RNA–Protein interactions for RNA: ENST00000558347.5

TPM1-212, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,525 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-212ENST00000558347 TKTL1P51854 596 aa10.67□□□□□ -0.7
TPM1-212ENST00000558347 BCAT1P54687 386 aa10.67□□□□□ -0.7
TPM1-212ENST00000558347 BST2Q10589 180 aaKnown RBP10.67□□□□□ -0.7
TPM1-212ENST00000558347 DHX34Q14147 1143 aaKnown RBP10.67□□□□□ -0.7
TPM1-212ENST00000558347 HLTFQ14527 1009 aaKnown RBP eCLIP10.67□□□□□ -0.7
TPM1-212ENST00000558347 LAIR1Q6GTX8 287 aa10.67□□□□□ -0.7
TPM1-212ENST00000558347 LCLAT1Q6UWP7 414 aa10.67□□□□□ -0.7
TPM1-212ENST00000558347 Q6ZNB5 142 aa10.67□□□□□ -0.7
TPM1-212ENST00000558347 BHLHA9Q7RTU4 235 aa10.67□□□□□ -0.7
TPM1-212ENST00000558347 PHF13Q86YI8 300 aaPredicted RBP10.67□□□□□ -0.7
TPM1-212ENST00000558347 MIB1Q86YT6 1006 aa10.67□□□□□ -0.7
TPM1-212ENST00000558347 ZNF276Q8N554 614 aa10.67□□□□□ -0.7
TPM1-212ENST00000558347 CAMKK1Q8N5S9 505 aa10.67□□□□□ -0.7
TPM1-212ENST00000558347 TMEM35BQ8NCS4 154 aa10.67□□□□□ -0.7
TPM1-212ENST00000558347 UBA3Q8TBC4 463 aa10.67□□□□□ -0.7
TPM1-212ENST00000558347 SLC35G2Q8TBE7 412 aa10.67□□□□□ -0.7
TPM1-212ENST00000558347 BCAS4Q8TDM0 211 aa10.67□□□□□ -0.7
TPM1-212ENST00000558347 NDRG1Q92597 394 aaKnown RBP10.67□□□□□ -0.7
TPM1-212ENST00000558347 ACDQ96AP0 544 aa10.67□□□□□ -0.7
TPM1-212ENST00000558347 TRIM11Q96F44 468 aa10.67□□□□□ -0.7
TPM1-212ENST00000558347 P2RY11Q96G91 374 aa10.67□□□□□ -0.7
TPM1-212ENST00000558347 VCPIP1Q96JH7 1222 aa10.67□□□□□ -0.7
TPM1-212ENST00000558347 ULBP1Q9BZM6 244 aa10.67□□□□□ -0.7
TPM1-212ENST00000558347 PARD6AQ9NPB6 346 aa10.67□□□□□ -0.7
TPM1-212ENST00000558347 ZDHHC4Q9NPG8 344 aa10.67□□□□□ -0.7
TPM1-212ENST00000558347 ARHGEF4Q9NR80 690 aa10.67□□□□□ -0.7
TPM1-212ENST00000558347 CLIC5Q9NZA1 410 aa10.67□□□□□ -0.7
TPM1-212ENST00000558347 DNMT3LQ9UJW3 386 aa10.67□□□□□ -0.7
TPM1-212ENST00000558347 GMEB2Q9UKD1 530 aa10.67□□□□□ -0.7
TPM1-212ENST00000558347 RAB23Q9ULC3 237 aa10.67□□□□□ -0.7
TPM1-212ENST00000558347 PLAAQ9Y263 795 aa10.67□□□□□ -0.7
TPM1-212ENST00000558347 UTP11Q9Y3A2 253 aaKnown RBP10.67□□□□□ -0.7
TPM1-212ENST00000558347 A0A0A0MRY4 1105 aa10.66□□□□□ -0.7
TPM1-212ENST00000558347 CCDC163A0A0D9SF12 145 aa10.66□□□□□ -0.7
TPM1-212ENST00000558347 HOXC11O43248 304 aaPredicted RBP10.66□□□□□ -0.7
TPM1-212ENST00000558347 BUB1BO60566 1050 aaPredicted RBP10.66□□□□□ -0.7
TPM1-212ENST00000558347 TULP3O75386 442 aa10.66□□□□□ -0.7
TPM1-212ENST00000558347 STC2O76061 302 aa10.66□□□□□ -0.7
TPM1-212ENST00000558347 ZBED1O96006 694 aa10.66□□□□□ -0.7
TPM1-212ENST00000558347 APODP05090 189 aa10.66□□□□□ -0.7
TPM1-212ENST00000558347 CYP1A2P05177 515 aa10.66□□□□□ -0.7
TPM1-212ENST00000558347 MYZAPP0CAP1 466 aa10.66□□□□□ -0.7
TPM1-212ENST00000558347 MYBL1P10243 752 aa10.66□□□□□ -0.7
TPM1-212ENST00000558347 RALAP11233 206 aa10.66□□□□□ -0.7
TPM1-212ENST00000558347 HNRNPLP14866 589 aaKnown RBP eCLIP10.66□□□□□ -0.71e-7■■□□□ 12.2
TPM1-212ENST00000558347 TIE1P35590 1138 aa10.66□□□□□ -0.7
TPM1-212ENST00000558347 HSD17B3P37058 310 aa10.66□□□□□ -0.7
TPM1-212ENST00000558347 NSFP46459 744 aaKnown RBP10.66□□□□□ -0.7
TPM1-212ENST00000558347 ID4P47928 161 aa10.66□□□□□ -0.7
TPM1-212ENST00000558347 DRG2P55039 364 aaKnown RBP10.66□□□□□ -0.7
TPM1-212ENST00000558347 EIF3BP55884 814 aaKnown RBP10.66□□□□□ -0.7
TPM1-212ENST00000558347 SLC8A3P57103 927 aa10.66□□□□□ -0.7
TPM1-212ENST00000558347 C1QBPQ07021 282 aaKnown RBP10.66□□□□□ -0.7
TPM1-212ENST00000558347 EFEMP1Q12805 493 aa10.66□□□□□ -0.7
TPM1-212ENST00000558347 ANO4Q32M45 955 aa10.66□□□□□ -0.7
TPM1-212ENST00000558347 PKDCCQ504Y2 493 aa10.66□□□□□ -0.7
TPM1-212ENST00000558347 NAA35Q5VZE5 725 aa10.66□□□□□ -0.7
TPM1-212ENST00000558347 PM20D1Q6GTS8 502 aa10.66□□□□□ -0.7
TPM1-212ENST00000558347 TPGS1Q6ZTW0 290 aa10.66□□□□□ -0.7
TPM1-212ENST00000558347 MCOLN2Q8IZK6 566 aa10.66□□□□□ -0.7
TPM1-212ENST00000558347 CCDC33Q8N5R6 958 aa10.66□□□□□ -0.7
TPM1-212ENST00000558347 GAB3Q8WWW8 586 aa10.66□□□□□ -0.7
TPM1-212ENST00000558347 RMDN1Q96DB5 314 aa10.66□□□□□ -0.7
TPM1-212ENST00000558347 RUNDC3BQ96NL0 473 aa10.66□□□□□ -0.7
TPM1-212ENST00000558347 EPN3Q9H201 632 aa10.66□□□□□ -0.7
TPM1-212ENST00000558347 HESX1Q9UBX0 185 aa10.66□□□□□ -0.7
TPM1-212ENST00000558347 RASAL2Q9UJF2 1139 aa10.66□□□□□ -0.7
TPM1-212ENST00000558347 LSM7Q9UK45 103 aaKnown RBP10.66□□□□□ -0.7
TPM1-212ENST00000558347 MMP17Q9ULZ9 603 aa10.66□□□□□ -0.7
TPM1-212ENST00000558347 CEP83Q9Y592 693 aa10.66□□□□□ -0.7
TPM1-212ENST00000558347 NFS1Q9Y697 457 aa10.66□□□□□ -0.7
TPM1-212ENST00000558347 LAMA1P25391 3075 aa10.65□□□□□ -0.7
TPM1-212ENST00000558347 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.65□□□□□ -0.7
TPM1-212ENST00000558347 NEDD8-MDP1E9PL57 170 aa10.65□□□□□ -0.7
TPM1-212ENST00000558347 RPP40O75818 363 aaKnown RBP10.65□□□□□ -0.7
TPM1-212ENST00000558347 GABBR2O75899 941 aa10.65□□□□□ -0.7
TPM1-212ENST00000558347 KRT14P02533 472 aa10.65□□□□□ -0.7
TPM1-212ENST00000558347 KLKB1P03952 638 aa10.65□□□□□ -0.7
TPM1-212ENST00000558347 HMBSP08397 361 aa10.65□□□□□ -0.7
TPM1-212ENST00000558347 SETSIPP0DME0 302 aa10.65□□□□□ -0.7
TPM1-212ENST00000558347 GRIA2P42262 883 aa10.65□□□□□ -0.7
TPM1-212ENST00000558347 KIR2DL1P43626 348 aaPredicted RBP10.65□□□□□ -0.7
TPM1-212ENST00000558347 CCT5P48643 541 aa10.65□□□□□ -0.7
TPM1-212ENST00000558347 YWHAGP61981 247 aaKnown RBP eCLIP10.65□□□□□ -0.7
TPM1-212ENST00000558347 SPEM2Q0P670 501 aa10.65□□□□□ -0.7
TPM1-212ENST00000558347 ADIGQ0VDE8 80 aa10.65□□□□□ -0.7
TPM1-212ENST00000558347 BTBD8Q5XKL5 378 aa10.65□□□□□ -0.7
TPM1-212ENST00000558347 DENND1BQ6P3S1 775 aa10.65□□□□□ -0.7
TPM1-212ENST00000558347 TMEM92Q6UXU6 159 aa10.65□□□□□ -0.7
TPM1-212ENST00000558347 MICALCLQ6ZW33 695 aa10.65□□□□□ -0.7
TPM1-212ENST00000558347 CEP68Q76N32 757 aa10.65□□□□□ -0.7
TPM1-212ENST00000558347 MON1BQ7L1V2 547 aa10.65□□□□□ -0.7
TPM1-212ENST00000558347 TADA2BQ86TJ2 420 aa10.65□□□□□ -0.7
TPM1-212ENST00000558347 C10orf67Q8IYJ2 551 aa10.65□□□□□ -0.7
TPM1-212ENST00000558347 WDTC1Q8N5D0 677 aa10.65□□□□□ -0.7
TPM1-212ENST00000558347 FAM160A2Q8N612 972 aaPredicted RBP10.65□□□□□ -0.7
TPM1-212ENST00000558347 ALLCQ8N6M5 410 aa10.65□□□□□ -0.7
TPM1-212ENST00000558347 IL17RCQ8NAC3 791 aa10.65□□□□□ -0.7
TPM1-212ENST00000558347 TXNDC5Q8NBS9 432 aaKnown RBP10.65□□□□□ -0.7
TPM1-212ENST00000558347 CPA5Q8WXQ8 436 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms