RNA–Protein interactions for RNA: ENST00000558072.5

TPM1-209, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-209ENST00000558072 FAM133BQ5BKY9 247 aaKnown RBP12.76□□□□□ -0.37
TPM1-209ENST00000558072 FAM78AQ5JUQ0 283 aa12.76□□□□□ -0.37
TPM1-209ENST00000558072 TIGD7Q6NT04 549 aaPredicted RBP12.76□□□□□ -0.37
TPM1-209ENST00000558072 C4orf22Q6V702 233 aa12.76□□□□□ -0.37
TPM1-209ENST00000558072 SYDE1Q6ZW31 735 aaPredicted RBP12.76□□□□□ -0.37
TPM1-209ENST00000558072 CDKL3Q8IVW4 592 aaPredicted RBP12.76□□□□□ -0.37
TPM1-209ENST00000558072 MFSD6LQ8IWD5 586 aa12.76□□□□□ -0.37
TPM1-209ENST00000558072 UMODL1-AS1Q8N2C9 162 aa12.76□□□□□ -0.37
TPM1-209ENST00000558072 PLD5Q8N7P1 536 aa12.76□□□□□ -0.37
TPM1-209ENST00000558072 C12orf50Q8NA57 414 aaPredicted RBP12.76□□□□□ -0.37
TPM1-209ENST00000558072 SPATA4Q8NEY3 305 aa12.76□□□□□ -0.37
TPM1-209ENST00000558072 ATL2Q8NHH9 583 aa12.76□□□□□ -0.37
TPM1-209ENST00000558072 ADAMTS19Q8TE59 1207 aa12.76□□□□□ -0.37
TPM1-209ENST00000558072 DDI1Q8WTU0 396 aa12.76□□□□□ -0.37
TPM1-209ENST00000558072 NSMCE1Q8WV22 266 aa12.76□□□□□ -0.37
TPM1-209ENST00000558072 OSCP1Q8WVF1 389 aa12.76□□□□□ -0.37
TPM1-209ENST00000558072 MAGOHBQ96A72 148 aaKnown RBP12.76□□□□□ -0.37
TPM1-209ENST00000558072 SLC2A11Q9BYW1 496 aa12.76□□□□□ -0.37
TPM1-209ENST00000558072 LRRC19Q9H756 370 aa12.76□□□□□ -0.37
TPM1-209ENST00000558072 DUS2Q9NX74 493 aaKnown RBP12.76□□□□□ -0.37
TPM1-209ENST00000558072 SNX10Q9Y5X0 201 aa12.76□□□□□ -0.37
TPM1-209ENST00000558072 COL4A3Q01955 1670 aa12.76□□□□□ -0.37
TPM1-209ENST00000558072 HEPACAM2A8MVW5 462 aa12.75□□□□□ -0.37
TPM1-209ENST00000558072 C2CD4DB7Z1M9 353 aa12.75□□□□□ -0.37
TPM1-209ENST00000558072 GREM1O60565 184 aa12.75□□□□□ -0.37
TPM1-209ENST00000558072 PHF2O75151 1096 aa12.75□□□□□ -0.37
TPM1-209ENST00000558072 GAS8O95995 478 aa12.75□□□□□ -0.37
TPM1-209ENST00000558072 TUBBP07437 444 aa12.75□□□□□ -0.37
TPM1-209ENST00000558072 PSMC3P17980 439 aa12.75□□□□□ -0.37
TPM1-209ENST00000558072 AMPD1P23109 780 aa12.75□□□□□ -0.37
TPM1-209ENST00000558072 OR1E1P30953 314 aa12.75□□□□□ -0.37
TPM1-209ENST00000558072 VIPR2P41587 438 aa12.75□□□□□ -0.37
TPM1-209ENST00000558072 GAD2Q05329 585 aa12.75□□□□□ -0.37
TPM1-209ENST00000558072 MMRN1Q13201 1228 aa12.75□□□□□ -0.37
TPM1-209ENST00000558072 BYSLQ13895 437 aaKnown RBP12.75□□□□□ -0.37
TPM1-209ENST00000558072 DHX34Q14147 1143 aaKnown RBP12.75□□□□□ -0.37
TPM1-209ENST00000558072 NADSYN1Q6IA69 706 aa12.75□□□□□ -0.37
TPM1-209ENST00000558072 PTCRAQ6ISU1 281 aaPredicted RBP12.75□□□□□ -0.37
TPM1-209ENST00000558072 NUDT18Q6ZVK8 323 aa12.75□□□□□ -0.37
TPM1-209ENST00000558072 BBS7Q8IWZ6 715 aa12.75□□□□□ -0.37
TPM1-209ENST00000558072 ZNF683Q8IZ20 524 aa12.75□□□□□ -0.37
TPM1-209ENST00000558072 PQLC3Q8N755 202 aa12.75□□□□□ -0.37
TPM1-209ENST00000558072 RSAD2Q8WXG1 361 aa12.75□□□□□ -0.37
TPM1-209ENST00000558072 NKD2Q969F2 451 aaPredicted RBP12.75□□□□□ -0.37
TPM1-209ENST00000558072 MS4A14Q96JA4 679 aa12.75□□□□□ -0.37
TPM1-209ENST00000558072 LRRC3BQ96PB8 259 aa12.75□□□□□ -0.37
TPM1-209ENST00000558072 XPO6Q96QU8 1125 aaKnown RBP12.75□□□□□ -0.37
TPM1-209ENST00000558072 KXD1Q9BQD3 176 aa12.75□□□□□ -0.37
TPM1-209ENST00000558072 PHF7Q9BWX1 381 aaPredicted RBP12.75□□□□□ -0.37
TPM1-209ENST00000558072 MAGEB5Q9BZ81 275 aa12.75□□□□□ -0.37
TPM1-209ENST00000558072 MAGEH1Q9H213 219 aa12.75□□□□□ -0.37
TPM1-209ENST00000558072 ANLNQ9NQW6 1124 aa12.75□□□□□ -0.37
TPM1-209ENST00000558072 SPHK2Q9NRA0 654 aa12.75□□□□□ -0.37
TPM1-209ENST00000558072 MARK1Q9P0L2 795 aa12.75□□□□□ -0.37
TPM1-209ENST00000558072 XPO7Q9UIA9 1087 aaKnown RBP12.75□□□□□ -0.37
TPM1-209ENST00000558072 HPCAL4Q9UM19 191 aa12.75□□□□□ -0.37
TPM1-209ENST00000558072 ILVBLA1L0T0 632 aa12.74□□□□□ -0.37
TPM1-209ENST00000558072 ZSCAN5CA6NGD5 496 aaPredicted RBP12.74□□□□□ -0.37
TPM1-209ENST00000558072 EFCAB8A8MWE9 144 aa12.74□□□□□ -0.37
TPM1-209ENST00000558072 FAM72CH0Y354 149 aa12.74□□□□□ -0.37
TPM1-209ENST00000558072 H0Y626 953 aa12.74□□□□□ -0.37
TPM1-209ENST00000558072 I6L893 689 aaPredicted RBP12.74□□□□□ -0.37
TPM1-209ENST00000558072 CHADO15335 359 aa12.74□□□□□ -0.37
TPM1-209ENST00000558072 RAMP2O60895 175 aa12.74□□□□□ -0.37
TPM1-209ENST00000558072 ITGAVP06756 1048 aa12.74□□□□□ -0.37
TPM1-209ENST00000558072 FCARP24071 287 aa12.74□□□□□ -0.37
TPM1-209ENST00000558072 GEMIN4P57678 1058 aaKnown RBP12.74□□□□□ -0.37
TPM1-209ENST00000558072 EIF3EP60228 445 aaKnown RBP12.74□□□□□ -0.37
TPM1-209ENST00000558072 DYNLT1P63172 113 aa12.74□□□□□ -0.37
TPM1-209ENST00000558072 FCHO2Q0JRZ9 810 aa12.74□□□□□ -0.37
TPM1-209ENST00000558072 CDH18Q13634 790 aa12.74□□□□□ -0.37
TPM1-209ENST00000558072 DMC1Q14565 340 aa12.74□□□□□ -0.37
TPM1-209ENST00000558072 NOMO1Q15155 1222 aa12.74□□□□□ -0.37
TPM1-209ENST00000558072 ANO4Q32M45 955 aa12.74□□□□□ -0.37
TPM1-209ENST00000558072 FAM72AQ5TYM5 149 aa12.74□□□□□ -0.37
TPM1-209ENST00000558072 NCBP2-AS2Q69YL0 99 aa12.74□□□□□ -0.37
TPM1-209ENST00000558072 FAM72DQ6L9T8 149 aa12.74□□□□□ -0.37
TPM1-209ENST00000558072 METTL3Q86U44 580 aaKnown RBP12.74□□□□□ -0.37
TPM1-209ENST00000558072 NLRP14Q86W24 1093 aa12.74□□□□□ -0.37
TPM1-209ENST00000558072 FAM72BQ86X60 149 aa12.74□□□□□ -0.37
TPM1-209ENST00000558072 CCDC105Q8IYK2 499 aa12.74□□□□□ -0.37
TPM1-209ENST00000558072 ZDHHC14Q8IZN3 488 aa12.74□□□□□ -0.37
TPM1-209ENST00000558072 BBS5Q8N3I7 341 aa12.74□□□□□ -0.37
TPM1-209ENST00000558072 CPA6Q8N4T0 437 aa12.74□□□□□ -0.37
TPM1-209ENST00000558072 MMGT1Q8N4V1 131 aa12.74□□□□□ -0.37
TPM1-209ENST00000558072 TFB1MQ8WVM0 346 aaKnown RBP12.74□□□□□ -0.37
TPM1-209ENST00000558072 IRF7Q92985 503 aa12.74□□□□□ -0.37
TPM1-209ENST00000558072 FATE1Q969F0 183 aa12.74□□□□□ -0.37
TPM1-209ENST00000558072 PPP1R2P1Q96PQ5 205 aa12.74□□□□□ -0.37
TPM1-209ENST00000558072 VAT1Q99536 393 aa12.74□□□□□ -0.37
TPM1-209ENST00000558072 RPP25Q9BUL9 199 aaKnown RBP12.74□□□□□ -0.37
TPM1-209ENST00000558072 CARD6Q9BX69 1037 aa12.74□□□□□ -0.37
TPM1-209ENST00000558072 PLA2G2FQ9BZM2 168 aa12.74□□□□□ -0.37
TPM1-209ENST00000558072 KIAA1522Q9P206 1035 aaPredicted RBP12.74□□□□□ -0.37
TPM1-209ENST00000558072 IGSF9Q9P2J2 1179 aa12.74□□□□□ -0.37
TPM1-209ENST00000558072 ZNF148Q9UQR1 794 aa12.74□□□□□ -0.37
TPM1-209ENST00000558072 TBC1D30Q9Y2I9 924 aa12.74□□□□□ -0.37
TPM1-209ENST00000558072 HEY1Q9Y5J3 304 aa12.74□□□□□ -0.37
TPM1-209ENST00000558072 GOLGA6L7A0A1B0GV03 622 aa12.73□□□□□ -0.37
TPM1-209ENST00000558072 FAM187AA6NFU0 413 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms