□ -1.86
HERC1-203ENST00000558532 PBKQ96KB5 322 aa3.46□□□□□ -1.86
HERC1-203ENST00000558532 ZNF570Q96NI8 536 aa3.46□□□□□ -1.86
HERC1-203ENST00000558532 ALS2CR12Q96Q35 445 aa3.46□□□□□ -1.86
HERC1-203ENST00000558532 GSDMAQ96QA5 445 aa3.46□□□□□ -1.86
HERC1-203ENST00000558532 SPAG5Q96R06 1193 aa3.46□□□□□ -1.86
HERC1-203ENST00000558532 DUSP26Q9BV47 211 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 131 ms