RNA–Protein interactions for RNA: ENST00000558324.1

HERC1-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 828 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-202ENST00000558324 METTL12A8MUP2 240 aa12.3□□□□□ -0.44
HERC1-202ENST00000558324 TTC34A8MYJ7 566 aa12.3□□□□□ -0.44
HERC1-202ENST00000558324 OPHN1O60890 802 aa12.3□□□□□ -0.44
HERC1-202ENST00000558324 PAGE1O75459 146 aa12.3□□□□□ -0.44
HERC1-202ENST00000558324 SYPP08247 313 aa12.3□□□□□ -0.44
HERC1-202ENST00000558324 MZF1P28698 734 aaPredicted RBP12.3□□□□□ -0.44
HERC1-202ENST00000558324 NOS2P35228 1153 aa12.3□□□□□ -0.44
HERC1-202ENST00000558324 MATKP42679 507 aa12.3□□□□□ -0.44
HERC1-202ENST00000558324 POLR2FP61218 127 aaKnown RBP12.3□□□□□ -0.44
HERC1-202ENST00000558324 ECT2LQ008S8 904 aa12.3□□□□□ -0.44
HERC1-202ENST00000558324 GRIK2Q13002 908 aa12.3□□□□□ -0.44
HERC1-202ENST00000558324 AUHQ13825 339 aaKnown RBP12.3□□□□□ -0.44
HERC1-202ENST00000558324 STX1AQ16623 288 aa12.3□□□□□ -0.44
HERC1-202ENST00000558324 HNRNPA1L2Q32P51 320 aaKnown RBP12.3□□□□□ -0.44
HERC1-202ENST00000558324 FKBP15Q5T1M5 1219 aa12.3□□□□□ -0.44
HERC1-202ENST00000558324 NAA35Q5VZE5 725 aa12.3□□□□□ -0.44
HERC1-202ENST00000558324 FBXL22Q6P050 247 aa12.3□□□□□ -0.44
HERC1-202ENST00000558324 RBM43Q6ZSC3 357 aaKnown RBP12.3□□□□□ -0.44
HERC1-202ENST00000558324 ERICH1Q86X53 443 aa12.3□□□□□ -0.44
HERC1-202ENST00000558324 ZDHHC17Q8IUH5 632 aa12.3□□□□□ -0.44
HERC1-202ENST00000558324 ZNF397Q8NF99 534 aaPredicted RBP12.3□□□□□ -0.44
HERC1-202ENST00000558324 EPS8L1Q8TE68 723 aa12.3□□□□□ -0.44
HERC1-202ENST00000558324 SLC20A1Q8WUM9 679 aa12.3□□□□□ -0.44
HERC1-202ENST00000558324 CPA5Q8WXQ8 436 aa12.3□□□□□ -0.44
HERC1-202ENST00000558324 IGSF8Q969P0 613 aa12.3□□□□□ -0.44
HERC1-202ENST00000558324 C18orf8Q96DM3 657 aa12.3□□□□□ -0.44
HERC1-202ENST00000558324 PCMTD1Q96MG8 357 aaPredicted RBP12.3□□□□□ -0.44
HERC1-202ENST00000558324 STK33Q9BYT3 514 aa12.3□□□□□ -0.44
HERC1-202ENST00000558324 ADAM33Q9BZ11 813 aa12.3□□□□□ -0.44
HERC1-202ENST00000558324 BTBD1Q9H0C5 482 aa12.3□□□□□ -0.44
HERC1-202ENST00000558324 SIK2Q9H0K1 926 aa12.3□□□□□ -0.44
HERC1-202ENST00000558324 RSPH9Q9H1X1 276 aaPredicted RBP12.3□□□□□ -0.44
HERC1-202ENST00000558324 GANQ9H2C0 597 aa12.3□□□□□ -0.44
HERC1-202ENST00000558324 FBRSQ9HAH7 460 aa12.3□□□□□ -0.44
HERC1-202ENST00000558324 NLRC4Q9NPP4 1024 aa12.3□□□□□ -0.44
HERC1-202ENST00000558324 PIGVQ9NUD9 493 aa12.3□□□□□ -0.44
HERC1-202ENST00000558324 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.3□□□□□ -0.44
HERC1-202ENST00000558324 SLCO3A1Q9UIG8 710 aa12.3□□□□□ -0.44
HERC1-202ENST00000558324 STAP1Q9ULZ2 295 aa12.3□□□□□ -0.44
HERC1-202ENST00000558324 SNX10Q9Y5X0 201 aa12.3□□□□□ -0.44
HERC1-202ENST00000558324 HS3ST4Q9Y661 456 aa12.3□□□□□ -0.44
HERC1-202ENST00000558324 PCDH15Q96QU1 1955 aa12.29□□□□□ -0.44
HERC1-202ENST00000558324 A0A1B0GTW7 788 aa12.29□□□□□ -0.44
HERC1-202ENST00000558324 FAM47DPA6NHR8 397 aa12.29□□□□□ -0.44
HERC1-202ENST00000558324 EPHB6O15197 1021 aa12.29□□□□□ -0.44
HERC1-202ENST00000558324 BCAT2O15382 392 aaPredicted RBP12.29□□□□□ -0.44
HERC1-202ENST00000558324 FSBPO95073 299 aa12.29□□□□□ -0.44
HERC1-202ENST00000558324 ADCY5O95622 1261 aa12.29□□□□□ -0.44
HERC1-202ENST00000558324 SEMA4FO95754 770 aa12.29□□□□□ -0.44
HERC1-202ENST00000558324 SRPRAP08240 638 aaKnown RBP12.29□□□□□ -0.44
HERC1-202ENST00000558324 CSRP1P21291 193 aaKnown RBP12.29□□□□□ -0.44
HERC1-202ENST00000558324 PMLP29590 882 aa12.29□□□□□ -0.44
HERC1-202ENST00000558324 CDH5P33151 784 aaPredicted RBP12.29□□□□□ -0.44
HERC1-202ENST00000558324 FLT3P36888 993 aa12.29□□□□□ -0.44
HERC1-202ENST00000558324 PSMD8P48556 350 aa12.29□□□□□ -0.44
HERC1-202ENST00000558324 ZBTB16Q05516 673 aa12.29□□□□□ -0.44
HERC1-202ENST00000558324 DEUP1Q05D60 604 aa12.29□□□□□ -0.44
HERC1-202ENST00000558324 FOXC1Q12948 553 aa12.29□□□□□ -0.44
HERC1-202ENST00000558324 CST6Q15828 149 aa12.29□□□□□ -0.44
HERC1-202ENST00000558324 TTC39BQ5VTQ0 682 aaPredicted RBP12.29□□□□□ -0.44
HERC1-202ENST00000558324 SMYD5Q6GMV2 418 aa12.29□□□□□ -0.44
HERC1-202ENST00000558324 CXorf57Q6NSI4 855 aaKnown RBP12.29□□□□□ -0.44
HERC1-202ENST00000558324 PHLDB2Q86SQ0 1253 aa12.29□□□□□ -0.44
HERC1-202ENST00000558324 C14orf80Q86SX3 495 aa12.29□□□□□ -0.44
HERC1-202ENST00000558324 XYLT1Q86Y38 959 aa12.29□□□□□ -0.44
HERC1-202ENST00000558324 MMAAQ8IVH4 418 aaKnown RBP12.29□□□□□ -0.44
HERC1-202ENST00000558324 DNASE2BQ8WZ79 361 aa12.29□□□□□ -0.44
HERC1-202ENST00000558324 TBCBQ99426 244 aa12.29□□□□□ -0.44
HERC1-202ENST00000558324 NPY6RQ99463 290 aa12.29□□□□□ -0.44
HERC1-202ENST00000558324 TKTL2Q9H0I9 626 aa12.29□□□□□ -0.44
HERC1-202ENST00000558324 PABPC3Q9H361 631 aaKnown RBP12.29□□□□□ -0.44
HERC1-202ENST00000558324 SLC32A1Q9H598 525 aa12.29□□□□□ -0.44
HERC1-202ENST00000558324 ANLNQ9NQW6 1124 aa12.29□□□□□ -0.44
HERC1-202ENST00000558324 TMPRSS4Q9NRS4 437 aa12.29□□□□□ -0.44
HERC1-202ENST00000558324 ANO10Q9NW15 660 aa12.29□□□□□ -0.44
HERC1-202ENST00000558324 SERGEFQ9UGK8 458 aa12.29□□□□□ -0.44
HERC1-202ENST00000558324 ANGPTL2Q9UKU9 493 aa12.29□□□□□ -0.44
HERC1-202ENST00000558324 SLCO1B1Q9Y6L6 691 aa12.29□□□□□ -0.44
HERC1-202ENST00000558324 ADAMTS9Q9P2N4 1935 aa12.29□□□□□ -0.44
HERC1-202ENST00000558324 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.28□□□□□ -0.44
HERC1-202ENST00000558324 EDDM13A0A1B0GTR0 161 aa12.28□□□□□ -0.44
HERC1-202ENST00000558324 SPAARA0A1B0GVQ0 90 aa12.28□□□□□ -0.44
HERC1-202ENST00000558324 A0A1W2PP55 124 aa12.28□□□□□ -0.44
HERC1-202ENST00000558324 MID1O15344 667 aa12.28□□□□□ -0.44
HERC1-202ENST00000558324 RNASEH1O60930 286 aaKnown RBP12.28□□□□□ -0.44
HERC1-202ENST00000558324 LSM8O95777 96 aaKnown RBP12.28□□□□□ -0.44
HERC1-202ENST00000558324 CEACAM1P13688 526 aa12.28□□□□□ -0.44
HERC1-202ENST00000558324 VAV1P15498 845 aa12.28□□□□□ -0.44
HERC1-202ENST00000558324 GABRB2P47870 512 aa12.28□□□□□ -0.44
HERC1-202ENST00000558324 COPB1P53618 953 aaKnown RBP12.28□□□□□ -0.44
HERC1-202ENST00000558324 NOMO3P69849 1222 aa12.28□□□□□ -0.44
HERC1-202ENST00000558324 MYL5Q02045 173 aa12.28□□□□□ -0.44
HERC1-202ENST00000558324 SEMA3BQ13214 749 aa12.28□□□□□ -0.44
HERC1-202ENST00000558324 ZNF177Q13360 481 aaPredicted RBP12.28□□□□□ -0.44
HERC1-202ENST00000558324 SYCP1Q15431 976 aa12.28□□□□□ -0.44
HERC1-202ENST00000558324 C9orf64Q5T6V5 341 aa12.28□□□□□ -0.44
HERC1-202ENST00000558324 SND1Q7KZF4 910 aaKnown RBP eCLIP12.28□□□□□ -0.44
HERC1-202ENST00000558324 STK40Q8N2I9 435 aa12.28□□□□□ -0.44
HERC1-202ENST00000558324 MSANTD4Q8NCY6 345 aa12.28□□□□□ -0.44
HERC1-202ENST00000558324 OR52K2Q8NGK3 314 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms